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/dports/biology/ncbi-toolkit/ncbi/network/wwwblast/db/CDD/
H A Dtest_CDD_db.sn1 14_3_3.csq
2 35EXOc.csq
3 4.1m.csq
4 53EXOc.csq
5 A1pp.csq
7 AAA.csq
8 AAI.csq
11 ADF.csq
15 ANK.csq
16 ANX.csq
[all …]
/dports/converters/p5-LaTeXML/LaTeXML-0.8.6/lib/LaTeXML/Package/
H A Dcsquotes.sty.ltxml68 \ifnum\csq@qlevel>\csq@maxlvl
77 \let\csq@kernchar@i\csq@thequote@oopen
80 \let\csq@kernchar@i\csq@thequote@iopen
95 \let\csq@iqmark\csq@eqerror
103 \def\csq@qclose@i{\csq@qclose@ii{}}%
152 {\csq@bquote{\csq@lang{#1}}{\csq@endlang}{\ltxml@mkcitation}}}
157 {\csq@bquote{\csq@hyph{#1}}{\csq@endhyph}{\ltxml@mkcitation}}}
163 {\iftoggle{csq@block}{\csq@lang}{\csq@hyph}{#1}}
164 {\iftoggle{csq@block}{\csq@endlang}{\csq@endhyph}}
202 \csq@bqgroup#1\csq@tempa#9%
[all …]
/dports/x11-wm/bspwm/bspwm-0.9.10/src/
H A Drule.c126 pr->csq = csq; in make_pending_rule()
164 free(pr->csq); in remove_pending_rule()
227 csq->focus = false; in _apply_window_type()
298 snprintf(csq->name, sizeof(csq->name), "%s", reply.name); in _apply_name()
392 snprintf(csq->monitor_desc, sizeof(csq->monitor_desc), "%s", value); in parse_key_value()
394 snprintf(csq->desktop_desc, sizeof(csq->desktop_desc), "%s", value); in parse_key_value()
396 snprintf(csq->node_desc, sizeof(csq->node_desc), "%s", value); in parse_key_value()
422 free(csq->rect); in parse_key_value()
423 csq->rect = NULL; in parse_key_value()
427 csq->hidden = v; in parse_key_value()
[all …]
H A Drule.h42 void _apply_window_type(xcb_window_t win, rule_consequence_t *csq);
43 void _apply_window_state(xcb_window_t win, rule_consequence_t *csq);
44 void _apply_transient(xcb_window_t win, rule_consequence_t *csq);
45 void _apply_hints(xcb_window_t win, rule_consequence_t *csq);
46 void _apply_class(xcb_window_t win, rule_consequence_t *csq);
47 void _apply_name(xcb_window_t win, rule_consequence_t *csq);
48 void parse_keys_values(char *buf, rule_consequence_t *csq);
49 void apply_rules(xcb_window_t win, rule_consequence_t *csq);
50 bool schedule_rules(xcb_window_t win, rule_consequence_t *csq);
51 void parse_rule_consequence(int fd, rule_consequence_t *csq);
[all …]
/dports/biology/bcftools/bcftools-1.14/test/csq/ENST00000580206/
H A Dtest.cmd1 {bin}/bcftools csq -f ENST00000580206.fa -g ENST00000580206.gff compound.ins-snv.vcf | ../sort-csq…
3 {bin}/bcftools csq -f ENST00000580206.fa -g short.gff compound.ins-snv.vcf | ../sort-csq | {bin}/b…
5 {bin}/bcftools csq -f ENST00000580206.fa -g ENST00000580206.gff single.ins-snv.vcf | ../sort-csq |…
7 {bin}/bcftools csq -f ENST00000580206.fa -g short.gff single.ins-snv.vcf | ../sort-csq | {bin}/bcf…
9 {bin}/bcftools csq -f ENST00000580206.fa -g ENST00000580206.gff compound.del-snv.vcf | ../sort-csq…
11 {bin}/bcftools csq -f ENST00000580206.fa -g short.gff compound.del-snv.vcf | ../sort-csq | {bin}/b…
13 {bin}/bcftools csq -f ENST00000580206.fa -g short.gff single.del-snv.vcf | ../sort-csq | {bin}/bcf…
