| Name | Date | Size | #Lines | LOC | ||
|---|---|---|---|---|---|---|
| .. | 03-May-2022 | - | ||||
| plot/ | H | 11-Aug-2019 | - | 1,956 | 1,159 | |
| test/ | H | 11-Aug-2019 | - | 679 | 361 | |
| util/ | H | 11-Aug-2019 | - | 1,149 | 776 | |
| DATA_CONFIG | H A D | 11-Aug-2019 | 214 | 1 | 1 | |
| PCA.py | H A D | 11-Aug-2019 | 4.5 KiB | 124 | 75 | |
| VERSION | H A D | 11-Aug-2019 | 1.2 KiB | 37 | 28 | |
| __init__.py | H A D | 11-Aug-2019 | 0 | 1 | 0 | |
| aminoAcidIdentity.py | H A D | 11-Aug-2019 | 6.4 KiB | 162 | 102 | |
| binComparer.py | H A D | 11-Aug-2019 | 8.5 KiB | 205 | 146 | |
| binStatistics.py | H A D | 11-Aug-2019 | 11.1 KiB | 291 | 195 | |
| binTools.py | H A D | 11-Aug-2019 | 11.5 KiB | 297 | 198 | |
| binUnion.py | H A D | 11-Aug-2019 | 10.9 KiB | 208 | 134 | |
| checkmData.py | H A D | 11-Aug-2019 | 8.7 KiB | 204 | 130 | |
| common.py | H A D | 11-Aug-2019 | 4.6 KiB | 141 | 86 | |
| coverage.py | H A D | 11-Aug-2019 | 14.3 KiB | 355 | 241 | |
| coverageWindows.py | H A D | 11-Aug-2019 | 10.3 KiB | 252 | 169 | |
| customHelpFormatter.py | H A D | 11-Aug-2019 | 3.8 KiB | 87 | 49 | |
| defaultValues.py | H A D | 11-Aug-2019 | 4.1 KiB | 98 | 50 | |
| fileEntity.py | H A D | 11-Aug-2019 | 4.4 KiB | 98 | 40 | |
| genomicSignatures.py | H A D | 11-Aug-2019 | 6.8 KiB | 201 | 123 | |
| hmmer.py | H A D | 11-Aug-2019 | 11.6 KiB | 294 | 227 | |
| hmmerAligner.py | H A D | 11-Aug-2019 | 22 KiB | 528 | 350 | |
| hmmerModelParser.py | H A D | 11-Aug-2019 | 6 KiB | 130 | 91 | |
| logger.py | H A D | 11-Aug-2019 | 4 KiB | 91 | 58 | |
| main.py | H A D | 11-Aug-2019 | 49 KiB | 1,211 | 847 | |
| manifestManager.py | H A D | 11-Aug-2019 | 16.1 KiB | 373 | 265 | |
| markerGeneFinder.py | H A D | 11-Aug-2019 | 6.8 KiB | 174 | 103 | |
| markerSets.py | H A D | 11-Aug-2019 | 19.8 KiB | 541 | 368 | |
| merger.py | H A D | 11-Aug-2019 | 5.7 KiB | 111 | 62 | |
| pplacer.py | H A D | 11-Aug-2019 | 6.7 KiB | 149 | 85 | |
| prettytable.py | H A D | 11-Aug-2019 | 52.9 KiB | 1,476 | 1,102 | |
| prodigal.py | H A D | 11-Aug-2019 | 8.7 KiB | 228 | 138 | |
| profile.py | H A D | 11-Aug-2019 | 5.7 KiB | 145 | 90 | |
| resultsParser.py | H A D | 11-Aug-2019 | 40.8 KiB | 921 | 683 | |
| ssuFinder.py | H A D | 11-Aug-2019 | 10.8 KiB | 274 | 187 | |
| taxonParser.py | H A D | 11-Aug-2019 | 4.8 KiB | 116 | 69 | |
| timeKeeper.py | H A D | 11-Aug-2019 | 2.2 KiB | 50 | 22 | |
| treeParser.py | H A D | 11-Aug-2019 | 33.1 KiB | 767 | 520 | |
| unbinned.py | H A D | 11-Aug-2019 | 3.7 KiB | 86 | 43 | |
| uniqueMarkers.py | H A D | 11-Aug-2019 | 6.5 KiB | 161 | 105 |