/dports/biology/subread/subread-2.0.2-source/src/ |
H A D | sambam-file.c | 1609 int i, fldi = 0, start_pos = -1; in duplicate_TAB_record_field() local 1615 if(fldi == fno) start_pos = i+1; in duplicate_TAB_record_field() 1620 start_pos = rline[0]>0?0:-1; in duplicate_TAB_record_field() 1621 if(start_pos == 0) for(i=0;rline[i] && rline[i] != '\n' && rline[i] != '\t'; i++); in duplicate_TAB_record_field() 1632 if(start_pos<0 || end_pos <= start_pos) return NULL; in duplicate_TAB_record_field() 1633 char * ret = malloc(end_pos - start_pos +1); in duplicate_TAB_record_field() 1634 memcpy(ret, rline+start_pos, end_pos -start_pos); in duplicate_TAB_record_field() 1635 ret[end_pos -start_pos] = 0; in duplicate_TAB_record_field()
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H A D | core-junction.c | 1583 …r * rtext, int rlen, int start_coverage, int end_coverage, unsigned int start_pos, unsigned int en… 2058 …r * rtext, int rlen, int start_coverage, int end_coverage, unsigned int start_pos, unsigned int en… in find_donor_receptor() argument 2064 unsigned int search_in_chro_start = start_pos + indels_in_start + search_in_read_start; in find_donor_receptor() 2155 …unsigned int start_pos = start_vote->pos[ ii_array[start_element_i] ][ jj_array[start_element_i] … in find_path() local 2159 long long dist = start_pos; in find_path() 2168 if(start_pos < end_pos){ in find_path() 2170 …read_name, this_read_text, this_read_len, start_coverage, end_coverage, start_pos, end_pos, indels… in find_path()
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/dports/biology/p5-transdecoder/TransDecoder-TransDecoder-v5.4.0/util/ |
H A D | start_codon_refinement.pl | 225 my $start_pos = $lend; 228 $start_pos = length($transcript_seq) - $rend + 1; 233 my $start_index = $start_pos - 1; # zero based
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/dports/benchmarks/phoronix-test-suite/phoronix-test-suite-10.6.1/pts-core/objects/phodevi/components/ |
H A D | phodevi_system.php | 1107 $start_pos = strpos($os, '.'); 1109 $start_pos = strrpos(substr($os, 0, $start_pos), ' '); 1112 $os_version = substr($os, $start_pos + 1, $end_pos - $start_pos);
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/dports/audio/vgmplay/vgmplay-0.40.9_2/chips/ |
H A D | np_nes_fds.c | 294 UINT32 start_pos, end_pos, p; 297 start_pos = fds->phase[TMOD] >> 16; 305 for (p = start_pos; p < end_pos; ++p)
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/dports/mail/thunderbird/thunderbird-91.8.0/toolkit/components/protobuf/src/google/protobuf/stubs/ |
H A D | strutil.cc | 140 string::size_type start_pos = 0; in StringReplace() local 143 pos = s.find(oldsub, start_pos); in StringReplace() 147 res->append(s, start_pos, pos - start_pos); in StringReplace() 149 start_pos = pos + oldsub.size(); // start searching again after the "old" in StringReplace() 151 res->append(s, start_pos, s.length() - start_pos); in StringReplace()
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/dports/mail/thunderbird/thunderbird-91.8.0/third_party/rust/regalloc/src/linear_scan/ |
H A D | assign_registers.rs | 721 let (start_pos, reg_class) = { in allocate_blocked_reg() 746 start_pos in allocate_blocked_reg() 759 next_use(&state.intervals.get(int_id), start_pos, &state.reg_uses) in allocate_blocked_reg() 834 if first_use == start_pos { in allocate_blocked_reg() 872 split_and_spill(state, int_id, start_pos); in allocate_blocked_reg()
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/dports/mail/thunderbird/thunderbird-91.8.0/third_party/rust/fluent-syntax/src/parser/ |
H A D | comment.rs | 72 let start_pos = self.ptr; in get_comment_line() localVariable 78 Ok(self.source.slice(start_pos..self.ptr)) in get_comment_line()
