/dports/astro/cfitsio/cfitsio-3.49/ |
H A D | eval.y | 139 int Node5, int Node6, int Node7 ); 142 int Node5, int Node6, int Node7, int Size); 1375 int Node5, int Node6, int Node7 ) in New_Func() argument 1379 Node5, Node6, Node7, 0); in New_Func() 1384 int Node5, int Node6, int Node7, int Size ) in New_FuncSize() argument 1392 Node5<0 || Node6<0 || Node7<0 ) return(-1); in New_FuncSize() 1406 this->SubNodes[6] = Node7; in New_FuncSize()
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H A D | eval_y.c | 202 int Node5, int Node6, int Node7 ); 205 int Node5, int Node6, int Node7, int Size); 3748 int Node5, int Node6, int Node7 ) in New_Func() argument 3752 Node5, Node6, Node7, 0); in New_Func() 3757 int Node5, int Node6, int Node7, int Size ) in New_FuncSize() argument 3765 Node5<0 || Node6<0 || Node7<0 ) return(-1); in New_FuncSize() 3779 this->SubNodes[6] = Node7; in New_FuncSize()
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/dports/astro/oskar/OSKAR-2.8.0/extern/cfitsio/ |
H A D | eval_y.c | 208 int Node5, int Node6, int Node7 ); 211 int Node5, int Node6, int Node7, int Size); 3989 int Node5, int Node6, int Node7 ) in New_Func() argument 3993 Node5, Node6, Node7, 0); in New_Func() 3998 int Node5, int Node6, int Node7, int Size ) in New_FuncSize() argument 4006 Node5<0 || Node6<0 || Node7<0 ) return(-1); in New_FuncSize() 4020 this->SubNodes[6] = Node7; in New_FuncSize()
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/dports/astro/py-astropy/astropy-5.0/cextern/cfitsio/lib/ |
H A D | eval_y.c | 210 int Node5, int Node6, int Node7 ); 213 int Node5, int Node6, int Node7, int Size); 3718 int Node5, int Node6, int Node7 ) in New_Func() argument 3722 Node5, Node6, Node7, 0); in New_Func() 3727 int Node5, int Node6, int Node7, int Size ) in New_FuncSize() argument 3735 Node5<0 || Node6<0 || Node7<0 ) return(-1); in New_FuncSize() 3749 this->SubNodes[6] = Node7; in New_FuncSize()
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/dports/biology/hyphy/hyphy-2.5.33/tests/data/ |
H A D | lysin.nex | 63 Tree Tree_1=((fulgens,(((kamtschatkana,(rufescens,(sorenseni,walallensis)Node9)Node7)Node5,(siebold… 64 Tree Tree_13=((fulgens,(((kamtschatkana,(rufescens,(sorenseni,walallensis)Node9)Node7)Node5,(siebol… 101 Tree_13.Node7.synRate=0.2433775009386973; 120 Tree_1.Node7.synRate:=TS1*Tree_13.Node7.synRate;
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/dports/biology/hyphy/hyphy-2.5.33/tests/hbltests/REL/ |
H A D | ModelMixture.bf | 46 …TREE tree = ((FULGENS,(((KAMTSCHATKANA,(RUFESCENS,(SORENSENI,WALALLENSIS)Node9)Node7)Node5,(SIEBOL… 2804 Tree tree_1_0=((FULGENS,(((KAMTSCHATKANA,(RUFESCENS,(SORENSENI,WALALLENSIS)Node9)Node7)Node5,(SIEBO… 2807 Tree tree_1_1=((FULGENS,(((KAMTSCHATKANA,(RUFESCENS,(SORENSENI,WALALLENSIS)Node9)Node7)Node5,(SIEBO… 2810 Tree tree_1_2=((FULGENS,(((KAMTSCHATKANA,(RUFESCENS,(SORENSENI,WALALLENSIS)Node9)Node7)Node5,(SIEBO… 2813 Tree tree_1_3=((FULGENS,(((KAMTSCHATKANA,(RUFESCENS,(SORENSENI,WALALLENSIS)Node9)Node7)Node5,(SIEBO… 2816 Tree tree_1_4=((FULGENS,(((KAMTSCHATKANA,(RUFESCENS,(SORENSENI,WALALLENSIS)Node9)Node7)Node5,(SIEBO… 2850 tree_1_1.Node7.synRate:=tree_1_0.Node7.synRate; 2898 tree_1_0.Node7.synRate:=0.0153686/codonFactor; 2945 tree_1_2.Node7.synRate:=tree_1_0.Node7.synRate; 2970 tree_1_3.Node7.synRate:=tree_1_0.Node7.synRate; [all …]
