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/dports/biology/py-pysam/pysam-0.18.0/htslib/
H A Dbcf_sr_sort.c306 hts_expand(char*,srt->noff,srt->mcharp,srt->charp); in grp_create_key()
309 srt->charp[i] = srt->str.s + srt->off[i]; in grp_create_key()
361 srt->ngrp = srt->nvar = srt->nvset = 0; in bcf_sr_sort_set()
384 srt->off[srt->noff++] = srt->str.l; in bcf_sr_sort_set()
439 hts_expand0(var_t,srt->nvar,srt->mvar,srt->var); in bcf_sr_sort_set()
467 hts_expand0(grp_t, srt->ngrp, srt->mgrp, srt->grp); in bcf_sr_sort_set()
535 hts_expand(int, srt->ngrp*srt->nvset, srt->mpmat, srt->pmat); in bcf_sr_sort_set()
536 hts_expand(int, srt->nvset, srt->mcnt, srt->cnt); in bcf_sr_sort_set()
537 memset(srt->pmat, 0, sizeof(*srt->pmat)*srt->ngrp*srt->nvset); in bcf_sr_sort_set()
595 if ( srt->msr < srt->nsr ) srt->msr = srt->nsr; in bcf_sr_sort_next()
[all …]
/dports/biology/htslib/htslib-1.14/
H A Dbcf_sr_sort.c306 hts_expand(char*,srt->noff,srt->mcharp,srt->charp); in grp_create_key()
309 srt->charp[i] = srt->str.s + srt->off[i]; in grp_create_key()
361 srt->ngrp = srt->nvar = srt->nvset = 0; in bcf_sr_sort_set()
384 srt->off[srt->noff++] = srt->str.l; in bcf_sr_sort_set()
439 hts_expand0(var_t,srt->nvar,srt->mvar,srt->var); in bcf_sr_sort_set()
467 hts_expand0(grp_t, srt->ngrp, srt->mgrp, srt->grp); in bcf_sr_sort_set()
535 hts_expand(int, srt->ngrp*srt->nvset, srt->mpmat, srt->pmat); in bcf_sr_sort_set()
536 hts_expand(int, srt->nvset, srt->mcnt, srt->cnt); in bcf_sr_sort_set()
537 memset(srt->pmat, 0, sizeof(*srt->pmat)*srt->ngrp*srt->nvset); in bcf_sr_sort_set()
595 if ( srt->msr < srt->nsr ) srt->msr = srt->nsr; in bcf_sr_sort_next()
[all …]
/dports/biology/vt/vt-0.57721/lib/htslib/
H A Dbcf_sr_sort.c313 hts_expand(char*,srt->noff,srt->mcharp,srt->charp); in grp_create_key()
316 srt->charp[i] = srt->str.s + srt->off[i]; in grp_create_key()
368 srt->ngrp = srt->nvar = srt->nvset = 0; in bcf_sr_sort_set()
391 srt->off[srt->noff++] = srt->str.l; in bcf_sr_sort_set()
426 hts_expand0(var_t,srt->nvar,srt->mvar,srt->var); in bcf_sr_sort_set()
454 hts_expand0(grp_t, srt->ngrp, srt->mgrp, srt->grp); in bcf_sr_sort_set()
514 hts_expand(int, srt->ngrp*srt->nvset, srt->mpmat, srt->pmat); in bcf_sr_sort_set()
515 hts_expand(int, srt->nvset, srt->mcnt, srt->cnt); in bcf_sr_sort_set()
516 memset(srt->pmat, 0, sizeof(*srt->pmat)*srt->ngrp*srt->nvset); in bcf_sr_sort_set()
572 if ( srt->msr < srt->nsr ) srt->msr = srt->nsr; in bcf_sr_sort_next()
[all …]
/dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/
H A Dbcf_sr_sort.c315 hts_expand(char*,srt->noff,srt->mcharp,srt->charp); in grp_create_key()
318 srt->charp[i] = srt->str.s + srt->off[i]; in grp_create_key()
370 srt->ngrp = srt->nvar = srt->nvset = 0; in bcf_sr_sort_set()
393 srt->off[srt->noff++] = srt->str.l; in bcf_sr_sort_set()
428 hts_expand0(var_t,srt->nvar,srt->mvar,srt->var); in bcf_sr_sort_set()
456 hts_expand0(grp_t, srt->ngrp, srt->mgrp, srt->grp); in bcf_sr_sort_set()
