| /dports/biology/gmap/gmap-2020-09-12/src/ |
| H A D | result.c | 112 Stage3_T stage3; in Result_free() local
124 stage3 = (*old)->array[0]; in Result_free()
126 stage3,Stage3_pairarray(stage3))); in Result_free()
127 Stage3_free(&stage3); in Result_free()
131 stage3,Stage3_pairarray(stage3))); in Result_free()
132 Stage3_free(&stage3); in Result_free()
135 stage3 = (*old)->array[i]; in Result_free()
137 i,stage3,Stage3_pairarray(stage3))); in Result_free()
138 Stage3_free(&stage3); in Result_free()
146 stage3 = (*old)->array[i]; in Result_free()
[all …]
|
| H A D | gmap.c | 2135 stage3,Stage3_querystart(stage3),Stage3_queryend(stage3), in local_separate_paths()
2136 Stage3_chrnum(stage3),Stage3_genomicstart(stage3),Stage3_genomicend(stage3)); in local_separate_paths()
2140 stage3,Stage3_querystart(stage3),Stage3_queryend(stage3), in local_separate_paths()
2141 Stage3_chrnum(stage3),Stage3_genomicstart(stage3),Stage3_genomicend(stage3)); in local_separate_paths()
2199 stage3,Stage3_joinable_left_p(stage3),Stage3_joinable_right_p(stage3))); in local_separate_paths()
2238 printf("%p %p\n",stage3,Stage3_pairs(stage3)); in local_separate_paths()
2261 printf("%p %p\n",stage3,Stage3_pairs(stage3)); in distant_separate_paths()
2356 printf("%p %p\n",stage3,Stage3_pairs(stage3)); in distant_separate_paths()
3000 Stage3_chrnum(stage3),Stage3_genomicstart(stage3),Stage3_genomicend(stage3)); in check_for_local()
3007 Stage3_chrnum(stage3),Stage3_genomicstart(stage3),Stage3_genomicend(stage3)); in check_for_local()
[all …]
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| H A D | samprint.c | 2051 stage3 = stage3array1[pathnum-1]; in SAM_print_paired()
2063 stage3 = stage3array2[pathnum-1]; in SAM_print_paired()
2079 stage3 = stage3array1[pathnum-1]; in SAM_print_paired()
2109 stage3 = stage3array2[pathnum-1]; in SAM_print_paired()
2158 stage3 = stage3array1[0]; in SAM_print_paired()
2186 stage3 = stage3array1[pathnum-1]; in SAM_print_paired()
2224 stage3 = stage3array2[0]; in SAM_print_paired()
2363 stage3 = stage3array1[0]; in SAM_print_paired()
2417 stage3 = stage3array1[pathnum-1]; in SAM_print_paired()
2492 stage3 = stage3array2[0]; in SAM_print_paired()
[all …]
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| H A D | output.c | 158 Stage3end_T *stage3array, stage3; in filestring_fromresult_sam() local
203 stage3 = stage3array[0]; in filestring_fromresult_sam()
205 … if (Stage3end_hittype(stage3) == SAMECHR_SPLICE || Stage3end_hittype(stage3) == TRANSLOC_SPLICE) { in filestring_fromresult_sam()
264 stage3 = stage3array[pathnum-1]; in filestring_fromresult_sam()
266 if (Stage3end_hittype(stage3) == SAMECHR_SPLICE || Stage3end_hittype(stage3) == TRANSLOC_SPLICE) { in filestring_fromresult_sam()
320 stage3 = stage3array[pathnum-1]; in filestring_fromresult_sam()
322 if (Stage3end_hittype(stage3) == SAMECHR_SPLICE || Stage3end_hittype(stage3) == TRANSLOC_SPLICE) { in filestring_fromresult_sam()
399 Stage3end_T *stage3array, stage3; in filestring_fromresult_gsnap() local
443 stage3 = stage3array[0]; in filestring_fromresult_gsnap()
484 stage3 = stage3array[pathnum-1]; in filestring_fromresult_gsnap()
[all …]
|
| /dports/devel/llvm-devel/llvm-project-f05c95f10fc1d8171071735af8ad3a9e87633120/clang/cmake/caches/ |
