| /dports/biology/emboss/EMBOSS-6.6.0/emboss/ |
| H A D | pepnet.c | 152 ajFmtPrintS(&txt,"%d",i+1); in main()
|
| H A D | patmatmotifs.c | 154 ajFmtPrintS(&tmpstr, "*motif %S", name); in main()
|
| H A D | embossdata.c | 312 ajFmtPrintS(&tmp,"%Sshare/EMBOSS/data/",where); in embossdata_data_dir()
|
| H A D | checktrans.c | 223 ajFmtPrintS(&nm,"%s_%d",name,count); in checktrans_ajbseq()
|
| H A D | showalign.c | 1053 ajFmtPrintS(&numstr, "-%d", j); in showalign_OutputNums()
1082 ajFmtPrintS(&numstr, "+%d", j); in showalign_OutputNums()
1248 ajFmtPrintS(&marginfmt, "%%-%d.%dS", margin, margin); in showalign_OutputSeq()
|
| H A D | jembossctl.c | 2499 ajFmtPrintS(&full,"%S%s",dir,dp->d_name); in jembossctl_do_listfiles()
2698 ajFmtPrintS(&full,"%S%s",dir,dp->d_name); in jembossctl_do_listdirs()
2794 ajFmtPrintS(&message,"-1"); in jembossctl_do_getfile()
2821 ajFmtPrintS(&message,"-1"); in jembossctl_do_getfile()
2840 ajFmtPrintS(&message,"-1"); in jembossctl_do_getfile()
2860 ajFmtPrintS(&message,"-1"); in jembossctl_do_getfile()
2896 ajFmtPrintS(&message,"%d",n); in jembossctl_do_getfile()
3963 ajFmtPrintS(&tmp,"%S %d %d:%d:%d %d",mon,day,hr,min,sec,yr); in jembossctl_Datestr()
|
| H A D | einverted.c | 461 ajFmtPrintS(&tempname, "%S_%d_%d_rev", in main()
466 ajFmtPrintS(&tempname, "%S_%d_%d", in main()
|
| H A D | dbxgcg.c | 290 ajFmtPrintS(&dbxgcgTmpstr,"%S%S",entry->directory,thysfile); in main()
296 ajFmtPrintS(&dbxgcgTmpstr,"%S%S",entry->directory,thysfile); in main()
804 ajFmtPrintS(&testlibstr, "%s_",p); in dbxgcg_gcgappent()
|
| H A D | polydot.c | 213 ajFmtPrintS(&sajb,"%3u %6d %5d %6d %s",i+1, in main()
|
| H A D | dbigcg.c | 283 ajFmtPrintS(&datestr, "%D", ajTimeRefTodayFmt("dbindex")); in main()
317 ajFmtPrintS(&reffiles[ifile], "%F", libr); in main()
319 ajFmtPrintS(&seqfiles[ifile], "%F", libs); in main()
1011 ajFmtPrintS(&testlibstr, "%s_",p); in dbigcg_gcgappent()
|
| H A D | dottup.c | 343 ajFmtPrintS(&tit,"%S",ajGraphGetTitleS(graph)); in dottup_stretchplot()
|
| H A D | sixpack.c | 410 ajFmtPrintS(&nm, "%s_ORF%d Translation of %s in frame %d, ORF %d, " in sixpackPrintseq()
|
| H A D | emma.c | 503 ajFmtPrintS(&filename, "%08d%s",getpid(), ext); in emma_getUniqueFileName()
|
| H A D | dbxobo.c | 171 ajFmtPrintS(&tmpstr,"%S%S",entry->directory,thysfile); in main()
|
| H A D | dbiblast.c | 473 ajFmtPrintS(&datestr, "%D", ajTimeRefTodayFmt("dbindex")); in main()
1192 ajFmtPrintS(&dbiblastGTmpT, ">%S", line); in dbiblast_parseNcbi()
1749 ajFmtPrintS(&suffix, ".%s", suff); in dbiblast_dbname()
|
| /dports/biology/emboss/EMBOSS-6.6.0/ajax/core/ |
| H A D | ajdomain.c | 616 ajFmtPrintS(&scopcla->Start[i], "%d", from); in domainScopclaReadC()
617 ajFmtPrintS(&scopcla->End[i], "%d", to); in domainScopclaReadC()
621 ajFmtPrintS(&scopcla->Start[i], "%d", from); in domainScopclaReadC()
622 ajFmtPrintS(&scopcla->End[i], "%d", to); in domainScopclaReadC()
1642 ajFmtPrintS(&tmpNumString, "%d.%d.%d.%d", intC, intA, intT, intH); in ajCathReadAllRawNew()
1674 ajFmtPrintS(&tmpNumString, "%d.%d.%d", intC, intA, intT); in ajCathReadAllRawNew()
1724 ajFmtPrintS(&tmpNumString, "%04d.%04d", intC, intA); in ajCathReadAllRawNew()
1758 ajFmtPrintS(&tmpNumString, "%04d", intC); in ajCathReadAllRawNew()