516 hts_expand(int, srt->ngrp*srt->nvset, srt->mpmat, srt->pmat); in bcf_sr_sort_set()
517 hts_expand(int, srt->nvset, srt->mcnt, srt->cnt); in bcf_sr_sort_set()
518 memset(srt->pmat, 0, sizeof(*srt->pmat)*srt->ngrp*srt->nvset); in bcf_sr_sort_set()
574 if ( srt->msr < srt->nsr ) srt->msr = srt->nsr; in bcf_sr_sort_next()
[all …]
/dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/
H A Dbcf_sr_sort.c304 hts_expand(char*,srt->noff,srt->mcharp,srt->charp); in grp_create_key()
307 srt->charp[i] = srt->str.s + srt->off[i]; in grp_create_key()
359 srt->ngrp = srt->nvar = srt->nvset = 0; in bcf_sr_sort_set()
382 srt->off[srt->noff++] = srt->str.l; in bcf_sr_sort_set()
417 hts_expand0(var_t,srt->nvar,srt->mvar,srt->var); in bcf_sr_sort_set()
445 hts_expand0(grp_t, srt->ngrp, srt->mgrp, srt->grp); in bcf_sr_sort_set()
513 hts_expand(int, srt->ngrp*srt->nvset, srt->mpmat, srt->pmat); in bcf_sr_sort_set()
514 hts_expand(int, srt->nvset, srt->mcnt, srt->cnt); in bcf_sr_sort_set()
515 memset(srt->pmat, 0, sizeof(*srt->pmat)*srt->ngrp*srt->nvset); in bcf_sr_sort_set()
573 if ( srt->msr < srt->nsr ) srt->msr = srt->nsr; in bcf_sr_sort_next()
[all …]
/dports/biology/stacks/stacks-2.4/htslib/
H A Dbcf_sr_sort.c313 hts_expand(char*,srt->noff,srt->mcharp,srt->charp); in grp_create_key()
316 srt->charp[i] = srt->str.s + srt->off[i]; in grp_create_key()
368 srt->ngrp = srt->nvar = srt->nvset = 0; in bcf_sr_sort_set()
391 srt->off[srt->noff++] = srt->str.l; in bcf_sr_sort_set()
426 hts_expand0(var_t,srt->nvar,srt->mvar,srt->var); in bcf_sr_sort_set()
454 hts_expand0(grp_t, srt->ngrp, srt->mgrp, srt->grp); in bcf_sr_sort_set()
514 hts_expand(int, srt->ngrp*srt->nvset, srt->mpmat, srt->pmat); in bcf_sr_sort_set()
515 hts_expand(int, srt->nvset, srt->mcnt, srt->cnt); in bcf_sr_sort_set()
516 memset(srt->pmat, 0, sizeof(*srt->pmat)*srt->ngrp*srt->nvset); in bcf_sr_sort_set()
572 if ( srt->msr < srt->nsr ) srt->msr = srt->nsr; in bcf_sr_sort_next()
[all …]
/dports/biology/kallisto/kallisto-0.46.1/ext/htslib/
H A Dbcf_sr_sort.c306 hts_expand(char*,srt->noff,srt->mcharp,srt->charp); in grp_create_key()
309 srt->charp[i] = srt->str.s + srt->off[i]; in grp_create_key()
347 srt->ngrp = srt->nvar = srt->nvset = 0; in bcf_sr_sort_set()
370 srt->off[srt->noff++] = srt->str.l; in bcf_sr_sort_set()
405 hts_expand0(var_t,srt->nvar,srt->mvar,srt->var); in bcf_sr_sort_set()
433 hts_expand0(grp_t, srt->ngrp, srt->mgrp, srt->grp); in bcf_sr_sort_set()
491 hts_expand(int, srt->ngrp*srt->nvset, srt->mpmat, srt->pmat); in bcf_sr_sort_set()
492 hts_expand(int, srt->nvset, srt->mcnt, srt->cnt); in bcf_sr_sort_set()
493 memset(srt->pmat, 0, sizeof(*srt->pmat)*srt->ngrp*srt->nvset); in bcf_sr_sort_set()
561 if ( srt->msr < srt->nsr ) srt->msr = srt->nsr; in bcf_sr_sort_next()
[all …]
/dports/biology/py-libsedml/libSEDML-2.0.26/src/sedml/
H A DSedRepeatedTask.cpp1908 return (srt != NULL) ? srt->setResetModel(resetModel) : in SedRepeatedTask_setResetModel()
