Searched defs:bpdist (Results 1 – 5 of 5) sorted by relevance
| /dports/biology/viennarna/ViennaRNA-2.4.18/src/ViennaRNA/ |
| H A D | fold_compound.h | 323 …unsigned int *bpdist; /**< @brief Matrix containing base pair distance of reference st… member
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| H A D | 2Dpfold.h | 177 …unsigned int *bpdist; /**< @brief Matrix containing base pair distance of refere… member
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| H A D | 2Dfold.c | 385 … maxD1, maxD2, seq_length, dia, dib, dja, djb, *referenceBPs1, *referenceBPs2, *mm1, *mm2, *bpdist; in mfe_linear() local
3005 …, maxD2, seq_length, *referenceBPs1, *referenceBPs2, d1, d2, base_d1, base_d2, *mm1, *mm2, *bpdist; in mfe_circ() local
3889 int bpdist, in prepareBoundaries()
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| H A D | 2Dfold.h | 149 …unsigned int *bpdist; /**< @brief Matrix containing base pair distance of refere… member
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| H A D | 2Dpfold.c | 371 maxD2, *mm1, *mm2, *bpdist; in pf2D_linear() local
1178 … d, p, q, pq, k, l, kl, u, da, db, seq_length, maxD1, maxD2, base_d1, base_d2, *mm1, *mm2, *bpdist; in pf2D_circ() local
4174 int bpdist, in prepareBoundaries()
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