/dports/biology/py-pysam/pysam-0.18.0/htslib/ |
H A D | bcf_sr_sort.c | 306 hts_expand(char*,srt->noff,srt->mcharp,srt->charp); in grp_create_key() 309 srt->charp[i] = srt->str.s + srt->off[i]; in grp_create_key() 361 srt->ngrp = srt->nvar = srt->nvset = 0; in bcf_sr_sort_set() 384 srt->off[srt->noff++] = srt->str.l; in bcf_sr_sort_set() 439 hts_expand0(var_t,srt->nvar,srt->mvar,srt->var); in bcf_sr_sort_set() 467 hts_expand0(grp_t, srt->ngrp, srt->mgrp, srt->grp); in bcf_sr_sort_set() 535 hts_expand(int, srt->ngrp*srt->nvset, srt->mpmat, srt->pmat); in bcf_sr_sort_set() 536 hts_expand(int, srt->nvset, srt->mcnt, srt->cnt); in bcf_sr_sort_set() 537 memset(srt->pmat, 0, sizeof(*srt->pmat)*srt->ngrp*srt->nvset); in bcf_sr_sort_set() 595 if ( srt->msr < srt->nsr ) srt->msr = srt->nsr; in bcf_sr_sort_next() [all …]
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/dports/biology/htslib/htslib-1.14/ |
H A D | bcf_sr_sort.c | 306 hts_expand(char*,srt->noff,srt->mcharp,srt->charp); in grp_create_key() 309 srt->charp[i] = srt->str.s + srt->off[i]; in grp_create_key() 361 srt->ngrp = srt->nvar = srt->nvset = 0; in bcf_sr_sort_set() 384 srt->off[srt->noff++] = srt->str.l; in bcf_sr_sort_set() 439 hts_expand0(var_t,srt->nvar,srt->mvar,srt->var); in bcf_sr_sort_set() 467 hts_expand0(grp_t, srt->ngrp, srt->mgrp, srt->grp); in bcf_sr_sort_set() 535 hts_expand(int, srt->ngrp*srt->nvset, srt->mpmat, srt->pmat); in bcf_sr_sort_set() 536 hts_expand(int, srt->nvset, srt->mcnt, srt->cnt); in bcf_sr_sort_set() 537 memset(srt->pmat, 0, sizeof(*srt->pmat)*srt->ngrp*srt->nvset); in bcf_sr_sort_set() 595 if ( srt->msr < srt->nsr ) srt->msr = srt->nsr; in bcf_sr_sort_next() [all …]
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/dports/biology/vt/vt-0.57721/lib/htslib/ |
H A D | bcf_sr_sort.c | 313 hts_expand(char*,srt->noff,srt->mcharp,srt->charp); in grp_create_key() 316 srt->charp[i] = srt->str.s + srt->off[i]; in grp_create_key() 368 srt->ngrp = srt->nvar = srt->nvset = 0; in bcf_sr_sort_set() 391 srt->off[srt->noff++] = srt->str.l; in bcf_sr_sort_set() 426 hts_expand0(var_t,srt->nvar,srt->mvar,srt->var); in bcf_sr_sort_set() 454 hts_expand0(grp_t, srt->ngrp, srt->mgrp, srt->grp); in bcf_sr_sort_set() 514 hts_expand(int, srt->ngrp*srt->nvset, srt->mpmat, srt->pmat); in bcf_sr_sort_set() 515 hts_expand(int, srt->nvset, srt->mcnt, srt->cnt); in bcf_sr_sort_set() 516 memset(srt->pmat, 0, sizeof(*srt->pmat)*srt->ngrp*srt->nvset); in bcf_sr_sort_set() 572 if ( srt->msr < srt->nsr ) srt->msr = srt->nsr; in bcf_sr_sort_next() [all …]
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/dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/ |
H A D | bcf_sr_sort.c | 315 hts_expand(char*,srt->noff,srt->mcharp,srt->charp); in grp_create_key() 318 srt->charp[i] = srt->str.s + srt->off[i]; in grp_create_key() 370 srt->ngrp = srt->nvar = srt->nvset = 0; in bcf_sr_sort_set() 393 srt->off[srt->noff++] = srt->str.l; in bcf_sr_sort_set() 428 hts_expand0(var_t,srt->nvar,srt->mvar,srt->var); in bcf_sr_sort_set() 456 hts_expand0(grp_t, srt->ngrp, srt->mgrp, srt->grp); in bcf_sr_sort_set() 516 hts_expand(int, srt->ngrp*srt->nvset, srt->mpmat, srt->pmat); in bcf_sr_sort_set() 517 hts_expand(int, srt->nvset, srt->mcnt, srt->cnt); in bcf_sr_sort_set() 518 memset(srt->pmat, 0, sizeof(*srt->pmat)*srt->ngrp*srt->nvset); in bcf_sr_sort_set() 574 if ( srt->msr < srt->nsr ) srt->msr = srt->nsr; in bcf_sr_sort_next() [all …]