15 {bin}/bcftools csq -f ENST00000580206.fa -g ENST00000580206.gff compound.del-ins.vcf | ../sort-csq…
17 {bin}/bcftools csq -f ENST00000580206.fa -g short.gff compound.del-ins.vcf | ../sort-csq | {bin}/b…
19 {bin}/bcftools csq -f ENST00000580206.fa -g short.gff single.del-ins.vcf | ../sort-csq | {bin}/bcf…
/dports/biology/bio-mocha/bcftools-1.14/test/csq/ENST00000580206/
H A Dtest.cmd1 {bin}/bcftools csq -f ENST00000580206.fa -g ENST00000580206.gff compound.ins-snv.vcf | ../sort-csq…
3 {bin}/bcftools csq -f ENST00000580206.fa -g short.gff compound.ins-snv.vcf | ../sort-csq | {bin}/b…
5 {bin}/bcftools csq -f ENST00000580206.fa -g ENST00000580206.gff single.ins-snv.vcf | ../sort-csq |…
7 {bin}/bcftools csq -f ENST00000580206.fa -g short.gff single.ins-snv.vcf | ../sort-csq | {bin}/bcf…
9 {bin}/bcftools csq -f ENST00000580206.fa -g ENST00000580206.gff compound.del-snv.vcf | ../sort-csq…
11 {bin}/bcftools csq -f ENST00000580206.fa -g short.gff compound.del-snv.vcf | ../sort-csq | {bin}/b…
13 {bin}/bcftools csq -f ENST00000580206.fa -g short.gff single.del-snv.vcf | ../sort-csq | {bin}/bcf…
15 {bin}/bcftools csq -f ENST00000580206.fa -g ENST00000580206.gff compound.del-ins.vcf | ../sort-csq…
17 {bin}/bcftools csq -f ENST00000580206.fa -g short.gff compound.del-ins.vcf | ../sort-csq | {bin}/b…
19 {bin}/bcftools csq -f ENST00000580206.fa -g short.gff single.del-ins.vcf | ../sort-csq | {bin}/bcf…
/dports/multimedia/v4l_compat/linux-5.13-rc2/drivers/net/ethernet/hisilicon/hns3/hns3vf/
H A Dhclgevf_cmd.c42 struct hclgevf_cmq_ring *csq = &hw->cmq.csq; in hclgevf_cmd_csq_clean() local
51 csq->next_to_use, csq->next_to_clean); in hclgevf_cmd_csq_clean()
58 clean = (head - csq->next_to_clean + csq->desc_num) % csq->desc_num; in hclgevf_cmd_csq_clean()
59 csq->next_to_clean = head; in hclgevf_cmd_csq_clean()
191 desc_to_use = &hw->cmq.csq.desc[hw->cmq.csq.next_to_use]; in hclgevf_cmd_copy_desc()
193 (hw->cmq.csq.next_to_use)++; in hclgevf_cmd_copy_desc()
194 if (hw->cmq.csq.next_to_use == hw->cmq.csq.desc_num) in hclgevf_cmd_copy_desc()
195 hw->cmq.csq.next_to_use = 0; in hclgevf_cmd_copy_desc()
297 struct hclgevf_cmq_ring *csq = &hw->cmq.csq; in hclgevf_cmd_send() local
321 ntc = hw->cmq.csq.next_to_use; in hclgevf_cmd_send()
[all …]
/dports/multimedia/v4l-utils/linux-5.13-rc2/drivers/net/ethernet/hisilicon/hns3/hns3vf/
H A Dhclgevf_cmd.c42 struct hclgevf_cmq_ring *csq = &hw->cmq.csq; in hclgevf_cmd_csq_clean() local
51 csq->next_to_use, csq->next_to_clean); in hclgevf_cmd_csq_clean()
58 clean = (head - csq->next_to_clean + csq->desc_num) % csq->desc_num; in hclgevf_cmd_csq_clean()
59 csq->next_to_clean = head; in hclgevf_cmd_csq_clean()
191 desc_to_use = &hw->cmq.csq.desc[hw->cmq.csq.next_to_use]; in hclgevf_cmd_copy_desc()
193 (hw->cmq.csq.next_to_use)++; in hclgevf_cmd_copy_desc()
194 if (hw->cmq.csq.next_to_use == hw->cmq.csq.desc_num) in hclgevf_cmd_copy_desc()
195 hw->cmq.csq.next_to_use = 0; in hclgevf_cmd_copy_desc()
