| /dports/biology/checkm/CheckM-1.0.18/checkm/ |
| H A D | markerSets.py | 248 def getMarkerSets(self, outDir, binIds, markerFile, excludeMarkersFile=None): argument
299 def createHmmModels(self, outDir, binIds, markerFile): argument
326 def createHmmModelFile(self, binId, markerFile): argument
345 def __createLineageHmmModels(self, binIds, markerFile): argument
389 def __fetchModelInfo(self, binIdToModels, markerFile, queueIn, queueOut): argument
428 def markerFileType(self, markerFile): argument
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| H A D | markerGeneFinder.py | 44 …def find(self, binFiles, outDir, tableOut, hmmerOut, markerFile, bKeepAlignment, bNucORFs, bCalled… argument
97 …def __processBin(self, outDir, tableOut, hmmerOut, markerFile, bKeepAlignment, bNucORFs, bCalledGe… argument
|
| H A D | taxonParser.py | 79 def markerSet(self, rank, taxon, markerFile): argument
|
| H A D | treeParser.py | 466 def getBinMarkerSets(self, outDir, markerFile, argument
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| H A D | hmmerAligner.py | 127 markerFile, argument
|
| /dports/science/opensim-core/opensim-core-4.1/OpenSim/Simulation/ |
| H A D | MarkersReference.cpp | 39 MarkersReference::MarkersReference(const std::string& markerFile, in MarkersReference()
58 void MarkersReference::initializeFromMarkersFile(const std::string& markerFile, in initializeFromMarkersFile()
|
| /dports/science/opensim-core/opensim-core-4.1/Bindings/Java/Matlab/examples/ |
| H A D | setupAndRunIKBatchExample.m | 67 markerFile = trialsForIK(trial).name; variable
|
| /dports/astro/xplanet/xplanet-1.3.1/src/libannotate/ |
| H A D | addMarkers.cpp | 426 string markerFile(*ii); in addMarkers() local
472 string markerFile(*ii); in addMarkers() local
|
| /dports/science/opensim-core/opensim-core-4.1/OpenSim/Simulation/OpenSense/ |
| H A D | IMUInverseKinematicsTool.cpp | 238 IMUInverseKinematicsTool::loadMarkersFile(const std::string& markerFile) in loadMarkersFile()
|
| /dports/devel/hadoop2/hadoop-2.7.2-src/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/datanode/ |
| H A D | BlockPoolSliceStorage.java | 798 File markerFile = new File(bpRoot, ROLLING_UPGRADE_MARKER_FILE); in setRollingUpgradeMarkers() local
820 File markerFile = new File(bpRoot, ROLLING_UPGRADE_MARKER_FILE); in clearRollingUpgradeMarkers() local
|
| /dports/science/opensim-core/opensim-core-4.1/Applications/opensense/ |
| H A D | opensense.cpp | 129 std::string markerFile{ argv[i + 1] }; in main() local
|
| /dports/astro/xplanet/xplanet-1.3.1/src/ |
| H A D | PlanetProperties.h | 76 void AddMarkerFile(const std::string &markerFile) { markerFiles_.push_back(markerFile); }; in AddMarkerFile()
|
| /dports/www/firefox-legacy/firefox-52.8.0esr/toolkit/crashreporter/ |
| H A D | nsExceptionHandler.cpp | 875 PlatformWriter markerFile(crashMarkerFilename); in MinidumpCallback() local
1994 nsCOMPtr<nsIFile> markerFile; in SetupExtraData() local
|
| /dports/devel/thrift/thrift-0.14.0/lib/as3/gradle/wrapper/ |
| H A D | gradle-wrapper.jar | META-INF/
META-INF/MANIFEST.MF
org/
org/gradle/
org/ ... |
| /dports/devel/thrift/thrift-0.14.0/lib/java/gradle/wrapper/ |
| H A D | gradle-wrapper.jar | META-INF/
META-INF/MANIFEST.MF
org/
org/gradle/
org/ ... |
| /dports/lang/spidermonkey78/firefox-78.9.0/dom/indexedDB/ |
| H A D | ActorsParent.cpp | 9444 nsCOMPtr<nsIFile> markerFile; in CreateMarkerFile() local
9501 nsCOMPtr<nsIFile> markerFile; in RemoveDatabaseFilesAndDirectory() local
21169 nsCOMPtr<nsIFile> markerFile; in DoDatabaseWork() local
|