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Searched refs:triecontents_max (Results 1 – 5 of 5) sorted by relevance

/dports/biology/gmap/gmap-2020-09-12/src/
H A Dsplicetrie_build.h64 Triecontent_T **triecontents_max, Trieoffset_T **trieoffsets_max,
H A Dsplicetrie.c64 static Triecontent_T *triecontents_max; variable
85 triecontents_max = triecontents_max_in; in Splicetrie_setup()
H A Ddynprog_end.c110 static Triecontent_T *triecontents_max; variable
127 triecontents_max = triecontents_max_in; in Dynprog_end_setup()
2872 best_pairs = Splicetrie_solve_end5(best_pairs,triecontents_max,trieoffsets_max,j, in Dynprog_end5_known()
3132 best_pairs = Splicetrie_solve_end3(best_pairs,triecontents_max,trieoffsets_max,j, in Dynprog_end3_known()
H A Dgmap.c500 static Triecontent_T *triecontents_max = NULL; variable
6924 …Splicetrie_build_via_splicesites(&triecontents_obs,&trieoffsets_obs,&triecontents_max,&trieoffsets… in main()
6954 triecontents_max = (Triecontent_T *) NULL; in main()
7019 trieoffsets_obs,triecontents_obs,trieoffsets_max,triecontents_max); in main()
7035 trieoffsets_obs,triecontents_obs,trieoffsets_max,triecontents_max, in main()
7214 FREE(triecontents_max); in main()
H A Dsplicetrie_build.c2396 Triecontent_T **triecontents_max, Trieoffset_T **trieoffsets_max, in Splicetrie_build_via_splicesites() argument
2434 …triecontents_max_ptr = *triecontents_max = (Triecontent_T *) MALLOC(trie_max_size * sizeof(Triecon… in Splicetrie_build_via_splicesites()
2830 *triecontents_max = Uintlist_to_array(&nprinted_max,triecontents_max_list); in Splicetrie_build_via_splicesites()