297 struct hclgevf_cmq_ring *csq = &hw->cmq.csq; in hclgevf_cmd_send() local
321 ntc = hw->cmq.csq.next_to_use; in hclgevf_cmd_send()
[all …]
/dports/multimedia/libv4l/linux-5.13-rc2/drivers/net/ethernet/hisilicon/hns3/hns3vf/
H A Dhclgevf_cmd.c42 struct hclgevf_cmq_ring *csq = &hw->cmq.csq; in hclgevf_cmd_csq_clean() local
51 csq->next_to_use, csq->next_to_clean); in hclgevf_cmd_csq_clean()
58 clean = (head - csq->next_to_clean + csq->desc_num) % csq->desc_num; in hclgevf_cmd_csq_clean()
59 csq->next_to_clean = head; in hclgevf_cmd_csq_clean()
191 desc_to_use = &hw->cmq.csq.desc[hw->cmq.csq.next_to_use]; in hclgevf_cmd_copy_desc()
193 (hw->cmq.csq.next_to_use)++; in hclgevf_cmd_copy_desc()
194 if (hw->cmq.csq.next_to_use == hw->cmq.csq.desc_num) in hclgevf_cmd_copy_desc()
195 hw->cmq.csq.next_to_use = 0; in hclgevf_cmd_copy_desc()
297 struct hclgevf_cmq_ring *csq = &hw->cmq.csq; in hclgevf_cmd_send() local
321 ntc = hw->cmq.csq.next_to_use; in hclgevf_cmd_send()
[all …]
/dports/multimedia/libv4l/linux-5.13-rc2/drivers/net/ethernet/hisilicon/hns3/hns3pf/
H A Dhclge_cmd.c138 struct hclge_cmq_ring *csq = &hw->cmq.csq; in hclge_cmd_csq_clean() local
147 csq->next_to_use, csq->next_to_clean); in hclge_cmd_csq_clean()
156 clean = (head - csq->next_to_clean + csq->desc_num) % csq->desc_num; in hclge_cmd_csq_clean()
157 csq->next_to_clean = head; in hclge_cmd_csq_clean()
204 desc_to_use = &hw->cmq.csq.desc[hw->cmq.csq.next_to_use]; in hclge_cmd_copy_desc()
206 (hw->cmq.csq.next_to_use)++; in hclge_cmd_copy_desc()
207 if (hw->cmq.csq.next_to_use >= hw->cmq.csq.desc_num) in hclge_cmd_copy_desc()
208 hw->cmq.csq.next_to_use = 0; in hclge_cmd_copy_desc()
312 struct hclge_cmq_ring *csq = &hw->cmq.csq; in hclge_cmd_send() local
316 spin_lock_bh(&hw->cmq.csq.lock); in hclge_cmd_send()
[all …]
/dports/multimedia/v4l_compat/linux-5.13-rc2/drivers/net/ethernet/hisilicon/hns3/hns3pf/
H A Dhclge_cmd.c138 struct hclge_cmq_ring *csq = &hw->cmq.csq; in hclge_cmd_csq_clean() local
147 csq->next_to_use, csq->next_to_clean); in hclge_cmd_csq_clean()
156 clean = (head - csq->next_to_clean + csq->desc_num) % csq->desc_num; in hclge_cmd_csq_clean()
157 csq->next_to_clean = head; in hclge_cmd_csq_clean()
204 desc_to_use = &hw->cmq.csq.desc[hw->cmq.csq.next_to_use]; in hclge_cmd_copy_desc()
206 (hw->cmq.csq.next_to_use)++; in hclge_cmd_copy_desc()
207 if (hw->cmq.csq.next_to_use >= hw->cmq.csq.desc_num) in hclge_cmd_copy_desc()
208 hw->cmq.csq.next_to_use = 0; in hclge_cmd_copy_desc()
312 struct hclge_cmq_ring *csq = &hw->cmq.csq; in hclge_cmd_send() local
316 spin_lock_bh(&hw->cmq.csq.lock); in hclge_cmd_send()
[all …]
/dports/multimedia/v4l-utils/linux-5.13-rc2/drivers/net/ethernet/hisilicon/hns3/hns3pf/
H A Dhclge_cmd.c138 struct hclge_cmq_ring *csq = &hw->cmq.csq; in hclge_cmd_csq_clean() local
147 csq->next_to_use, csq->next_to_clean); in hclge_cmd_csq_clean()
156 clean = (head - csq->next_to_clean + csq->desc_num) % csq->desc_num; in hclge_cmd_csq_clean()