1966 return (srt != NULL) ? srt->getListOfRanges() : NULL; in SedRepeatedTask_getListOfRanges()
1977 return (srt != NULL) ? srt->getRange(n) : NULL; in SedRepeatedTask_getRange()
2034 return (srt != NULL) ? srt->createVectorRange() : NULL; in SedRepeatedTask_createVectorRange()
2058 return (srt != NULL) ? srt->createDataRange() : NULL; in SedRepeatedTask_createDataRange()
2070 return (srt != NULL) ? srt->removeRange(n) : NULL; in SedRepeatedTask_removeRange()
2105 return (srt != NULL) ? srt->getTaskChange(n) : NULL; in SedRepeatedTask_getTaskChange()
2166 return (srt != NULL) ? srt->createTaskChange() : NULL; in SedRepeatedTask_createTaskChange()
2201 return (srt != NULL) ? srt->getSubTask(n) : NULL; in SedRepeatedTask_getSubTask()
2247 return (srt != NULL) ? srt->createSubTask() : NULL; in SedRepeatedTask_createSubTask()
[all …]
H A DSedRepeatedTask.h1513 SedRepeatedTask_clone(const SedRepeatedTask_t* srt);
1525 SedRepeatedTask_free(SedRepeatedTask_t* srt);
1697 SedRepeatedTask_unsetRangeId(SedRepeatedTask_t * srt);
1714 SedRepeatedTask_unsetResetModel(SedRepeatedTask_t * srt);
1731 SedRepeatedTask_unsetConcatenate(SedRepeatedTask_t* srt);
1756 SedRepeatedTask_getListOfRanges(SedRepeatedTask_t* srt);
1834 SedRepeatedTask_getNumRanges(SedRepeatedTask_t* srt);
1906 SedRepeatedTask_createDataRange(SedRepeatedTask_t* srt);
2058 SedRepeatedTask_addTaskChange(SedRepeatedTask_t* srt,
2216 SedRepeatedTask_getNumSubTasks(SedRepeatedTask_t* srt);
[all …]
/dports/biology/libsedml/libSEDML-2.0.26/src/sedml/
H A DSedRepeatedTask.cpp1908 return (srt != NULL) ? srt->setResetModel(resetModel) : in SedRepeatedTask_setResetModel()
1966 return (srt != NULL) ? srt->getListOfRanges() : NULL; in SedRepeatedTask_getListOfRanges()
1977 return (srt != NULL) ? srt->getRange(n) : NULL; in SedRepeatedTask_getRange()
2034 return (srt != NULL) ? srt->createVectorRange() : NULL; in SedRepeatedTask_createVectorRange()
2058 return (srt != NULL) ? srt->createDataRange() : NULL; in SedRepeatedTask_createDataRange()
2070 return (srt != NULL) ? srt->removeRange(n) : NULL; in SedRepeatedTask_removeRange()
2105 return (srt != NULL) ? srt->getTaskChange(n) : NULL; in SedRepeatedTask_getTaskChange()
2166 return (srt != NULL) ? srt->createTaskChange() : NULL; in SedRepeatedTask_createTaskChange()
2201 return (srt != NULL) ? srt->getSubTask(n) : NULL; in SedRepeatedTask_getSubTask()
2247 return (srt != NULL) ? srt->createSubTask() : NULL; in SedRepeatedTask_createSubTask()
[all …]
H A DSedRepeatedTask.h1513 SedRepeatedTask_clone(const SedRepeatedTask_t* srt);
1525 SedRepeatedTask_free(SedRepeatedTask_t* srt);
1697 SedRepeatedTask_unsetRangeId(SedRepeatedTask_t * srt);
1714 SedRepeatedTask_unsetResetModel(SedRepeatedTask_t * srt);
1731 SedRepeatedTask_unsetConcatenate(SedRepeatedTask_t* srt);
1756 SedRepeatedTask_getListOfRanges(SedRepeatedTask_t* srt);
1834 SedRepeatedTask_getNumRanges(SedRepeatedTask_t* srt);
1906 SedRepeatedTask_createDataRange(SedRepeatedTask_t* srt);
2058 SedRepeatedTask_addTaskChange(SedRepeatedTask_t* srt,
