Searched defs:querylength_given (Results 1 – 2 of 2) sorted by relevance
/dports/biology/gmap/gmap-2020-09-12/src/ |
H A D | simplepair.c | 517 …ntronp, int *hardclip_start, int *hardclip_end, struct T *pairs, int npairs, int querylength_given, in compute_cigar_standard() 798 …ntronp, int *hardclip_start, int *hardclip_end, struct T *pairs, int npairs, int querylength_given, in compute_cigar_extended() 1123 …ntronp, int *hardclip_start, int *hardclip_end, struct T *pairs, int npairs, int querylength_given, in compute_cigar() 1732 int hardclip_low, int hardclip_high, int querylength_given, in Simplepair_overlap_print_sam()
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H A D | pair.c | 1246 int querylength_given, int skiplength, int trim_start, int trim_end, in Pair_print_pathsummary() 2568 int querylength_given, int skiplength, int matches, int mismatches, in print_gff3_mrna() 2881 … int querylength_given, int skiplength, int matches, int mismatches, int qindels, int tindels, in print_gff3_est_match() 2970 int querylength_given, int skiplength, int matches, int mismatches, in print_gff3_exons_forward() 3723 int translation_end, int querylength_given, int skiplength, int matches, int mismatches, in Pair_print_gff3() 5223 …ntronp, int *hardclip_start, int *hardclip_end, struct T *pairs, int npairs, int querylength_given, in compute_cigar_standard() 5504 …ntronp, int *hardclip_start, int *hardclip_end, struct T *pairs, int npairs, int querylength_given, in compute_cigar_extended() 5829 …ntronp, int *hardclip_start, int *hardclip_end, struct T *pairs, int npairs, int querylength_given, in Pair_compute_cigar() 6331 int hardclip_low, int hardclip_high, int querylength_given, in Pair_print_sam() 9188 Univcoord_T chroffset, Univ_IIT_T chromosome_iit, int querylength_given, in Pair_print_compressed()
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