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Searched defs:dangles_arg (Results 1 – 19 of 19) sorted by relevance

/dports/biology/viennarna/ViennaRNA-2.4.18/src/bin/
H A DRNAdos_cmdl.h79 …int dangles_arg; /**< @brief How to treat \"dangling end\" energies for bases adjacent to helices … member
H A DRNAaliduplex_cmdl.h73 …int dangles_arg; /**< @brief How to treat \"dangling end\" energies for bases adjacent to helices … member
H A DRNAduplex_cmdl.h80 …int dangles_arg; /**< @brief How to treat \"dangling end\" energies for bases adjacent to helices … member
H A DRNApdist_cmdl.h77 int dangles_arg; /**< @brief set energy model for treatment of dangling bases member
H A DRNAinverse_cmdl.h98 …int dangles_arg; /**< @brief How to treat \"dangling end\" energies for bases adjacent to helices … member
H A DRNA2Dfold_cmdl.h136 …int dangles_arg; /**< @brief How to treat \"dangling end\" energies for bases adjacent to helices … member
H A DRNApaln_cmdl.h116 …int dangles_arg; /**< @brief How to treat \"dangling end\" energies for bases adjacent to helices … member
H A DRNAup_cmdl.h83 …int dangles_arg; /**< @brief Specify \"dangling end\" model for bases adjacent to helices in free … member
H A DRNAheat_cmdl.h155 …int dangles_arg; /**< @brief How to treat \"dangling end\" energies for bases adjacent to helices … member
H A DRNApvmin_cmdl.h98 …int dangles_arg; /**< @brief Specify \"dangling end\" model for bases adjacent to helices in free … member
H A DRNALfold_cmdl.h183 int dangles_arg; /**< @brief Change the dangling end model member
H A DRNAeval_cmdl.h129 …int dangles_arg; /**< @brief How to treat \"dangling end\" energies for bases adjacent to helices … member
H A DRNAplfold_cmdl.h102 …int dangles_arg; /**< @brief Specify \"dangling end\" model for bases adjacent to helices in free … member
H A DRNALalifold_cmdl.h210 …int dangles_arg; /**< @brief How to treat \"dangling end\" energies for bases adjacent to helices … member
H A DRNAsubopt_cmdl.h134 …int dangles_arg; /**< @brief Specify \"dangling end\" model for bases adjacent to helices in free … member
H A DRNAfold_cmdl.h264 …int dangles_arg; /**< @brief How to treat \"dangling end\" energies for bases adjacent to helices … member
H A DRNAcofold_cmdl.h265 …int dangles_arg; /**< @brief How to treat \"dangling end\" energies for bases adjacent to helices … member
H A DRNAalifold_cmdl.h301 …int dangles_arg; /**< @brief How to treat \"dangling end\" energies for bases adjacent to helices … member
/dports/biology/viennarna/ViennaRNA-2.4.18/src/RNAlocmin/
H A DRNAlocmin_cmdline.h104 …int dangles_arg; /**< @brief How to treat \"dangling end\" energies for bases adjacent to helices … member