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/dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/ |
H A D | bcf_sr_sort.c | 304 hts_expand(char*,srt->noff,srt->mcharp,srt->charp); in grp_create_key() 307 srt->charp[i] = srt->str.s + srt->off[i]; in grp_create_key() 359 srt->ngrp = srt->nvar = srt->nvset = 0; in bcf_sr_sort_set() 382 srt->off[srt->noff++] = srt->str.l; in bcf_sr_sort_set() 417 hts_expand0(var_t,srt->nvar,srt->mvar,srt->var); in bcf_sr_sort_set() 445 hts_expand0(grp_t, srt->ngrp, srt->mgrp, srt->grp); in bcf_sr_sort_set() 513 hts_expand(int, srt->ngrp*srt->nvset, srt->mpmat, srt->pmat); in bcf_sr_sort_set() 514 hts_expand(int, srt->nvset, srt->mcnt, srt->cnt); in bcf_sr_sort_set() 515 memset(srt->pmat, 0, sizeof(*srt->pmat)*srt->ngrp*srt->nvset); in bcf_sr_sort_set() 573 if ( srt->msr < srt->nsr ) srt->msr = srt->nsr; in bcf_sr_sort_next() [all …]
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/dports/biology/stacks/stacks-2.4/htslib/ |
H A D | bcf_sr_sort.c | 313 hts_expand(char*,srt->noff,srt->mcharp,srt->charp); in grp_create_key() 316 srt->charp[i] = srt->str.s + srt->off[i]; in grp_create_key() 368 srt->ngrp = srt->nvar = srt->nvset = 0; in bcf_sr_sort_set() 391 srt->off[srt->noff++] = srt->str.l; in bcf_sr_sort_set() 426 hts_expand0(var_t,srt->nvar,srt->mvar,srt->var); in bcf_sr_sort_set() 454 hts_expand0(grp_t, srt->ngrp, srt->mgrp, srt->grp); in bcf_sr_sort_set() 514 hts_expand(int, srt->ngrp*srt->nvset, srt->mpmat, srt->pmat); in bcf_sr_sort_set() 515 hts_expand(int, srt->nvset, srt->mcnt, srt->cnt); in bcf_sr_sort_set() 516 memset(srt->pmat, 0, sizeof(*srt->pmat)*srt->ngrp*srt->nvset); in bcf_sr_sort_set() 572 if ( srt->msr < srt->nsr ) srt->msr = srt->nsr; in bcf_sr_sort_next() [all …]
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/dports/biology/kallisto/kallisto-0.46.1/ext/htslib/ |
H A D | bcf_sr_sort.c | 306 hts_expand(char*,srt->noff,srt->mcharp,srt->charp); in grp_create_key() 309 srt->charp[i] = srt->str.s + srt->off[i]; in grp_create_key() 347 srt->ngrp = srt->nvar = srt->nvset = 0; in bcf_sr_sort_set() 370 srt->off[srt->noff++] = srt->str.l; in bcf_sr_sort_set() 405 hts_expand0(var_t,srt->nvar,srt->mvar,srt->var); in bcf_sr_sort_set() 433 hts_expand0(grp_t, srt->ngrp, srt->mgrp, srt->grp); in bcf_sr_sort_set() 491 hts_expand(int, srt->ngrp*srt->nvset, srt->mpmat, srt->pmat); in bcf_sr_sort_set() 492 hts_expand(int, srt->nvset, srt->mcnt, srt->cnt); in bcf_sr_sort_set() 493 memset(srt->pmat, 0, sizeof(*srt->pmat)*srt->ngrp*srt->nvset); in bcf_sr_sort_set() 561 if ( srt->msr < srt->nsr ) srt->msr = srt->nsr; in bcf_sr_sort_next() [all …]
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/dports/biology/py-libsedml/libSEDML-2.0.26/src/sedml/ |