2216 SedRepeatedTask_getNumSubTasks(SedRepeatedTask_t* srt);
[all …]
/dports/multimedia/vlc/vlc-3.0.16/contrib/src/srt/
H A Drules.mak1 # srt
7 PKGS += srt
10 ifeq ($(call need_pkg,"srt >= 1.2.2"),)
11 PKGS_FOUND += srt
20 $(TARBALLS)/srt-$(SRT_VERSION).tar.gz:
21 $(call download_pkg,$(SRT_URL),srt)
23 .sum-srt: srt-$(SRT_VERSION).tar.gz
25 srt: srt-$(SRT_VERSION).tar.gz .sum-srt target
30 $(APPLY) $(SRC)/srt/fix-partial-availability.patch
32 mv srt-$(SRT_VERSION) $@ && touch $@
[all …]
/dports/www/srt/srt-1.4.4/srtcore/
H A Dsync_posix.cpp36 namespace srt namespace
162 srt::sync::Duration<srt::sync::steady_clock> srt::sync::TimePoint<srt::sync::steady_clock>::time_si… in time_since_epoch()
164 return srt::sync::Duration<srt::sync::steady_clock>(m_timestamp); in time_since_epoch()
167 srt::sync::TimePoint<srt::sync::steady_clock> srt::sync::steady_clock::now() in now()
189 srt::sync::steady_clock::duration srt::sync::microseconds_from(int64_t t_us) in microseconds_from()
199 srt::sync::steady_clock::duration srt::sync::seconds_from(int64_t t_s) in seconds_from()
276 srt::sync::Mutex* srt::sync::UniqueLock::mutex() in mutex()
287 namespace srt namespace
383 srt::sync::CThread& srt::sync::CThread::operator=(CThread&& other) in operator =()
385 srt::sync::CThread& srt::sync::CThread::operator=(CThread& other) in operator =()
[all …]
H A Dwindow.h148 m_tsLastArrTime(srt::sync::steady_clock::now()), in CPktTimeWindow()
154 srt::sync::setupMutex(m_lockPktWindow, "PktWindow"); in CPktTimeWindow()
175 srt::sync::ScopedLock cg(m_lockPktWindow); in getPktRcvSpeed()
193 srt::sync::ScopedLock cg(m_lockProbeWindow); in getBandwidth()
216 srt::sync::ScopedLock cg(m_lockPktWindow);
218 m_tsCurrArrTime = srt::sync::steady_clock::now();
234 void probeArrival(const srt::CPacket& pkt, bool unordered) in probeArrival()
266 m_tsProbeTime = srt::sync::steady_clock::now(); in probe1Arrival()
272 void probe2Arrival(const srt::CPacket& pkt) in probe2Arrival()
288 const srt::sync::steady_clock::time_point now = srt::sync::steady_clock::now(); in probe2Arrival()
[all …]
H A Dsync_cxx11.cpp42 int srt::sync::clockSubsecondPrecision() in clockSubsecondPrecision()
44 …const int64_t ticks_per_sec = (srt::sync::steady_clock::period::den / srt::sync::steady_clock::per… in clockSubsecondPrecision()
55 srt::sync::Condition::Condition() {} in Condition()
57 srt::sync::Condition::~Condition() {} in ~Condition()
59 void srt::sync::Condition::init() {} in init()
61 void srt::sync::Condition::destroy() {} in destroy()
63 void srt::sync::Condition::wait(UniqueLock& lock) in wait()
79 void srt::sync::Condition::notify_one() in notify_one()
84 void srt::sync::Condition::notify_all() in notify_all()
99 void srt::sync::SetThreadLocalError(const CUDTException& e) in SetThreadLocalError()
[all …]
H A Dpacket.cpp177 srt::CPacket::CPacket(): in CPacket()
198 char* srt::CPacket::getData() in getData()
217 void srt::CPacket::deallocate() in deallocate()