157 csq->next_to_clean = head; in hclge_cmd_csq_clean()
204 desc_to_use = &hw->cmq.csq.desc[hw->cmq.csq.next_to_use]; in hclge_cmd_copy_desc()
206 (hw->cmq.csq.next_to_use)++; in hclge_cmd_copy_desc()
207 if (hw->cmq.csq.next_to_use >= hw->cmq.csq.desc_num) in hclge_cmd_copy_desc()
208 hw->cmq.csq.next_to_use = 0; in hclge_cmd_copy_desc()
312 struct hclge_cmq_ring *csq = &hw->cmq.csq; in hclge_cmd_send() local
316 spin_lock_bh(&hw->cmq.csq.lock); in hclge_cmd_send()
[all …]
/dports/biology/bio-mocha/bcftools-1.14/
H A Dcsq.c224 #define CSQ_PRN_STRAND(csq) ((csq)&CSQ_COMPOUND && !((csq)&(CSQ_SPLICE_ACCEPTOR|CSQ_SPLICE_DONO… argument
1553 uint32_t csq; member
1702 csq_t csq; in csq_stage_splice() local
2271 child->csq = splice.csq; in hap_init()
2329 child->csq = splice.csq; in hap_init()
2714 …if ( csq->type & CSQ_START_STOP && csq->type & CSQ_MISSENSE_VARIANT ) csq->type &= ~CSQ_MISSENSE_V… in kput_vcsq()
2716 if ( csq->type & CSQ_PRINTED_UPSTREAM && csq->ref ) in kput_vcsq()
2733 if ( csq->gene ) kputs(csq->gene , str); in kput_vcsq()
2741 if ( CSQ_PRN_STRAND(csq->type) || csq->vstr.l ) in kput_vcsq()
3640 csq.type.type = child->csq; in test_cds()
[all …]
/dports/biology/bcftools/bcftools-1.14/
H A Dcsq.c224 #define CSQ_PRN_STRAND(csq) ((csq)&CSQ_COMPOUND && !((csq)&(CSQ_SPLICE_ACCEPTOR|CSQ_SPLICE_DONO… argument
1553 uint32_t csq; member
1702 csq_t csq; in csq_stage_splice() local
2271 child->csq = splice.csq; in hap_init()
2329 child->csq = splice.csq; in hap_init()
2714 …if ( csq->type & CSQ_START_STOP && csq->type & CSQ_MISSENSE_VARIANT ) csq->type &= ~CSQ_MISSENSE_V… in kput_vcsq()
2716 if ( csq->type & CSQ_PRINTED_UPSTREAM && csq->ref ) in kput_vcsq()
2733 if ( csq->gene ) kputs(csq->gene , str); in kput_vcsq()
2741 if ( CSQ_PRN_STRAND(csq->type) || csq->vstr.l ) in kput_vcsq()
3640 csq.type.type = child->csq; in test_cds()
[all …]
/dports/biology/py-pysam/pysam-0.18.0/bcftools/
H A Dcsq.c224 #define CSQ_PRN_STRAND(csq) ((csq)&CSQ_COMPOUND && !((csq)&(CSQ_SPLICE_ACCEPTOR|CSQ_SPLICE_DONO… argument
1553 uint32_t csq; member
1702 csq_t csq; in csq_stage_splice() local
2271 child->csq = splice.csq; in hap_init()
2329 child->csq = splice.csq; in hap_init()
2714 …if ( csq->type & CSQ_START_STOP && csq->type & CSQ_MISSENSE_VARIANT ) csq->type &= ~CSQ_MISSENSE_V… in kput_vcsq()
2716 if ( csq->type & CSQ_PRINTED_UPSTREAM && csq->ref ) in kput_vcsq()
2733 if ( csq->gene ) kputs(csq->gene , str); in kput_vcsq()
2741 if ( CSQ_PRN_STRAND(csq->type) || csq->vstr.l ) in kput_vcsq()
3640 csq.type.type = child->csq; in test_cds()
[all …]
H A Dcsq.c.pysam.c226 #define CSQ_PRN_STRAND(csq) ((csq)&CSQ_COMPOUND && !((csq)&(CSQ_SPLICE_ACCEPTOR|CSQ_SPLICE_DONO… argument
1555 uint32_t csq; member
1704 csq_t csq; in csq_stage_splice() local
2273 child->csq = splice.csq; in hap_init()
2331 child->csq = splice.csq; in hap_init()