H A D | SedRepeatedTask.cpp | 1908 return (srt != NULL) ? srt->setResetModel(resetModel) : in SedRepeatedTask_setResetModel() 1966 return (srt != NULL) ? srt->getListOfRanges() : NULL; in SedRepeatedTask_getListOfRanges() 1977 return (srt != NULL) ? srt->getRange(n) : NULL; in SedRepeatedTask_getRange() 2034 return (srt != NULL) ? srt->createVectorRange() : NULL; in SedRepeatedTask_createVectorRange() 2058 return (srt != NULL) ? srt->createDataRange() : NULL; in SedRepeatedTask_createDataRange() 2070 return (srt != NULL) ? srt->removeRange(n) : NULL; in SedRepeatedTask_removeRange() 2105 return (srt != NULL) ? srt->getTaskChange(n) : NULL; in SedRepeatedTask_getTaskChange() 2166 return (srt != NULL) ? srt->createTaskChange() : NULL; in SedRepeatedTask_createTaskChange() 2201 return (srt != NULL) ? srt->getSubTask(n) : NULL; in SedRepeatedTask_getSubTask() 2247 return (srt != NULL) ? srt->createSubTask() : NULL; in SedRepeatedTask_createSubTask() [all …]
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H A D | SedRepeatedTask.h | 1513 SedRepeatedTask_clone(const SedRepeatedTask_t* srt); 1525 SedRepeatedTask_free(SedRepeatedTask_t* srt); 1697 SedRepeatedTask_unsetRangeId(SedRepeatedTask_t * srt); 1714 SedRepeatedTask_unsetResetModel(SedRepeatedTask_t * srt); 1731 SedRepeatedTask_unsetConcatenate(SedRepeatedTask_t* srt); 1756 SedRepeatedTask_getListOfRanges(SedRepeatedTask_t* srt); 1834 SedRepeatedTask_getNumRanges(SedRepeatedTask_t* srt); 1906 SedRepeatedTask_createDataRange(SedRepeatedTask_t* srt); 2058 SedRepeatedTask_addTaskChange(SedRepeatedTask_t* srt, 2216 SedRepeatedTask_getNumSubTasks(SedRepeatedTask_t* srt); [all …]
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/dports/biology/libsedml/libSEDML-2.0.26/src/sedml/ |
H A D | SedRepeatedTask.cpp | 1908 return (srt != NULL) ? srt->setResetModel(resetModel) : in SedRepeatedTask_setResetModel() 1966 return (srt != NULL) ? srt->getListOfRanges() : NULL; in SedRepeatedTask_getListOfRanges() 1977 return (srt != NULL) ? srt->getRange(n) : NULL; in SedRepeatedTask_getRange() 2034 return (srt != NULL) ? srt->createVectorRange() : NULL; in SedRepeatedTask_createVectorRange() 2058 return (srt != NULL) ? srt->createDataRange() : NULL; in SedRepeatedTask_createDataRange() 2070 return (srt != NULL) ? srt->removeRange(n) : NULL; in SedRepeatedTask_removeRange() 2105 return (srt != NULL) ? srt->getTaskChange(n) : NULL; in SedRepeatedTask_getTaskChange() 2166 return (srt != NULL) ? srt->createTaskChange() : NULL; in SedRepeatedTask_createTaskChange() 2201 return (srt != NULL) ? srt->getSubTask(n) : NULL; in SedRepeatedTask_getSubTask() 2247 return (srt != NULL) ? srt->createSubTask() : NULL; in SedRepeatedTask_createSubTask() [all …]
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H A D | SedRepeatedTask.h | 1513 SedRepeatedTask_clone(const SedRepeatedTask_t* srt); 1525 SedRepeatedTask_free(SedRepeatedTask_t* srt); 1697 SedRepeatedTask_unsetRangeId(SedRepeatedTask_t * srt); 1714 SedRepeatedTask_unsetResetModel(SedRepeatedTask_t * srt); 1731 SedRepeatedTask_unsetConcatenate(SedRepeatedTask_t* srt); 1756 SedRepeatedTask_getListOfRanges(SedRepeatedTask_t* srt); 1834 SedRepeatedTask_getNumRanges(SedRepeatedTask_t* srt); 1906 SedRepeatedTask_createDataRange(SedRepeatedTask_t* srt); 2058 SedRepeatedTask_addTaskChange(SedRepeatedTask_t* srt, 2216 SedRepeatedTask_getNumSubTasks(SedRepeatedTask_t* srt); [all …]
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/dports/multimedia/vlc/vlc-3.0.16/contrib/src/srt/ |