224 char* srt::CPacket::release() in release()
238 srt::CPacket::~CPacket() in ~CPacket()
247 size_t srt::CPacket::getLength() const in getLength()
368 void srt::CPacket::toNL() in toNL()
386 void srt::CPacket::toHL() in toHL()
485 srt::CPacket* srt::CPacket::clone() const in clone()
496 namespace srt { namespace
[all …]
H A Dsync.cpp34 namespace srt namespace
114 srt::sync::CEvent::CEvent() in CEvent()
121 srt::sync::CEvent::~CEvent() in ~CEvent()
134 void srt::sync::CEvent::notify_one() in notify_one()
155 void srt::sync::CEvent::lock_wait() in lock_wait()
166 namespace srt { namespace
169 srt::sync::CEvent g_Sync;
180 srt::sync::CTimer::CTimer() in CTimer()
185 srt::sync::CTimer::~CTimer() in ~CTimer()
261 void srt::sync::CTimer::tick() in tick()
[all …]
/dports/astro/gpsbabel/gpsbabel-gpsbabel_1_7_0/testo.d/
H A Dsubrip.test1 rm -f ${TMPDIR}/subrip.srt
2 gpsbabel -i gpx -f ${REFERENCE}/track/gpx_subsecond-sample.gpx -o subrip -F ${TMPDIR}/subrip.srt
3 compare ${REFERENCE}/track/gpx_subsecond-sample~subrip.srt ${TMPDIR}/subrip.srt
4 …ck/gpx_subsecond-sample.gpx -o subrip,gps_date=20110702,gps_time=174725.200 -F ${TMPDIR}/subrip.srt
5 compare ${REFERENCE}/track/gpx_subsecond-sample~subrip.srt ${TMPDIR}/subrip.srt
6 …ample.gpx -o subrip,video_time=000000,gps_date=20110702,gps_time=174725.200 -F ${TMPDIR}/subrip.srt
7 compare ${REFERENCE}/track/gpx_subsecond-sample~subrip.srt ${TMPDIR}/subrip.srt
8 …e.gpx -o subrip,video_time=000000.200,gps_date=20110702,gps_time=174725.400 -F ${TMPDIR}/subrip.srt
9 compare ${REFERENCE}/track/gpx_subsecond-sample~subrip.srt ${TMPDIR}/subrip.srt
10 …ubsecond-sample.gpx -o subrip,gps_date=20110702,gps_time=174725.400 -F ${TMPDIR}/subrip-shifted.srt
[all …]
/dports/news/slrn/slrn-1.0.3/src/
H A Dscore.c287 if (match_srt(h, srt->search.srt, newsgroup, 0)) in match_srt()
307 if (match_srt(h, srt->search.srt, newsgroup, 1)) in match_srt()
394 srt = srt->next; in match_srt()
401 if ((ival < srt->search.ival) == (srt->not_flag == 0)) in match_srt()
409 srt = srt->next; in match_srt()
413 if ((ival != srt->search.ival) == (srt->not_flag == 0)) in match_srt()
422 srt = srt->next; in match_srt()
506 if (srt->search.srt == NULL) return -1; in compile_psrt()
552 srt = srt->next; in compile_psrt()
606 free_srt (srt->search.srt); in free_srt_internal()
[all …]
/dports/net/wireshark/wireshark-3.6.1/epan/
H A Dsrt_table.c32 if (!srt) { in get_srt_proto_id()
35 return srt->proto_id; in get_srt_proto_id()
40 return srt->tap_listen_str; in get_srt_tap_listener_name()
45 return srt->max_tables; in get_srt_max_tables()
50 return srt->srt_func; in get_srt_packet_func()
55 srt->param_data = data; in set_srt_table_param_data()
60 return srt->param_data; in get_srt_table_param_data()
96 g_free(srt->param_data); in free_srt_table()
97 srt->param_data = NULL; in free_srt_table()
148 pos = srt->param_cb(srt, opt_arg + len, err); in srt_table_get_filter()
[all …]
/dports/net/wireshark-lite/wireshark-3.6.1/epan/
H A Dsrt_table.c32 if (!srt) { in get_srt_proto_id()