| H A D | 3-stage.cmake | 7 stage3
8 stage3-clang
9 stage3-check-all
10 stage3-check-llvm
11 stage3-check-clang
12 stage3-test-suite CACHE STRING "")
|
| /dports/devel/llvm12/llvm-project-12.0.1.src/clang/cmake/caches/ |
| H A D | 3-stage.cmake | 7 stage3
8 stage3-clang
9 stage3-check-all
10 stage3-check-llvm
11 stage3-check-clang
12 stage3-test-suite CACHE STRING "")
|
| /dports/devel/llvm11/llvm-11.0.1.src/tools/clang/cmake/caches/ |
| H A D | 3-stage.cmake | 7 stage3
8 stage3-clang
9 stage3-check-all
10 stage3-check-llvm
11 stage3-check-clang
12 stage3-test-suite CACHE STRING "")
|
| /dports/devel/llvm-cheri/llvm-project-37c49ff00e3eadce5d8703fdc4497f28458c64a8/clang/cmake/caches/ |
| H A D | 3-stage.cmake | 7 stage3
8 stage3-clang
9 stage3-check-all
10 stage3-check-llvm
11 stage3-check-clang
12 stage3-test-suite CACHE STRING "")
|
| /dports/devel/llvm10/llvm-10.0.1.src/tools/clang/cmake/caches/ |
| H A D | 3-stage.cmake | 7 stage3
8 stage3-clang
9 stage3-check-all
10 stage3-check-llvm
11 stage3-check-clang
12 stage3-test-suite CACHE STRING "")
|
| /dports/devel/wasi-compiler-rt13/llvm-project-13.0.1.src/clang/cmake/caches/ |
| H A D | 3-stage.cmake | 7 stage3
8 stage3-clang
9 stage3-check-all
10 stage3-check-llvm
11 stage3-check-clang
12 stage3-test-suite CACHE STRING "")
|
| /dports/devel/wasi-libcxx/llvm-project-13.0.1.src/clang/cmake/caches/ |
| H A D | 3-stage.cmake | 7 stage3
8 stage3-clang
9 stage3-check-all
10 stage3-check-llvm
11 stage3-check-clang
12 stage3-test-suite CACHE STRING "")
|
| /dports/devel/llvm90/llvm-9.0.1.src/tools/clang/cmake/caches/ |
| H A D | 3-stage.cmake | 7 stage3
8 stage3-clang
9 stage3-check-all
10 stage3-check-llvm
11 stage3-check-clang
12 stage3-test-suite CACHE STRING "")
|
| /dports/www/chromium-legacy/chromium-88.0.4324.182/third_party/llvm/clang/cmake/caches/ |
| H A D | 3-stage.cmake | 7 stage3
8 stage3-clang
9 stage3-check-all
10 stage3-check-llvm
11 stage3-check-clang
12 stage3-test-suite CACHE STRING "")
|
| /dports/devel/tinygo/tinygo-0.14.1/llvm-project/clang/cmake/caches/ |
| H A D | 3-stage.cmake | 7 stage3
8 stage3-clang
9 stage3-check-all
10 stage3-check-llvm
11 stage3-check-clang
12 stage3-test-suite CACHE STRING "")
|
| /dports/lang/rust/rustc-1.58.1-src/src/llvm-project/clang/cmake/caches/ |
| H A D | 3-stage.cmake | 7 stage3
8 stage3-clang
9 stage3-check-all
10 stage3-check-llvm
11 stage3-check-clang
12 stage3-test-suite CACHE STRING "")
|
| /dports/devel/wasi-compiler-rt12/llvm-project-12.0.1.src/clang/cmake/caches/ |
| H A D | 3-stage.cmake | 7 stage3
8 stage3-clang
9 stage3-check-all
10 stage3-check-llvm
11 stage3-check-clang
12 stage3-test-suite CACHE STRING "")
|
| /dports/devel/llvm13/llvm-project-13.0.1.src/clang/cmake/caches/ |
| H A D | 3-stage.cmake | 7 stage3
8 stage3-clang
9 stage3-check-all
10 stage3-check-llvm
11 stage3-check-clang
12 stage3-test-suite CACHE STRING "")
|
| /dports/devel/llvm80/llvm-8.0.1.src/tools/clang/cmake/caches/ |
| H A D | 3-stage.cmake | 7 stage3
8 stage3-clang
9 stage3-check-all
10 stage3-check-llvm
11 stage3-check-clang
12 stage3-test-suite CACHE STRING "")
|
| /dports/devel/llvm70/llvm-7.0.1.src/tools/clang/cmake/caches/ |
| H A D | 3-stage.cmake | 7 stage3
8 stage3-clang