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H A D | pattern.rs | 161 let start_pos = self.ptr; in get_text_slice() localVariable 170 start_pos, in get_text_slice() 179 start_pos, in get_text_slice() 187 start_pos, in get_text_slice() 203 start_pos, in get_text_slice()
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/dports/mail/thunderbird/thunderbird-91.8.0/third_party/rust/minidump_writer_linux/src/ |
H A D | minidump_writer.rs | 91 let start_pos = self.last_position_written_to_file as usize; in write_to_file() localVariable 92 self.destination.write_all(&buffer.get_ref()[start_pos..])?; in write_to_file()
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/dports/mail/thunderbird/thunderbird-91.8.0/toolkit/components/protobuf/src/google/protobuf/util/internal/ |
H A D | proto_writer.cc | 335 int start_pos = ow_->stream_->ByteCount(); in ProtoElement() local 340 SizeInfo info = {start_pos, -start_pos}; in ProtoElement()
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/dports/mail/thunderbird/thunderbird-91.8.0/third_party/libwebrtc/webrtc/modules/audio_coding/codecs/ilbc/ |
H A D | decode_residual.c | 46 size_t meml_gotten, diff, start_pos; in WebRtcIlbcfix_DecodeResidual() local 55 start_pos = (iLBC_encbits->startIdx-1)*SUBL; in WebRtcIlbcfix_DecodeResidual() 57 start_pos = (iLBC_encbits->startIdx-1)*SUBL + diff; in WebRtcIlbcfix_DecodeResidual() 64 &decresidual[start_pos], iLBCdec_inst->state_short_len in WebRtcIlbcfix_DecodeResidual() 72 WEBRTC_SPL_MEMCPY_W16(mem+CB_MEML-iLBCdec_inst->state_short_len, decresidual+start_pos, in WebRtcIlbcfix_DecodeResidual() 78 &decresidual[start_pos + iLBCdec_inst->state_short_len], in WebRtcIlbcfix_DecodeResidual() 90 decresidual+start_pos, meml_gotten); in WebRtcIlbcfix_DecodeResidual() 103 WebRtcSpl_MemCpyReversedOrder(&decresidual[start_pos-1], in WebRtcIlbcfix_DecodeResidual()
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H A D | defines.h | 166 int16_t start_pos; member
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H A D | encode.c | 53 size_t diff, start_pos; in WebRtcIlbcfix_EncodeImpl() local 92 start_pos = iLBCenc_inst->start_pos; in WebRtcIlbcfix_EncodeImpl() 174 start_pos = (iLBCbits_inst->startIdx-1)*SUBL; in WebRtcIlbcfix_EncodeImpl() 177 start_pos = (iLBCbits_inst->startIdx-1)*SUBL + diff; in WebRtcIlbcfix_EncodeImpl() 182 WebRtcIlbcfix_StateSearch(iLBCenc_inst, iLBCbits_inst, &residual[start_pos], in WebRtcIlbcfix_EncodeImpl() 188 &decresidual[start_pos], iLBCenc_inst->state_short_len in WebRtcIlbcfix_EncodeImpl() 199 decresidual+start_pos, iLBCenc_inst->state_short_len); in WebRtcIlbcfix_EncodeImpl() 204 &residual[start_pos+iLBCenc_inst->state_short_len], in WebRtcIlbcfix_EncodeImpl() 211 &decresidual[start_pos + iLBCenc_inst->state_short_len], in WebRtcIlbcfix_EncodeImpl() 243 WebRtcSpl_MemCpyReversedOrder(&decresidual[start_pos-1], reverseDecresidual, diff); in WebRtcIlbcfix_EncodeImpl() [all …]
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/dports/mail/thunderbird/thunderbird-91.8.0/third_party/libwebrtc/webrtc/modules/audio_coding/neteq/test/delay_tool/ |
H A D | parse_delay_file.m | 29 start_pos = ftell(fid); variable 38 fseek(fid, start_pos, 'bof');
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/dports/mail/thunderbird/thunderbird-91.8.0/third_party/libwebrtc/webrtc/rtc_base/ |
H A D | stringencode.cc | 606 size_t start_pos = remain_source.find(start_mark); in tokenize() local 607 if (std::string::npos == start_pos) break; in tokenize() 609 if (start_pos > 0) { in tokenize() 610 pre_mark = remain_source.substr(0, start_pos - 1); in tokenize() 613 ++start_pos; in tokenize() 614 size_t end_pos = remain_source.find(end_mark, start_pos); in tokenize() 620 fields->push_back(remain_source.substr(start_pos, end_pos - start_pos)); in tokenize()