H A D | rules.mak | 1 # srt 7 PKGS += srt 10 ifeq ($(call need_pkg,"srt >= 1.2.2"),) 11 PKGS_FOUND += srt 20 $(TARBALLS)/srt-$(SRT_VERSION).tar.gz: 21 $(call download_pkg,$(SRT_URL),srt) 23 .sum-srt: srt-$(SRT_VERSION).tar.gz 25 srt: srt-$(SRT_VERSION).tar.gz .sum-srt target 30 $(APPLY) $(SRC)/srt/fix-partial-availability.patch 32 mv srt-$(SRT_VERSION) $@ && touch $@ [all …]
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/dports/www/srt/srt-1.4.4/srtcore/ |
H A D | sync_posix.cpp | 36 namespace srt namespace 162 srt::sync::Duration<srt::sync::steady_clock> srt::sync::TimePoint<srt::sync::steady_clock>::time_si… in time_since_epoch() 164 return srt::sync::Duration<srt::sync::steady_clock>(m_timestamp); in time_since_epoch() 167 srt::sync::TimePoint<srt::sync::steady_clock> srt::sync::steady_clock::now() in now() 189 srt::sync::steady_clock::duration srt::sync::microseconds_from(int64_t t_us) in microseconds_from() 199 srt::sync::steady_clock::duration srt::sync::seconds_from(int64_t t_s) in seconds_from() 276 srt::sync::Mutex* srt::sync::UniqueLock::mutex() in mutex() 287 namespace srt namespace 383 srt::sync::CThread& srt::sync::CThread::operator=(CThread&& other) in operator =() 385 srt::sync::CThread& srt::sync::CThread::operator=(CThread& other) in operator =() [all …]
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H A D | window.h | 148 m_tsLastArrTime(srt::sync::steady_clock::now()), in CPktTimeWindow() 154 srt::sync::setupMutex(m_lockPktWindow, "PktWindow"); in CPktTimeWindow() 175 srt::sync::ScopedLock cg(m_lockPktWindow); in getPktRcvSpeed() 193 srt::sync::ScopedLock cg(m_lockProbeWindow); in getBandwidth() 216 srt::sync::ScopedLock cg(m_lockPktWindow); 218 m_tsCurrArrTime = srt::sync::steady_clock::now(); 234 void probeArrival(const srt::CPacket& pkt, bool unordered) in probeArrival() 266 m_tsProbeTime = srt::sync::steady_clock::now(); in probe1Arrival() 272 void probe2Arrival(const srt::CPacket& pkt) in probe2Arrival() 288 const srt::sync::steady_clock::time_point now = srt::sync::steady_clock::now(); in probe2Arrival() [all …]
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H A D | sync_cxx11.cpp | 42 int srt::sync::clockSubsecondPrecision() in clockSubsecondPrecision() 44 …const int64_t ticks_per_sec = (srt::sync::steady_clock::period::den / srt::sync::steady_clock::per… in clockSubsecondPrecision() 55 srt::sync::Condition::Condition() {} in Condition() 57 srt::sync::Condition::~Condition() {} in ~Condition() 59 void srt::sync::Condition::init() {} in init() 61 void srt::sync::Condition::destroy() {} in destroy() 63 void srt::sync::Condition::wait(UniqueLock& lock) in wait() 79 void srt::sync::Condition::notify_one() in notify_one() 84 void srt::sync::Condition::notify_all() in notify_all() 99 void srt::sync::SetThreadLocalError(const CUDTException& e) in SetThreadLocalError() [all …]
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H A D | packet.cpp | 177 srt::CPacket::CPacket(): in CPacket() 198 char* srt::CPacket::getData() in getData() 217 void srt::CPacket::deallocate() in deallocate() 224 char* srt::CPacket::release() in release() 238 srt::CPacket::~CPacket() in ~CPacket() 247 size_t srt::CPacket::getLength() const in getLength() 368 void srt::CPacket::toNL() in toNL() 386 void srt::CPacket::toHL() in toHL() 485 srt::CPacket* srt::CPacket::clone() const in clone() 496 namespace srt { namespace [all …]
