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Searched defs:alnfile (Results 1 – 12 of 12) sorted by relevance

/dports/cad/meshlab/meshlab-Meshlab-2020.05/src/meshlabplugins/filter_plymc/
H A Dplymc_main.cpp22 string alnfile; variable
212 string alnfile; in main() local
/dports/devel/vcglib/vcglib-2020.09/apps/plymc/
H A Dplymc_main.cpp22 string alnfile; variable
208 string alnfile; in main() local
/dports/devel/vcglib/vcglib-2020.09/wrap/io_trimesh/
H A DalnParser.h120 static bool SaveALN(const char *alnfile, std::vector<std::string> &names) in SaveALN()
127 static bool SaveALN(const char *alnfile, std::vector<std::string> &names, std::vector<vcg::Matrix44… in SaveALN()
/dports/cad/meshlab/meshlab-Meshlab-2020.05/src/meshlab/
H A DalnParser.h120 static bool SaveALN(const char *alnfile, std::vector<std::string> &names) in SaveALN()
127 static bool SaveALN(const char *alnfile, std::vector<std::string> &names, std::vector<vcg::Matrix44… in SaveALN()
/dports/biology/infernal/infernal-1.1.3/easel/
H A Desl_msafile_clustal.c767 read_test_msas_digital(char *alnfile, char *stkfile) in read_test_msas_digital()
817 read_test_msas_text(char *alnfile, char *stkfile) in read_test_msas_text()
895 char alnfile[32] = "esltmpalnXXXXXX"; in main() local
/dports/biology/hmmer/hmmer-3.3/easel/
H A Desl_msafile_clustal.c767 read_test_msas_digital(char *alnfile, char *stkfile) in read_test_msas_digital()
817 read_test_msas_text(char *alnfile, char *stkfile) in read_test_msas_text()
895 char alnfile[32] = "esltmpalnXXXXXX"; in main() local
/dports/biology/clustal-omega/clustal-omega-1.2.4/src/hhalign/
H A Dhhhalfalignment-C.h420 HalfAlignment::Print(char* alnfile) in Print()
H A Dhhalignment-C.h2604 Alignment::WriteWithoutInsertsToFile(char* alnfile) in WriteWithoutInsertsToFile()
2626 void Alignment::WriteToFile(char* alnfile, const char format[]) in WriteToFile()
H A Dhhdecl-C.h94 char alnfile[NAMELEN]; // name of output alignment file in A3M format (for iterative search) variable
/dports/biology/hhsuite/hh-suite-3.3.0/src/
H A Dhhhalfalignment.cpp312 void HalfAlignment::Print(char* alnfile, const char append, char* commentname, in Print()
H A Dhhdecl.h156 char alnfile[NAMELEN]; // name of output alignment file in A3M format (for iterative search) variable
H A Dhhalignment.cpp3378 void Alignment::WriteWithoutInsertsToFile(const char* alnfile, in WriteWithoutInsertsToFile()
3418 void Alignment::WriteToFile(const char* alnfile, const char append, in WriteToFile()