2716 …if ( csq->type & CSQ_START_STOP && csq->type & CSQ_MISSENSE_VARIANT ) csq->type &= ~CSQ_MISSENSE_V… in kput_vcsq()
2718 if ( csq->type & CSQ_PRINTED_UPSTREAM && csq->ref ) in kput_vcsq()
2735 if ( csq->gene ) kputs(csq->gene , str); in kput_vcsq()
2743 if ( CSQ_PRN_STRAND(csq->type) || csq->vstr.l ) in kput_vcsq()
3642 csq.type.type = child->csq; in test_cds()
[all …]
/dports/lang/kawa/kawa-3.1.1/gnu/kawa/io/
H A DQueueReader.java58 public QueueReader append (CharSequence csq) in append() argument
60 if (csq == null) in append()
61 csq = "null"; in append()
62 return append(csq, 0, csq.length()); in append()
67 if (csq == null) in append()
68 csq = "null"; in append()
73 if (csq instanceof String) in append()
74 ((String) csq).getChars(start, end, d, sz); in append()
75 else if (csq instanceof CharSeq) in append()
76 ((CharSeq) csq).getChars(start, end, d, sz); in append()
[all …]
/dports/biology/bio-mocha/bcftools-1.14/test/csq/
H A Dmake-csq-test268 my ($pos,$ref,$alt,$csq) = split(/\t/,$line);
269 my @csq = split(/,/,$csq);
270 chomp($csq[-1]);
271 for my $csq (@csq)
273 if ( $csq=~/Transcript\|$$opts{tscript}/ ) { push @out,$csq; }
276 $csq = join(',',@out);
299 my @csq = split(/,/,$csq);
300 chomp($csq[-1]);
301 for my $csq (@csq)
303 if ( !($csq=~/Transcript/) or $csq=~/Transcript\|$$opts{tscript}/ ) { push @out,$csq; }
[all …]
/dports/biology/bcftools/bcftools-1.14/test/csq/
H A Dmake-csq-test268 my ($pos,$ref,$alt,$csq) = split(/\t/,$line);
269 my @csq = split(/,/,$csq);
270 chomp($csq[-1]);
271 for my $csq (@csq)
273 if ( $csq=~/Transcript\|$$opts{tscript}/ ) { push @out,$csq; }
276 $csq = join(',',@out);
299 my @csq = split(/,/,$csq);
300 chomp($csq[-1]);
301 for my $csq (@csq)
303 if ( !($csq=~/Transcript/) or $csq=~/Transcript\|$$opts{tscript}/ ) { push @out,$csq; }
[all …]
/dports/biology/bio-mocha/bcftools-1.14/test/csq/ENST00000379416/
H A Dcompound.cmd1 {bin}/bcftools csq -B 3 -f ENST00000379416.fa -g ENST00000379416.gff compound.del-snp.vcf | .…
3 {bin}/bcftools csq -B 3 -f ENST00000379416.fa -g ENST00000379416.gff compound.ins-del.vcf | .…
5 {bin}/bcftools csq -B 3 -f ENST00000379416.fa -g ENST00000379416.gff compound.ins-ins.vcf | .…
7 {bin}/bcftools csq -B 3 -f ENST00000379416.fa -g ENST00000379416.gff compound.ins-snp.vcf | .…
9 {bin}/bcftools csq -B 3 -f ENST00000379416.fa -g ENST00000379416.gff single.vcf | .…
/dports/biology/bcftools/bcftools-1.14/test/csq/ENST00000379416/
H A Dcompound.cmd1 {bin}/bcftools csq -B 3 -f ENST00000379416.fa -g ENST00000379416.gff compound.del-snp.vcf | .…
3 {bin}/bcftools csq -B 3 -f ENST00000379416.fa -g ENST00000379416.gff compound.ins-del.vcf | .…
5 {bin}/bcftools csq -B 3 -f ENST00000379416.fa -g ENST00000379416.gff compound.ins-ins.vcf | .…
7 {bin}/bcftools csq -B 3 -f ENST00000379416.fa -g ENST00000379416.gff compound.ins-snp.vcf | .…
9 {bin}/bcftools csq -B 3 -f ENST00000379416.fa -g ENST00000379416.gff single.vcf | .…
/dports/www/grails/grails-1.3.6/src/java/org/codehaus/groovy/grails/web/util/
