|
Name |
|
Date |
Size |
#Lines |
LOC |
| .. | | 03-May-2022 | - |
| include/ | H | 16-Nov-2021 | - | 1 | 0 |
| Pileup.py | H A D | 16-Nov-2021 | 8.8 KiB | 283 | 212 |
| __init__.py | H A D | 16-Nov-2021 | 3.2 KiB | 101 | 75 |
| bcftools.py | H A D | 16-Nov-2021 | 487 | 29 | 25 |
| cbcftools_util.h | H A D | 16-Nov-2021 | 102 | 7 | 4 |
| csamtools_util.h | H A D | 16-Nov-2021 | 102 | 7 | 4 |
| htslib_util.c | H A D | 16-Nov-2021 | 3.2 KiB | 160 | 112 |
| htslib_util.h | H A D | 16-Nov-2021 | 2.5 KiB | 98 | 50 |
| libcalignedsegment.c | H A D | 16-Nov-2021 | 2.6 MiB | 69,435 | 40,074 |
| libcalignedsegment.pxd | H A D | 16-Nov-2021 | 2.9 KiB | 104 | 79 |
| libcalignedsegment.pyx | H A D | 16-Nov-2021 | 108 KiB | 3,306 | 2,744 |
| libcalignmentfile.c | H A D | 16-Nov-2021 | 1.9 MiB | 47,100 | 29,258 |
| libcalignmentfile.pxd | H A D | 16-Nov-2021 | 3.4 KiB | 153 | 113 |
| libcalignmentfile.pyx | H A D | 16-Nov-2021 | 102 KiB | 2,989 | 2,401 |
| libcbcf.c | H A D | 16-Nov-2021 | 3.6 MiB | 95,635 | 57,743 |
| libcbcf.pxd | H A D | 16-Nov-2021 | 3.9 KiB | 142 | 93 |
| libcbcf.pyx | H A D | 16-Nov-2021 | 140.3 KiB | 4,480 | 3,483 |
| libcbcftools.c | H A D | 16-Nov-2021 | 103 KiB | 2,672 | 2,427 |
| libcbcftools.pxd | H A D | 16-Nov-2021 | 308 | 10 | 8 |
| libcbcftools.pyx | H A D | 16-Nov-2021 | 28 | 3 | 2 |
| libcbgzf.c | H A D | 16-Nov-2021 | 361.1 KiB | 9,612 | 6,718 |
| libcbgzf.pyx | H A D | 16-Nov-2021 | 7.3 KiB | 239 | 180 |
| libcfaidx.c | H A D | 16-Nov-2021 | 672.3 KiB | 17,312 | 11,912 |
| libcfaidx.pxd | H A D | 16-Nov-2021 | 2.1 KiB | 81 | 62 |
| libcfaidx.pyx | H A D | 16-Nov-2021 | 20.7 KiB | 675 | 540 |
| libchtslib.c | H A D | 16-Nov-2021 | 772.8 KiB | 20,328 | 13,709 |
| libchtslib.pxd | H A D | 16-Nov-2021 | 102.5 KiB | 2,612 | 2,213 |
| libchtslib.pyx | H A D | 16-Nov-2021 | 22 KiB | 724 | 563 |
| libcsamfile.c | H A D | 16-Nov-2021 | 244.7 KiB | 6,270 | 4,754 |
| libcsamfile.pxd | H A D | 16-Nov-2021 | 1.5 KiB | 46 | 36 |
| libcsamfile.pyx | H A D | 16-Nov-2021 | 869 | 44 | 31 |
| libcsamtools.c | H A D | 16-Nov-2021 | 103 KiB | 2,668 | 2,427 |
| libcsamtools.pxd | H A D | 16-Nov-2021 | 308 | 10 | 8 |
| libcsamtools.pyx | H A D | 16-Nov-2021 | 28 | 3 | 2 |
| libctabix.c | H A D | 16-Nov-2021 | 1.1 MiB | 27,576 | 18,237 |
| libctabix.pxd | H A D | 16-Nov-2021 | 2.6 KiB | 128 | 86 |
| libctabix.pyx | H A D | 16-Nov-2021 | 42.3 KiB | 1,303 | 1,033 |
| libctabixproxies.c | H A D | 16-Nov-2021 | 1,020.7 KiB | 25,954 | 18,277 |
| libctabixproxies.pxd | H A D | 16-Nov-2021 | 1.3 KiB | 66 | 44 |
| libctabixproxies.pyx | H A D | 16-Nov-2021 | 24.5 KiB | 837 | 672 |
| libcutils.c | H A D | 16-Nov-2021 | 545.1 KiB | 14,215 | 10,329 |
| libcutils.pxd | H A D | 16-Nov-2021 | 1.5 KiB | 35 | 27 |
| libcutils.pyx | H A D | 16-Nov-2021 | 14.3 KiB | 468 | 383 |
| libcvcf.c | H A D | 16-Nov-2021 | 1.7 MiB | 40,713 | 30,413 |
| libcvcf.pyx | H A D | 16-Nov-2021 | 51 KiB | 1,204 | 1,053 |
| pysam_stream.h | H A D | 16-Nov-2021 | 255 | 14 | 5 |
| pysam_util.c | H A D | 16-Nov-2021 | 704 | 37 | 23 |
| pysam_util.h | H A D | 16-Nov-2021 | 51 | 6 | 3 |
| samtools.py | H A D | 16-Nov-2021 | 1.6 KiB | 53 | 46 |
| utils.py | H A D | 16-Nov-2021 | 3.4 KiB | 112 | 85 |
| version.h | H A D | 16-Nov-2021 | 196 | 6 | 3 |
| version.py | H A D | 16-Nov-2021 | 143 | 7 | 4 |