/dports/biology/bio-mocha/bcftools-1.14/test/ |
H A D | fill-tags.3.out | 15 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 38 …dDistBias DP4=125718,95950,113812,80890;DP=461867;HWE=0.24036;ICF=0.01738;INDEL;IS=374,0.937343;MQ… 41 20 271225 . T TTTA,TA 999 StrandBias DP4=29281,42401,27887,29245;DP=272732;INDEL;IS=95,0.748031;MQ=… 43 20 326891 . A AC 999 PASS DP4=125718,95950,113812,80890;DP=461867;HWE=0.24036;ICF=0.01738;INDEL;IS=…
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H A D | fill-tags.5.out | 15 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 38 …;EndDistBias DP4=125718,95950,113812,80890;DP=306;HWE=0.24036;ICF=0.01738;INDEL;IS=374,0.937343;MQ… 41 20 271225 . T TTTA,TA 999 StrandBias DP4=29281,42401,27887,29245;DP=131;INDEL;IS=95,0.748031;MQ=47;… 43 20 326891 . A AC 999 PASS DP4=125718,95950,113812,80890;DP=228;HWE=0.24036;ICF=0.01738;INDEL;IS=374…
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H A D | fill-AN-AC.out | 20 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 27 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;INDEL;STR=test;AN=4;AC=2 GT:GQ:DP:GL 0/1:409:35:-20,-5,-…
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H A D | mpileup.cals.1.vcf | 5 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 26 6 263708 . CTTTTTTTTTTTTTT CTTTTTTTTTTTTT,CTTTTTTTTTTTTTTT,CTTTTTTTTTTTT 0 . INDEL;IDV=27;IMF=0.127…
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H A D | annotate.vcf | 21 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 26 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;AN=4;AC=2;INDEL;STR=test GT:GQ:DP:GL 0/1:409:35:-20,-5,-…
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H A D | filter.2.vcf | 20 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 25 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;AN=4;AC=2;INDEL;STR=test GT:GQ:DP:GL 0/1:25:35:-20,-5,-2…
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H A D | merge.a.vcf | 20 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 25 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;AN=4;AC=2;INDEL;STR=test GT:GQ:DP:GL 0/1:409:35:-20,-5,-…
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/dports/biology/bcftools/bcftools-1.14/test/ |
H A D | fill-tags.2.out | 15 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 39 …dDistBias DP4=125718,95950,113812,80890;DP=461867;HWE=0.24036;ICF=0.01738;INDEL;IS=374,0.937343;MQ… 42 20 271225 . T TTTA,TA 999 StrandBias DP4=29281,42401,27887,29245;DP=272732;INDEL;IS=95,0.748031;MQ=… 44 20 326891 . A AC 999 PASS DP4=125718,95950,113812,80890;DP=461867;HWE=0.24036;ICF=0.01738;INDEL;IS=…
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H A D | fill-tags.3.out | 15 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 38 …dDistBias DP4=125718,95950,113812,80890;DP=461867;HWE=0.24036;ICF=0.01738;INDEL;IS=374,0.937343;MQ… 41 20 271225 . T TTTA,TA 999 StrandBias DP4=29281,42401,27887,29245;DP=272732;INDEL;IS=95,0.748031;MQ=… 43 20 326891 . A AC 999 PASS DP4=125718,95950,113812,80890;DP=461867;HWE=0.24036;ICF=0.01738;INDEL;IS=…
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H A D | fill-tags.5.out | 15 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 38 …;EndDistBias DP4=125718,95950,113812,80890;DP=306;HWE=0.24036;ICF=0.01738;INDEL;IS=374,0.937343;MQ… 41 20 271225 . T TTTA,TA 999 StrandBias DP4=29281,42401,27887,29245;DP=131;INDEL;IS=95,0.748031;MQ=47;… 43 20 326891 . A AC 999 PASS DP4=125718,95950,113812,80890;DP=228;HWE=0.24036;ICF=0.01738;INDEL;IS=374…
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H A D | annotate.vcf | 21 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 26 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;AN=4;AC=2;INDEL;STR=test GT:GQ:DP:GL 0/1:409:35:-20,-5,-…