H A DBoundedCharsAsEncodedBytesCounter.java131 public Writer append(CharSequence csq, int start, int end) throws IOException { in append() argument
134 if (csq instanceof StringBuilder || csq instanceof StringBuffer) { in append()
143 if (csq instanceof StringBuilder) { in append()
144 ((StringBuilder) csq).getChars(start, end, cbuf, 0); in append()
147 ((StringBuffer) csq).getChars(start, end, cbuf, 0); in append()
152 write(csq.subSequence(start, end).toString()); in append()
158 public Writer append(CharSequence csq) throws IOException { in append() argument
161 if (csq == null) { in append()
165 append(csq, 0, csq.length()); in append()
/dports/java/openjdk11/jdk11u-jdk-11.0.13-8-1/src/java.base/share/classes/java/io/
H A DWriter.java99 public Writer append(CharSequence csq) throws IOException { in nullWriter() argument
105 public Writer append(CharSequence csq, int start, int end) throws IOException { in nullWriter() argument
107 if (csq != null) { in nullWriter()
108 Objects.checkFromToIndex(start, end, csq.length()); in nullWriter()
321 public Writer append(CharSequence csq) throws IOException { in append() argument
322 write(String.valueOf(csq)); in append()
364 public Writer append(CharSequence csq, int start, int end) throws IOException { in append() argument
365 if (csq == null) csq = "null"; in append()
366 return append(csq.subSequence(start, end)); in append()
/dports/java/openjdk13/jdk13u-jdk-13.0.10-1-1/src/java.base/share/classes/java/io/
H A DWriter.java99 public Writer append(CharSequence csq) throws IOException { in nullWriter() argument
105 public Writer append(CharSequence csq, int start, int end) throws IOException { in nullWriter() argument
107 if (csq != null) { in nullWriter()
108 Objects.checkFromToIndex(start, end, csq.length()); in nullWriter()
321 public Writer append(CharSequence csq) throws IOException { in append() argument
322 write(String.valueOf(csq)); in append()
364 public Writer append(CharSequence csq, int start, int end) throws IOException { in append() argument
365 if (csq == null) csq = "null"; in append()
366 return append(csq.subSequence(start, end)); in append()
/dports/java/openjdk16/jdk16u-jdk-16.0.2-7-1/src/java.base/share/classes/java/io/
H A DWriter.java99 public Writer append(CharSequence csq) throws IOException { in nullWriter() argument
105 public Writer append(CharSequence csq, int start, int end) throws IOException { in nullWriter() argument
107 if (csq != null) { in nullWriter()
108 Objects.checkFromToIndex(start, end, csq.length()); in nullWriter()
321 public Writer append(CharSequence csq) throws IOException { in append() argument
322 write(String.valueOf(csq)); in append()
364 public Writer append(CharSequence csq, int start, int end) throws IOException { in append() argument
365 if (csq == null) csq = "null"; in append()
366 return append(csq.subSequence(start, end)); in append()

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