1 #ifndef VIENNA_RNA_PACKAGE_RIBOSUM_H 2 #define VIENNA_RNA_PACKAGE_RIBOSUM_H 3 4 /** 5 * @file ribo.h 6 * @ingroup file_utils 7 * @brief Parse RiboSum Scoring Matrices for Covariance Scoring of Alignments 8 */ 9 10 #ifndef VRNA_DISABLE_BACKWARD_COMPATIBILITY 11 12 /** 13 * @addtogroup file_utils 14 * @{ 15 */ 16 17 /** 18 * @brief Retrieve a RiboSum Scoring Matrix for a given Alignment 19 * \ingroup consensus_fold 20 * 21 */ 22 float **get_ribosum(const char **Alseq, 23 int n_seq, 24 int length); 25 26 27 /** 28 * \brief Read a RiboSum or other user-defined Scoring Matrix and Store into global Memory 29 * 30 */ 31 float **readribosum(char *name); 32 33 34 /** 35 * @} 36 */ 37 #endif 38 39 #endif 40