9 stage3-check-all
10 stage3-check-llvm
11 stage3-check-clang
12 stage3-test-suite CACHE STRING "")
|
| /dports/lang/clang-mesa/clang-13.0.1.src/cmake/caches/ |
| H A D | 3-stage.cmake | 7 stage3
8 stage3-clang
9 stage3-check-all
10 stage3-check-llvm
11 stage3-check-clang
12 stage3-test-suite CACHE STRING "")
|
| /dports/www/gitea/gitea-1.16.5/services/pull/ |
| H A D | patch.go | 118 …= nil && !file.stage1.SameAs(file.stage2)) || (file.stage3 != nil && !file.stage1.SameAs(file.stag…
125 …se file.stage1 == nil && file.stage2 != nil && (file.stage3 == nil || file.stage2.SameAs(file.stag…
133 …il && file.stage2 != nil && file.stage3 != nil && file.stage2.sha == file.stage3.sha && file.stage…
142 …return gitRepo.AddObjectToIndex(file.stage3.mode, git.MustIDFromString(file.stage3.sha), file.stag…
148 case file.stage2 != nil && file.stage3 != nil:
151 if file.stage2.mode == "120000" || file.stage3.mode == "120000" {
155 if file.stage2.mode == "160000" || file.stage3.mode == "160000" {
159 if file.stage2.mode != file.stage3.mode {
184 … to get head object:%s at path: %s for merging. Error: %w", file.stage3.sha, file.stage3.path, err)
209 } else if file.stage3 != nil {
[all …]
|
| /dports/security/pkcrack/pkcrack-1.2.2/src/ |
| H A D | Makefile | 12 SRCS = crc.c mktmptbl.c main.c stage1.c keystuff.c stage2.c stage3.c exfunc.c\
15 OBJS = crc.o mktmptbl.o main.o stage1.o keystuff.o stage2.o stage3.o exfunc.o\
23 findkey$(SUFF): findkey.o crc.o stage3.o keystuff.o
24 $(CC) -o findkey $(CFLAGS) findkey.o crc.o stage3.o keystuff.o mktmptbl.o
53 main.o: pkctypes.h crc.h mktmptbl.h pkcrack.h stage1.h stage2.h stage3.h
61 stage3.o: pkctypes.h stage3.h
62 stage3.o: pkcrack.h crc.h keystuff.h mktmptbl.h
68 findkey.o: pkcrack.h stage3.h crc.h mktmptbl.h
|
| H A D | Makefile.wat | 26 SRCS = crc.c mktmptbl.c main.c stage1.c keystuff.c stage2.c stage3.c exfunc.c\
29 OBJS = crc.obj mktmptbl.obj main.obj stage1.obj keystuff.obj stage2.obj stage3.obj exfunc.obj\
38 …ile main libfile crc.obj,mktmptbl.obj,stage1.obj,keystuff.obj,stage2.obj,stage3.obj,exfunc.obj,rea…
40 findkey.exe: findkey.obj crc.obj stage3.obj keystuff.obj
41 $(LINK) file findkey libfile crc.obj,stage3.obj,keystuff.obj,mktmptbl.obj
61 findkey.c: pkcrack.h stage3.h crc.h
65 main.c: crc.h mktmptbl.h pkcrack.h stage1.h stage2.h stage3.h headers.h
71 stage3.c: crc.h keystuff.h pkcrack.h
|
| H A D | Makefile.emx | 4 SRCS = crc.c mktmptbl.c main.c stage1.c keystuff.c stage2.c stage3.c exfunc.c\
7 OBJS = crc.o mktmptbl.o main.o stage1.o keystuff.o stage2.o stage3.o exfunc.o\
18 findkey.exe: findkey.o crc.o stage3.o keystuff.o
19 $(CC) -s -o findkey.exe $(CFLAGS) findkey.o crc.o stage3.o keystuff.o
37 findkey.c: pkcrack.h stage3.h crc.h
41 main.c: crc.h mktmptbl.h pkcrack.h stage1.h stage2.h stage3.h headers.h
47 stage3.c: crc.h keystuff.h pkcrack.h
|
| /dports/devel/taskctl/taskctl-1.4.2/pkg/scheduler/ |
| H A D | scheduler_test.go | 43 stage3 := &Stage{
54 graph, err := NewExecutionGraph(stage1, stage2, stage3, stage4)
71 if stage3.Status != StatusCanceled || stage4.Status != StatusCanceled {
87 stage3 := &Stage{
95 graph, err := NewExecutionGraph(stage1, stage2, stage3)
108 if stage3.Status == StatusCanceled {
112 if stage3.Duration() <= 0 {
|