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/dports/biology/hyphy/hyphy-2.5.33/tests/hbltests/RegressionTesting/ |
H A D | ClearConstraintsBug.bf | 640 Tree _fasta_tree=(D1_5,D1_10,D1_8,D1_9,D1_7,D1_0,(D1_1,D1_2,D1_3,D1_4)Node7,D1_6); 646 _fasta_tree.Node7.synRate=0.1871920897518702; 664 _fasta_tree.Node7.nonSynRate:=omega*_fasta_tree.Node7.synRate; 672 Tree _fasta_tree2=(D1_5,D1_10,D1_8,D1_9,D1_7,D1_0,(D1_1,D1_2,D1_3,D1_4)Node7,D1_6); 674 _fasta_tree.Node7.synRate=0.1871920897518702; 677 Tree _fasta_tree3=(D1_5,D1_10,D1_8,D1_9,D1_7,D1_0,D1_6,(D1_1,D1_2,D1_3,D1_4)Node7); 680 _fasta_tree.Node7.synRate=0.1871920897518702;
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H A D | update_listener.bf | 653 Tree prKYidTF.tree_1=(((((AF_231119,AF231115)Node4,((AF082576,AF231113)Node8,AF231114)Node7)Node3,(… 656 Tree prKYidTF.tree_2=(AF_231119,((AF082576,AF231113)Node3,((AF231115,AF231114)Node7,(((AF186242,AF1… 659 …19,((((AF231117,(AF231116,(AF231113,AF187824)Node12)Node10)Node8,AF231114)Node7,AF231115)Node6,(AF… 724 prKYidTF.tree_1.Node7.beta:=prKYidTF.tree_1.Node7.alpha*prKYidTF.model_MGREV.omega_1; 725 prKYidTF.tree_1.Node7.alpha:=SLAC.scaler_1*0.002038014883539881; 768 prKYidTF.tree_2.Node7.beta:=prKYidTF.tree_2.Node7.alpha*prKYidTF.model_MGREV.omega_1; 769 prKYidTF.tree_2.Node7.alpha:=SLAC.scaler_2*0.007286740495391193; 820 prKYidTF.tree_3.Node7.beta:=prKYidTF.tree_3.Node7.alpha*prKYidTF.model_MGREV.omega_1; 821 prKYidTF.tree_3.Node7.alpha:=SLAC.scaler_3*0.01499751321311812; 860 prKYidTF.tree_4.Node7.beta:=prKYidTF.tree_4.Node7.alpha*prKYidTF.model_MGREV.omega_1; [all …]
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/dports/biology/hyphy/hyphy-2.5.33/tests/hbltests/RegressionTesting/RELAX/ |
H A D | segfault.nex.alternative.fit | 3419 ….reference_model})Node8{RELAX.reference_model},151{RELAX.reference_model})Node7{RELAX.reference_mo… 3439 RELAX.tree.Node7.t=0; 3742 RELAX.tree.Node7.local_k:=1; 3743 RELAX.tree.Node7.local_k:<50;
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H A D | segfault.nex.partitioned_descriptive.fit | 3419 ….reference_model})Node8{RELAX.reference_model},151{RELAX.reference_model})Node7{RELAX.reference_mo… 3439 RELAX.tree.Node7.t=0; 3742 RELAX.tree.Node7.local_k:=1; 3743 RELAX.tree.Node7.local_k:<50;
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/dports/biology/hyphy/hyphy-2.5.33/tests/hbltests/Results/ |
H A D | HIVSweden.out_MODEL_-1.nex | 639 Tree givenTree=(U68496,U68497,((U68498,(U68499,U68500)Node7)Node5,(U68501,(U68502,(U68503,((((U6850… 646 givenTree.Node7.t=0.6770911492487591;