|
| H A D | ajassemwrite.c | 257 ajFmtPrintS(&headertext, "@HD\tVN:1.3\tSO:%s\n", in assemoutWriteBam()
403 ajFmtPrintS(&headertext, "@HD\tVN:1.3\tSO:%s\n", in assemoutWriteNextBam()
1473 ajFmtPrintS(&CIGAR, "%dS%S", in assemoutWriteSamAlignment()
1481 ajFmtPrintS(&CIGAR, "%dS%S", r->x2 - 1, tmp); in assemoutWriteSamAlignment()
|
| H A D | ajphylo.c | 1391 ajFmtPrintS(&proppat, "\\S+"); in ajPhyloPropRead()
1393 ajFmtPrintS(&proppat, "[%S]+", propchars); in ajPhyloPropRead()
1617 ajFmtPrintS(&charpat, "\\S+"); in ajPhyloStateRead()
1619 ajFmtPrintS(&charpat, "[%S]+", statechars); in ajPhyloStateRead()
|
| H A D | ajresourcewrite.c | 725 ajFmtPrintS(&snstr, "%%s%u", (i+1)); in resourceoutWriteWebpage()
734 ajFmtPrintS(&snstr, "%%s"); in resourceoutWriteWebpage()
|
| H A D | ajtable.c | 1534 ajFmtPrintS(Pstr, "key '%s' (char*)", in tableStrFromKey()
1539 ajFmtPrintS(Pstr, "key '%d' (int)", in tableStrFromKey()
1544 ajFmtPrintS(Pstr, "key '%Ld' (int)", in tableStrFromKey()
1549 ajFmtPrintS(Pstr, "key '%S' (string)", in tableStrFromKey()
1554 ajFmtPrintS(Pstr, "key '%u' (unsigned int)", in tableStrFromKey()
1559 ajFmtPrintS(Pstr, "key '%Lu' (unsigned long)", in tableStrFromKey()
1564 ajFmtPrintS(Pstr, "key '%x' (unknown)", in tableStrFromKey()
|
| H A D | ajnam.c | 973 ajFmtPrintS(&tmpstr, "\"%s\"", namSvrAttrs[i].Defval); in ajNamPrintSvrAttr()
1021 ajFmtPrintS(&tmpstr, "\"%s\"", namDbAttrs[i].Defval); in ajNamPrintDbAttr()
1069 ajFmtPrintS(&tmpstr, "\"%s\"", namRsAttrs[i].Defval); in ajNamPrintRsAttr()
1934 ajFmtPrintS(cachefile, "%F", cacheopen); in ajNamSvrDetails()
5257 ajFmtPrintS(&namFileName, "%F",cachefile); in namSvrCacheParse()
5412 ajFmtPrintS(&saveshortname, "%F", cachefile); in namSvrCacheParseList()
5660 ajFmtPrintS(&namFileName, "%F", in namSvrCacheParseList()
6323 ajFmtPrintS(&namFileName, "%F", file); in namProcessFile()
6649 ajFmtPrintS(&namStandardDir, "%s", in ajNamInit()
6654 ajFmtPrintS(&namStandardDir, "%s%sshare%s%S", in ajNamInit()
[all …]
|
| H A D | ajresource.c | 591 ajFmtPrintS(qry, "%S-id:%S", thys->Db, thys->Id); in resourceMakeQry()
594 ajFmtPrintS(qry, "%S::%S:%S", thys->Formatstr, in resourceMakeQry()
|
| H A D | ajmess.c | 1800 ajFmtPrintS(&messDebugName, "%s.dbg", ajStrGetPtr(acdProgram)); in ajDebug()
1901 ajFmtPrintS(&filename, "%s%s%s", in ajDebugTest()
|
| H A D | ajfiledata.c | 643 ajFmtPrintS(&filedataTmpstr,"%Sshare%c%S%cdata%c", in ajDatafileValuePath()
|
| H A D | ajfeat.c | 2576 ajFmtPrintS(qry, "%S-id:%S", thys->Db, thys->Seqid); in feattableMakeQry()
2579 ajFmtPrintS(qry, "%S::%S:%S", thys->Formatstr, in feattableMakeQry()
4089 ajFmtPrintS(&TagsFName, "Etags.%s", name); in featVocabRead()
4108 ajFmtPrintS(&TypeFName, "Efeatures.%s", name); in featVocabRead()
4260 ajFmtPrintS(&tagstr, "%s;", TagType[numtype]); in featVocabReadTags()
4721 ajFmtPrintS(&editstr, ";%S;", tag); in featVocabReadTypes()
5822 ajFmtPrintS(&featValTmp2, "*%S: %S", tag, value); in ajFeatTagAddSS()
6156 ajFmtPrintS(pval, "(seq:\"%S\",aa:%S)",seqstr, aastr); in featTagSpecialAllCodon()
6371 ajFmtPrintS(pval, "(5'site:%S,3'site:%S)", begstr, endstr); in featTagSpecialAllConssplice()
7562 ajFmtPrintS(Pdefval, "*%S: %S", tag, value); in featTagSetDefaultDna()
[all …]
|