35 return srt->proto_id; in get_srt_proto_id()
40 return srt->tap_listen_str; in get_srt_tap_listener_name()
45 return srt->max_tables; in get_srt_max_tables()
50 return srt->srt_func; in get_srt_packet_func()
55 srt->param_data = data; in set_srt_table_param_data()
60 return srt->param_data; in get_srt_table_param_data()
96 g_free(srt->param_data); in free_srt_table()
97 srt->param_data = NULL; in free_srt_table()
148 pos = srt->param_cb(srt, opt_arg + len, err); in srt_table_get_filter()
[all …]
/dports/net/tshark-lite/wireshark-3.6.1/epan/
H A Dsrt_table.c32 if (!srt) { in get_srt_proto_id()
35 return srt->proto_id; in get_srt_proto_id()
40 return srt->tap_listen_str; in get_srt_tap_listener_name()
45 return srt->max_tables; in get_srt_max_tables()
50 return srt->srt_func; in get_srt_packet_func()
55 srt->param_data = data; in set_srt_table_param_data()
60 return srt->param_data; in get_srt_table_param_data()
96 g_free(srt->param_data); in free_srt_table()
97 srt->param_data = NULL; in free_srt_table()
148 pos = srt->param_cb(srt, opt_arg + len, err); in srt_table_get_filter()
[all …]
/dports/net/tshark/wireshark-3.6.1/epan/
H A Dsrt_table.c32 if (!srt) { in get_srt_proto_id()
35 return srt->proto_id; in get_srt_proto_id()
40 return srt->tap_listen_str; in get_srt_tap_listener_name()
45 return srt->max_tables; in get_srt_max_tables()
50 return srt->srt_func; in get_srt_packet_func()
55 srt->param_data = data; in set_srt_table_param_data()
60 return srt->param_data; in get_srt_table_param_data()
96 g_free(srt->param_data); in free_srt_table()
97 srt->param_data = NULL; in free_srt_table()
148 pos = srt->param_cb(srt, opt_arg + len, err); in srt_table_get_filter()
[all …]
/dports/multimedia/obs-studio/obs-studio-27.1.3/deps/libcaption/caption/
H A Dsrt.h54 void srt_free(srt_t* srt);
59 static inline vtt_block_t* srt_next(vtt_block_t* srt) { return srt->next; } in srt_next() argument
69 …_from_caption_frame(caption_frame_t* frame, srt_t* srt) { return vtt_cue_from_caption_frame(frame,… in srt_cue_from_caption_frame() argument
74 static inline void srt_cue_free_head(srt_t* srt) { vtt_cue_free_head(srt); }; in srt_cue_free_head() argument
79 …atic inline srt_cue_t* srt_cue_new(srt_t* srt, const utf8_char_t* data, size_t size) { return vtt_… in srt_cue_new() argument
86 void srt_dump(srt_t* srt);
90 void vtt_dump(srt_t* srt);
/dports/japanese/slrn/slrn-0.9.6.2/src/
H A Dscore.c198 while (srt != NULL) in slrn_score_header()
263 if (srt->not_flag) in slrn_score_header()
279 if (srt->do_osearch) in slrn_score_header()
322 srt = srt->next; in slrn_score_header()
347 srt = srt->next; in slrn_score_header()
398 srt = &st->regexp_list; in chain_group_regexp()
440 if (NULL == (srt = srt->next)) in chain_group_regexp()
456 srt = srt->next; /* first not malloced */ in free_group_chain()
457 while (srt != NULL) in free_group_chain()
460 SLFREE (srt); in free_group_chain()
[all …]

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