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H A D | HIVSweden.out_MODEL_0.nex | 655 Tree givenTree=(U68496,U68497,((U68498,(U68499,U68500)Node7)Node5,(U68501,(U68502,(U68503,((((U6850… 662 givenTree.Node7.t=1.136554744000134;
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H A D | HIVSweden.out_MODEL_1.nex | 661 Tree givenTree=(U68496,U68497,((U68498,(U68499,U68500)Node7)Node5,(U68501,(U68502,(U68503,((((U6850… 668 givenTree.Node7.t=0.750108304945318;
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/dports/biology/hyphy/hyphy-2.5.33/tests/hbltests/SimpleOptimizations/ |
H A D | IntermediateProtein.bf | 1056 IntermediateCodon_tree.Node7.t=0.1;
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H A D | LargeNuc.bf | 3134 …,05_132886_200401)Node62,(JA_5016_198701,EC36_199407)Node65)Node61)Node49)Node7,((((((N03_200301,B… 3179 …,05_132886_200401)Node62,(JA_5016_198701,EC36_199407)Node65)Node61)Node49)Node7,((((((N03_200301,B… 8040 givenTree.Node7.t=0.007246204365027325;
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/dports/biology/hyphy/hyphy-2.5.33/tests/hbltests/SpecializedOptimizations/ |
H A D | AminoAcidPartitions.bf | 664 Tree tdIyVulQ.tree_0=(((t5,t3)Node3,((t16,t7)Node7,t4)Node6)Node2,((((t11,t2)Node14,(t9,t18)Node17)… 670 Tree tdIyVulQ.tree_2=((((((((t22,t92)Node8,t106)Node7,(t33,((t47,t116)Node15,t7)Node14)Node12)Node6… 673 Tree tdIyVulQ.tree_3=((((t18,((t88,t34)Node7,(t10,t44)Node10)Node6)Node4,(((t13,t57)Node15,(t33,t94… 683 tdIyVulQ.tree_0.Node7.t:=protein_gtr.gtr_scaler_0*0.01130996178844901; 822 tdIyVulQ.tree_2.Node7.t:=0; 1064 tdIyVulQ.tree_3.Node7.t:=protein_gtr.gtr_scaler_3*0.1976989299497103;
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H A D | SingleSiteTemplate.bf | 249 …022_73)Node14)Node12)Node10,(AF414417_198,X76716_BRISTOL_186)Node17)Node9)Node7,U46500_CAMBERWELL_… 448 givenTree.Node7.t=0.01625293581514876;
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H A D | SiteLikelihood.bf | 817 …022_73)Node14)Node12)Node10,(AF414417_198,X76716_BRISTOL_186)Node17)Node9)Node7,U46500_CAMBERWELL_… 831 siteTree.Node7.synRate:=0.0364048;
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/dports/biology/hyphy/hyphy-2.5.33/tests/hbltests/UnitTests/HBLCommands/ |
H A D | Branchname.bf | 32 expectedAllBranchNames = {{"a", "b", "ab", "e", "Node1", "c", "d", "Node7"}};
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/dports/biology/hyphy/hyphy-2.5.33/tests/hbltests/UnitTests/HBLCommands/res/ |
H A D | test_likefunc2.nex | 1047 IntermediateCodon_tree.Node7.t=0;
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/dports/biology/hyphy/hyphy-2.5.33/tests/hbltests/data/ |
H A D | fluHA_codon.nex | 370 …_189)Node117)Node115,ENG64889)Node114,(SHA16_989,SHA1_289)Node121)Node113)Node7,(GUA39_689,GUA_389…
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/dports/biology/hyphy/hyphy-2.5.33/tests/hbltests/libv3/data/ |
H A D | mammals.tre | 1 (((((((((HUM:1e-10,PAN:1e-10)Node8:0.00405492,GOR:1e-10)Node7:0.00825442,PON:0.0124524)Node6:1e-10,…
