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Searched refs:INDEL (Results 101 – 125 of 418) sorted by relevance

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/dports/biology/bio-mocha/bcftools-1.14/test/
H A Dfill-tags.3.out15 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
38 …dDistBias DP4=125718,95950,113812,80890;DP=461867;HWE=0.24036;ICF=0.01738;INDEL;IS=374,0.937343;MQ…
41 20 271225 . T TTTA,TA 999 StrandBias DP4=29281,42401,27887,29245;DP=272732;INDEL;IS=95,0.748031;MQ=…
43 20 326891 . A AC 999 PASS DP4=125718,95950,113812,80890;DP=461867;HWE=0.24036;ICF=0.01738;INDEL;IS=…
H A Dfill-tags.5.out15 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
38 …;EndDistBias DP4=125718,95950,113812,80890;DP=306;HWE=0.24036;ICF=0.01738;INDEL;IS=374,0.937343;MQ…
41 20 271225 . T TTTA,TA 999 StrandBias DP4=29281,42401,27887,29245;DP=131;INDEL;IS=95,0.748031;MQ=47;…
43 20 326891 . A AC 999 PASS DP4=125718,95950,113812,80890;DP=228;HWE=0.24036;ICF=0.01738;INDEL;IS=374…
H A Dfill-AN-AC.out20 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
27 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;INDEL;STR=test;AN=4;AC=2 GT:GQ:DP:GL 0/1:409:35:-20,-5,-…
H A Dmpileup.cals.1.vcf5 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
26 6 263708 . CTTTTTTTTTTTTTT CTTTTTTTTTTTTT,CTTTTTTTTTTTTTTT,CTTTTTTTTTTTT 0 . INDEL;IDV=27;IMF=0.127…
H A Dannotate.vcf21 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
26 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;AN=4;AC=2;INDEL;STR=test GT:GQ:DP:GL 0/1:409:35:-20,-5,-…
H A Dfilter.2.vcf20 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
25 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;AN=4;AC=2;INDEL;STR=test GT:GQ:DP:GL 0/1:25:35:-20,-5,-2…
H A Dmerge.a.vcf20 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
25 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;AN=4;AC=2;INDEL;STR=test GT:GQ:DP:GL 0/1:409:35:-20,-5,-…
/dports/biology/bcftools/bcftools-1.14/test/
H A Dfill-tags.2.out15 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
39 …dDistBias DP4=125718,95950,113812,80890;DP=461867;HWE=0.24036;ICF=0.01738;INDEL;IS=374,0.937343;MQ…
42 20 271225 . T TTTA,TA 999 StrandBias DP4=29281,42401,27887,29245;DP=272732;INDEL;IS=95,0.748031;MQ=…
44 20 326891 . A AC 999 PASS DP4=125718,95950,113812,80890;DP=461867;HWE=0.24036;ICF=0.01738;INDEL;IS=…
H A Dfill-tags.3.out15 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
38 …dDistBias DP4=125718,95950,113812,80890;DP=461867;HWE=0.24036;ICF=0.01738;INDEL;IS=374,0.937343;MQ…
41 20 271225 . T TTTA,TA 999 StrandBias DP4=29281,42401,27887,29245;DP=272732;INDEL;IS=95,0.748031;MQ=…
43 20 326891 . A AC 999 PASS DP4=125718,95950,113812,80890;DP=461867;HWE=0.24036;ICF=0.01738;INDEL;IS=…
H A Dfill-tags.5.out15 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
38 …;EndDistBias DP4=125718,95950,113812,80890;DP=306;HWE=0.24036;ICF=0.01738;INDEL;IS=374,0.937343;MQ…
41 20 271225 . T TTTA,TA 999 StrandBias DP4=29281,42401,27887,29245;DP=131;INDEL;IS=95,0.748031;MQ=47;…
43 20 326891 . A AC 999 PASS DP4=125718,95950,113812,80890;DP=228;HWE=0.24036;ICF=0.01738;INDEL;IS=374…
H A Dannotate.vcf21 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
26 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;AN=4;AC=2;INDEL;STR=test GT:GQ:DP:GL 0/1:409:35:-20,-5,-…
H A Dfill-AN-AC.out20 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
27 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;INDEL;STR=test;AN=4;AC=2 GT:GQ:DP:GL 0/1:409:35:-20,-5,-…
H A Dfilter.2.vcf20 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
25 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;AN=4;AC=2;INDEL;STR=test GT:GQ:DP:GL 0/1:25:35:-20,-5,-2…
H A Dmerge.a.vcf20 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
25 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;AN=4;AC=2;INDEL;STR=test GT:GQ:DP:GL 0/1:409:35:-20,-5,-…
H A Dmpileup.cals.1.vcf5 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
26 6 263708 . CTTTTTTTTTTTTTT CTTTTTTTTTTTTT,CTTTTTTTTTTTTTTT,CTTTTTTTTTTTT 0 . INDEL;IDV=27;IMF=0.127…
/dports/biology/vt/vt-0.57721/lib/htslib/test/tabix/
H A Dvcf_file.vcf20 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
25 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;AN=4;AC=2;INDEL;STR=test GT:GQ:DP:GL 0/1:409:35:-20,-5,-…
/dports/biology/bio-mocha/bcftools-1.14/test/mpileup/
H A Dindel-AD.3.out5 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
24 11 75 . GTAAAATAAAATAAAATAAAATAAA GTAAAATAAAATAAAATAAAATAAAATAAA 0 . INDEL;IDV=6;IMF=0.0882353;DP=6…
H A Dindel-AD.2.out5 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
24 11 75 . GTAAAATAAAATAAAATAAAATAAA GTAAAATAAAATAAAATAAAATAAAATAAA 0 . INDEL;IDV=6;IMF=0.0882353;DP=6…
H A Dindel-AD.4.out5 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
24 11 75 . GTAAAATAAAATAAAATAAAATAAA GTAAAATAAAATAAAATAAAATAAAATAAA 0 . INDEL;IDV=6;IMF=0.0882353;DP=6…
/dports/biology/bcftools/bcftools-1.14/test/mpileup/
H A Dindel-AD.2.out5 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
24 11 75 . GTAAAATAAAATAAAATAAAATAAA GTAAAATAAAATAAAATAAAATAAAATAAA 0 . INDEL;IDV=6;IMF=0.0882353;DP=6…
H A Dindel-AD.4.out5 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
24 11 75 . GTAAAATAAAATAAAATAAAATAAA GTAAAATAAAATAAAATAAAATAAAATAAA 0 . INDEL;IDV=6;IMF=0.0882353;DP=6…
H A Dindel-AD.3.out5 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
24 11 75 . GTAAAATAAAATAAAATAAAATAAA GTAAAATAAAATAAAATAAAATAAAATAAA 0 . INDEL;IDV=6;IMF=0.0882353;DP=6…
/dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/test/tabix/
H A Dvcf_file.vcf21 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
26 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;AN=4;AC=2;INDEL;STR=test GT:GQ:DP:GL 0/1:409:35:-20,-5,-…
/dports/biology/kallisto/kallisto-0.46.1/ext/htslib/test/tabix/
H A Dvcf_file.vcf20 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
25 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;AN=4;AC=2;INDEL;STR=test GT:GQ:DP:GL 0/1:409:35:-20,-5,-…
/dports/biology/htslib/htslib-1.14/test/tabix/
H A Dvcf_file.vcf21 ##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
26 1 3062915 id3D GTTT G 12.9 q10 DP4=1,2,3,4;AN=4;AC=2;INDEL;STR=test GT:GQ:DP:GL 0/1:409:35:-20,-5,-…

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