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H A D | fill-AN-AC.out | 20 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 27 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;INDEL;STR=test;AN=4;AC=2 GT:GQ:DP:GL 0/1:409:35:-20,-5,-…
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H A D | filter.2.vcf | 20 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 25 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;AN=4;AC=2;INDEL;STR=test GT:GQ:DP:GL 0/1:25:35:-20,-5,-2…
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H A D | merge.a.vcf | 20 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 25 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;AN=4;AC=2;INDEL;STR=test GT:GQ:DP:GL 0/1:409:35:-20,-5,-…
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H A D | mpileup.cals.1.vcf | 5 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 26 6 263708 . CTTTTTTTTTTTTTT CTTTTTTTTTTTTT,CTTTTTTTTTTTTTTT,CTTTTTTTTTTTT 0 . INDEL;IDV=27;IMF=0.127…
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/dports/biology/vt/vt-0.57721/lib/htslib/test/tabix/ |
H A D | vcf_file.vcf | 20 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 25 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;AN=4;AC=2;INDEL;STR=test GT:GQ:DP:GL 0/1:409:35:-20,-5,-…
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/dports/biology/bio-mocha/bcftools-1.14/test/mpileup/ |
H A D | indel-AD.3.out | 5 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 24 11 75 . GTAAAATAAAATAAAATAAAATAAA GTAAAATAAAATAAAATAAAATAAAATAAA 0 . INDEL;IDV=6;IMF=0.0882353;DP=6…
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H A D | indel-AD.2.out | 5 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 24 11 75 . GTAAAATAAAATAAAATAAAATAAA GTAAAATAAAATAAAATAAAATAAAATAAA 0 . INDEL;IDV=6;IMF=0.0882353;DP=6…
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H A D | indel-AD.4.out | 5 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 24 11 75 . GTAAAATAAAATAAAATAAAATAAA GTAAAATAAAATAAAATAAAATAAAATAAA 0 . INDEL;IDV=6;IMF=0.0882353;DP=6…
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/dports/biology/bcftools/bcftools-1.14/test/mpileup/ |
H A D | indel-AD.2.out | 5 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 24 11 75 . GTAAAATAAAATAAAATAAAATAAA GTAAAATAAAATAAAATAAAATAAAATAAA 0 . INDEL;IDV=6;IMF=0.0882353;DP=6…
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H A D | indel-AD.4.out | 5 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 24 11 75 . GTAAAATAAAATAAAATAAAATAAA GTAAAATAAAATAAAATAAAATAAAATAAA 0 . INDEL;IDV=6;IMF=0.0882353;DP=6…
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H A D | indel-AD.3.out | 5 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 24 11 75 . GTAAAATAAAATAAAATAAAATAAA GTAAAATAAAATAAAATAAAATAAAATAAA 0 . INDEL;IDV=6;IMF=0.0882353;DP=6…
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/dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/test/tabix/ |
H A D | vcf_file.vcf | 21 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 26 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;AN=4;AC=2;INDEL;STR=test GT:GQ:DP:GL 0/1:409:35:-20,-5,-…
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/dports/biology/kallisto/kallisto-0.46.1/ext/htslib/test/tabix/ |
H A D | vcf_file.vcf | 20 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 25 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;AN=4;AC=2;INDEL;STR=test GT:GQ:DP:GL 0/1:409:35:-20,-5,-…
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/dports/biology/htslib/htslib-1.14/test/tabix/ |
H A D | vcf_file.vcf | 21 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL."> 26 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;AN=4;AC=2;INDEL;STR=test GT:GQ:DP:GL 0/1:409:35:-20,-5,-…
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