Searched refs:BCF_HL_FMT (Results 101 – 101 of 101) sorted by relevance
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| /dports/biology/py-pysam/pysam-0.18.0/pysam/ |
| H A D | libcbcf.c | 9063 __pyx_t_1 = ((__pyx_v_hl_type == BCF_HL_FMT) != 0); in __pyx_f_5pysam_7libcbcf_bcf_get_value_count()
10119 __pyx_t_1 = ((__pyx_v_hl_type == BCF_HL_FMT) != 0); in __pyx_f_5pysam_7libcbcf_bcf_check_values()
12972 …e_count(((struct __pyx_obj_5pysam_7libcbcf_VariantRecord *)__pyx_t_7), BCF_HL_FMT, __pyx_v_fmt->id… in __pyx_f_5pysam_7libcbcf_bcf_format_get_value()
13414 __pyx_t_1 = ((((kh_val(__pyx_v_d, __pyx_v_k).info[BCF_HL_FMT]) & 0xF) == 0xF) != 0); in __pyx_f_5pysam_7libcbcf_bcf_format_set_value()
13478 …__pyx_t_2 = ((!(__pyx_f_5pysam_7libcbcf_check_header_id(__pyx_v_hdr, BCF_HL_FMT, __pyx_v_fmt_id) !… in __pyx_f_5pysam_7libcbcf_bcf_format_set_value()
13510 __pyx_v_fmt_type = bcf_hdr_id2type(__pyx_v_hdr, BCF_HL_FMT, __pyx_v_fmt_id); in __pyx_f_5pysam_7libcbcf_bcf_format_set_value()
13630 …cbcf_VariantRecord *)__pyx_t_3), __pyx_v_value, __pyx_v_sample->index, BCF_HL_FMT, __pyx_v_fmt_typ… in __pyx_f_5pysam_7libcbcf_bcf_format_set_value()
14247 …e_count(((struct __pyx_obj_5pysam_7libcbcf_VariantRecord *)__pyx_t_3), BCF_HL_FMT, __pyx_v_fmt->id… in __pyx_f_5pysam_7libcbcf_bcf_format_del_value()
23713 __pyx_t_1 = ((__pyx_v_type != BCF_HL_FMT) != 0); in __pyx_f_5pysam_7libcbcf_makeVariantMetadata()
33058 …ject *)__pyx_f_5pysam_7libcbcf_makeVariantHeaderMetadata(__pyx_v_self, BCF_HL_FMT)); if (unlikely(… in __pyx_pf_5pysam_7libcbcf_13VariantHeader_7formats___get__()
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