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H A D | partitioned.nex.EtaqIXyn.likelihoodFunction.bf | 654 Tree EtaqIXyn.tree_1=(((((AF_231119,AF231115)Node4,((AF082576,AF231113)Node8,AF231114)Node7)Node3,(… 657 Tree EtaqIXyn.tree_2=(AF_231119,((AF082576,AF231113)Node3,((AF231115,AF231114)Node7,(((AF186242,AF1… 660 …19,((((AF231117,(AF231116,(AF231113,AF187824)Node12)Node10)Node8,AF231114)Node7,AF231115)Node6,(AF… 725 EtaqIXyn.tree_1.Node7.beta:=EtaqIXyn.tree_1.Node7.alpha*EtaqIXyn.model_MGREV.omega_1; 726 EtaqIXyn.tree_1.Node7.alpha:=SLAC.scaler_1*0.002039479305287778; 769 EtaqIXyn.tree_2.Node7.beta:=EtaqIXyn.tree_2.Node7.alpha*EtaqIXyn.model_MGREV.omega_1; 770 EtaqIXyn.tree_2.Node7.alpha:=SLAC.scaler_2*0.007286535707714873; 821 EtaqIXyn.tree_3.Node7.beta:=EtaqIXyn.tree_3.Node7.alpha*EtaqIXyn.model_MGREV.omega_1; 822 EtaqIXyn.tree_3.Node7.alpha:=SLAC.scaler_3*0.01499511935147618; 861 EtaqIXyn.tree_4.Node7.beta:=EtaqIXyn.tree_4.Node7.alpha*EtaqIXyn.model_MGREV.omega_1; [all …]
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H A D | partitioned.nex.SLAC.bf | 653 Tree zlpofubS.tree_1=(((((AF_231119,AF231115)Node4,((AF082576,AF231113)Node8,AF231114)Node7)Node3,(… 656 Tree zlpofubS.tree_2=(AF_231119,((AF082576,AF231113)Node3,((AF231115,AF231114)Node7,(((AF186242,AF1… 659 …19,((((AF231117,(AF231116,(AF231113,AF187824)Node12)Node10)Node8,AF231114)Node7,AF231115)Node6,(AF… 724 zlpofubS.tree_1.Node7.beta:=zlpofubS.tree_1.Node7.alpha*zlpofubS.model_MGREV.omega_1; 725 zlpofubS.tree_1.Node7.alpha:=SLAC.scaler_1*0.002038023737590773; 768 zlpofubS.tree_2.Node7.beta:=zlpofubS.tree_2.Node7.alpha*zlpofubS.model_MGREV.omega_1; 769 zlpofubS.tree_2.Node7.alpha:=SLAC.scaler_2*0.007283120371672515; 820 zlpofubS.tree_3.Node7.beta:=zlpofubS.tree_3.Node7.alpha*zlpofubS.model_MGREV.omega_1; 821 zlpofubS.tree_3.Node7.alpha:=SLAC.scaler_3*0.01499769303442465; 860 zlpofubS.tree_4.Node7.beta:=zlpofubS.tree_4.Node7.alpha*zlpofubS.model_MGREV.omega_1; [all …]
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/dports/databases/freetds-devel/freetds-dev.1.3.7/doc/reference/ |
H A D | a00081.dot | 18 Node1 -> Node7 [color="midnightblue",fontsize="10",style="solid",fontname="Helvetica"]; 20 Node7 -> Node3 [color="midnightblue",fontsize="10",style="solid",fontname="Helvetica"]; 21 Node7 -> Node6 [color="midnightblue",fontsize="10",style="solid",fontname="Helvetica"]; 22 Node7 -> Node4 [color="midnightblue",fontsize="10",style="solid",fontname="Helvetica"]; 23 Node7 -> Node8 [color="midnightblue",fontsize="10",style="solid",fontname="Helvetica"]; 25 Node7 -> Node9 [color="midnightblue",fontsize="10",style="solid",fontname="Helvetica"]; 27 Node7 -> Node10 [color="midnightblue",fontsize="10",style="solid",fontname="Helvetica"]; 29 Node7 -> Node11 [color="midnightblue",fontsize="10",style="solid",fontname="Helvetica"]; 33 Node7 -> Node14 [color="midnightblue",fontsize="10",style="solid",fontname="Helvetica"]; 35 Node7 -> Node15 [color="midnightblue",fontsize="10",style="solid",fontname="Helvetica"]; [all …]
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