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H A D | sync.cpp | 34 namespace srt namespace 114 srt::sync::CEvent::CEvent() in CEvent() 121 srt::sync::CEvent::~CEvent() in ~CEvent() 134 void srt::sync::CEvent::notify_one() in notify_one() 155 void srt::sync::CEvent::lock_wait() in lock_wait() 166 namespace srt { namespace 169 srt::sync::CEvent g_Sync; 180 srt::sync::CTimer::CTimer() in CTimer() 185 srt::sync::CTimer::~CTimer() in ~CTimer() 261 void srt::sync::CTimer::tick() in tick() [all …]
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/dports/astro/gpsbabel/gpsbabel-gpsbabel_1_7_0/testo.d/ |
H A D | subrip.test | 1 rm -f ${TMPDIR}/subrip.srt 2 gpsbabel -i gpx -f ${REFERENCE}/track/gpx_subsecond-sample.gpx -o subrip -F ${TMPDIR}/subrip.srt 3 compare ${REFERENCE}/track/gpx_subsecond-sample~subrip.srt ${TMPDIR}/subrip.srt 4 …ck/gpx_subsecond-sample.gpx -o subrip,gps_date=20110702,gps_time=174725.200 -F ${TMPDIR}/subrip.srt 5 compare ${REFERENCE}/track/gpx_subsecond-sample~subrip.srt ${TMPDIR}/subrip.srt 6 …ample.gpx -o subrip,video_time=000000,gps_date=20110702,gps_time=174725.200 -F ${TMPDIR}/subrip.srt 7 compare ${REFERENCE}/track/gpx_subsecond-sample~subrip.srt ${TMPDIR}/subrip.srt 8 …e.gpx -o subrip,video_time=000000.200,gps_date=20110702,gps_time=174725.400 -F ${TMPDIR}/subrip.srt 9 compare ${REFERENCE}/track/gpx_subsecond-sample~subrip.srt ${TMPDIR}/subrip.srt 10 …ubsecond-sample.gpx -o subrip,gps_date=20110702,gps_time=174725.400 -F ${TMPDIR}/subrip-shifted.srt [all …]
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/dports/news/slrn/slrn-1.0.3/src/ |
H A D | score.c | 287 if (match_srt(h, srt->search.srt, newsgroup, 0)) in match_srt() 307 if (match_srt(h, srt->search.srt, newsgroup, 1)) in match_srt() 394 srt = srt->next; in match_srt() 401 if ((ival < srt->search.ival) == (srt->not_flag == 0)) in match_srt() 409 srt = srt->next; in match_srt() 413 if ((ival != srt->search.ival) == (srt->not_flag == 0)) in match_srt() 422 srt = srt->next; in match_srt() 506 if (srt->search.srt == NULL) return -1; in compile_psrt() 552 srt = srt->next; in compile_psrt() 606 free_srt (srt->search.srt); in free_srt_internal() [all …]
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/dports/net/wireshark/wireshark-3.6.1/epan/ |
H A D | srt_table.c | 32 if (!srt) { in get_srt_proto_id() 35 return srt->proto_id; in get_srt_proto_id() 40 return srt->tap_listen_str; in get_srt_tap_listener_name() 45 return srt->max_tables; in get_srt_max_tables() 50 return srt->srt_func; in get_srt_packet_func() 55 srt->param_data = data; in set_srt_table_param_data() 60 return srt->param_data; in get_srt_table_param_data() 96 g_free(srt->param_data); in free_srt_table() 97 srt->param_data = NULL; in free_srt_table() 148 pos = srt->param_cb(srt, opt_arg + len, err); in srt_table_get_filter() [all …]
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/dports/net/wireshark-lite/wireshark-3.6.1/epan/ |