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/dports/mail/thunderbird/thunderbird-91.8.0/third_party/libwebrtc/webrtc/system_wrappers/source/ |
H A D | aligned_malloc.cc | 28 uintptr_t GetRightAlign(uintptr_t start_pos, size_t alignment) { in GetRightAlign() argument 31 return (start_pos + alignment - 1) & ~(alignment - 1); in GetRightAlign() 49 uintptr_t start_pos = reinterpret_cast<uintptr_t>(pointer); in GetRightAlign() local 50 return reinterpret_cast<void*>(GetRightAlign(start_pos, alignment)); in GetRightAlign()
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/dports/mail/thunderbird/thunderbird-91.8.0/third_party/jpeg-xl/lib/jxl/jpeg/ |
H A D | enc_jpeg_data_reader.cc | 53 if (start_pos + marker_len != *pos) { \ 55 marker_len, (*pos - start_pos)); \ 88 const size_t start_pos = *pos; in ProcessSOF() local 163 const size_t start_pos = *pos; in ProcessSOS() local 256 const size_t start_pos = *pos; in ProcessDHT() local 264 while (*pos < start_pos + marker_len) { in ProcessDHT() 329 huff.is_last = (*pos == start_pos + marker_len); in ProcessDHT() 343 const size_t start_pos = *pos; in ProcessDQT() local 351 while (*pos < start_pos + marker_len && jpg->quant.size() < kMaxQuantTables) { in ProcessDQT() 368 table.is_last = (*pos == start_pos + marker_len); in ProcessDQT() [all …]
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/dports/mail/thunderbird/thunderbird-91.8.0/third_party/aom/tools/ |
H A D | cpplint.py | 1343 (start_pos, num_open) = FindStartOfExpressionInLine( 1345 if start_pos > -1: 1346 return (line, linenum, start_pos) 1352 (start_pos, num_open) = FindStartOfExpressionInLine( 1354 if start_pos > -1: 1355 return (line, linenum, start_pos) 3180 start_pos = -1 3193 start_pos = len(matched.group(1)) 3195 if not check_macro or start_pos < 0: 3201 clean_lines, linenum, start_pos) [all …]
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/dports/mail/thunderbird/thunderbird-91.8.0/third_party/python/ply/ |
H A D | CHANGES | 265 start_pos = p.lexpos(3) 273 start_pos, end_pos = p.lexspan(3)
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/dports/mail/thunderbird/thunderbird-91.8.0/third_party/aom/av1/encoder/ |
H A D | firstpass.c | 2305 const FIRSTPASS_STATS *const start_pos = twopass->stats_in; local 2640 reset_fpf_position(twopass, start_pos); 2704 reset_fpf_position(twopass, start_pos); 2709 start_pos, twopass->stats_in_end, rc->baseline_gf_interval); 2769 const FIRSTPASS_STATS *start_pos = twopass->stats_in; local 2813 reset_fpf_position(twopass, start_pos);
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/dports/mail/thunderbird/thunderbird-91.8.0/third_party/libwebrtc/webrtc/modules/rtp_rtcp/source/ |
H A D | rtp_format_vp9_unittest.cc | 154 size_t start_pos, in CheckPayload() argument 157 for (size_t i = start_pos; i < end_pos; ++i) { in CheckPayload()
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H A D | rtp_format_vp8.cc | 262 void RtpPacketizerVp8::QueuePacket(size_t start_pos, in QueuePacket() argument 267 packet_info.payload_start_pos = start_pos; in QueuePacket()
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H A D | rtp_format_vp8.h | 89 void QueuePacket(size_t start_pos,
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H A D | rtp_format_vp9.cc | 155 void QueuePacket(size_t start_pos, in QueuePacket() argument 161 packet_info.payload_start_pos = start_pos; in QueuePacket()
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