H A D | srt_table.c | 32 if (!srt) { in get_srt_proto_id() 35 return srt->proto_id; in get_srt_proto_id() 40 return srt->tap_listen_str; in get_srt_tap_listener_name() 45 return srt->max_tables; in get_srt_max_tables() 50 return srt->srt_func; in get_srt_packet_func() 55 srt->param_data = data; in set_srt_table_param_data() 60 return srt->param_data; in get_srt_table_param_data() 96 g_free(srt->param_data); in free_srt_table() 97 srt->param_data = NULL; in free_srt_table() 148 pos = srt->param_cb(srt, opt_arg + len, err); in srt_table_get_filter() [all …]
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/dports/net/tshark-lite/wireshark-3.6.1/epan/ |
H A D | srt_table.c | 32 if (!srt) { in get_srt_proto_id() 35 return srt->proto_id; in get_srt_proto_id() 40 return srt->tap_listen_str; in get_srt_tap_listener_name() 45 return srt->max_tables; in get_srt_max_tables() 50 return srt->srt_func; in get_srt_packet_func() 55 srt->param_data = data; in set_srt_table_param_data() 60 return srt->param_data; in get_srt_table_param_data() 96 g_free(srt->param_data); in free_srt_table() 97 srt->param_data = NULL; in free_srt_table() 148 pos = srt->param_cb(srt, opt_arg + len, err); in srt_table_get_filter() [all …]
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/dports/net/tshark/wireshark-3.6.1/epan/ |
H A D | srt_table.c | 32 if (!srt) { in get_srt_proto_id() 35 return srt->proto_id; in get_srt_proto_id() 40 return srt->tap_listen_str; in get_srt_tap_listener_name() 45 return srt->max_tables; in get_srt_max_tables() 50 return srt->srt_func; in get_srt_packet_func() 55 srt->param_data = data; in set_srt_table_param_data() 60 return srt->param_data; in get_srt_table_param_data() 96 g_free(srt->param_data); in free_srt_table() 97 srt->param_data = NULL; in free_srt_table() 148 pos = srt->param_cb(srt, opt_arg + len, err); in srt_table_get_filter() [all …]
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/dports/multimedia/obs-studio/obs-studio-27.1.3/deps/libcaption/caption/ |
H A D | srt.h | 54 void srt_free(srt_t* srt); 59 static inline vtt_block_t* srt_next(vtt_block_t* srt) { return srt->next; } in srt_next() argument 69 …_from_caption_frame(caption_frame_t* frame, srt_t* srt) { return vtt_cue_from_caption_frame(frame,… in srt_cue_from_caption_frame() argument 74 static inline void srt_cue_free_head(srt_t* srt) { vtt_cue_free_head(srt); }; in srt_cue_free_head() argument 79 …atic inline srt_cue_t* srt_cue_new(srt_t* srt, const utf8_char_t* data, size_t size) { return vtt_… in srt_cue_new() argument 86 void srt_dump(srt_t* srt); 90 void vtt_dump(srt_t* srt);
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/dports/japanese/slrn/slrn-0.9.6.2/src/ |
H A D | score.c | 198 while (srt != NULL) in slrn_score_header() 263 if (srt->not_flag) in slrn_score_header() 279 if (srt->do_osearch) in slrn_score_header() 322 srt = srt->next; in slrn_score_header() 347 srt = srt->next; in slrn_score_header() 398 srt = &st->regexp_list; in chain_group_regexp() 440 if (NULL == (srt = srt->next)) in chain_group_regexp() 456 srt = srt->next; /* first not malloced */ in free_group_chain() 457 while (srt != NULL) in free_group_chain() 460 SLFREE (srt); in free_group_chain() [all …]
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