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Searched refs:Fttable (Results 1 – 15 of 15) sorted by relevance

/dports/biology/emboss/EMBOSS-6.6.0/ajax/core/
H A Dajseqdata.h457 AjPFeattable Fttable; member
634 AjPFeattable Fttable; member
866 AjPFeattable Fttable; member
H A Dajseqwrite.c632 pthis->Fttable = NULL; in ajSeqoutNew()
1012 if(outseq->Fttable) in ajSeqoutWriteSeq()
1112 if(outseq->Fttable) in ajSeqoutWriteSet()
1276 if(listseq->Fttable) in seqWriteListAppend()
1286 if(outseq->Fttable) in seqWriteListAppend()
1302 ajFeattableGetSize(outseq->Fttable)); in seqWriteListAppend()
1324 ajFeattableTrace(outseq->Fttable); in seqWriteListAppend()
10257 outseq->Fttable = seq->Fttable; in seqClone()
10262 if(outseq->Fttable) in seqClone()
10572 if(seqout->Fttable) in ajSeqoutTrace()
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H A Dajseqread.c1612 if(thys->Fttable) in ajSeqinDel()
2085 if(thys->Fttable) in ajSeqinClear()
2747 thys->Fttable = seqin->Fttable; in seqReadFmt()
12230 if(thys->Fttable) in seqReadSwiss()
13314 if(thys->Fttable) in seqReadEmbl()
13562 if(thys->Fttable) in seqReadExperiment()
14249 if(thys->Fttable) in seqReadGenbank()
14861 if(thys->Fttable) in seqReadGenpept()
15416 if(thys->Fttable) in seqReadRefseqp()
15547 thys->Fttable = seqin->Fttable; in seqReadGff2()
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H A Dajseq.c736 if (seq->Fttable) in ajSeqNewSeq()
737 pthis->Fttable = ajFeattableNewFtable(seq->Fttable); in ajSeqNewSeq()
826 if(seq->Fttable) in ajSeqDel()
827 ajFeattableDel(&seq->Fttable); in ajSeqDel()
1782 if(seq->Fttable) in ajSeqClear()
1783 ajFeattableDel(&seq->Fttable); in ajSeqClear()
2412 if(seq->Fttable) in ajSeqReverseDo()
2415 ajFeattableReverse(seq->Fttable); in ajSeqReverseDo()
2601 if(okay && seq->Fttable) in ajSeqTrim()
3016 return seq->Fttable; in ajSeqGetFeat()
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H A Dajseqtype.c1245 if(thys->Fttable) in ajSeqSetNuc()
1246 ajFeattableSetNuc(thys->Fttable); in ajSeqSetNuc()
1278 if(thys->Fttable) in ajSeqSetProt()
1279 ajFeattableSetProt(thys->Fttable); in ajSeqSetProt()
H A Dajreport.h122 AjPFeattable Fttable; member
H A Dajreport.c242 ajFeattableGetSize(thys->Fttable)); in reportWriteTrace()
244 if (thys->Fttable) in reportWriteTrace()
245 ajFeattablePrint(thys->Fttable, thys->File); in reportWriteTrace()
2813 ajFeattableDel(&thys->Fttable); in ajReportDel()
3071 pthis->Fttable = NULL; in ajReportNew()
/dports/biology/emboss/EMBOSS-6.6.0/emboss/
H A Dsplitter.c215 subseq->Fttable = new_feattable; in splitter_ProcessChunk()
222 splitter_AddSubSeqFeat(subseq->Fttable,start,end,seq); in splitter_ProcessChunk()
H A Dsplitsource.c215 subseq->Fttable = new_feattable; in splitsource_ProcessChunk()
221 splitsource_AddSubSeqFeat(subseq->Fttable,gf,seq); in splitsource_ProcessChunk()
H A Dunion.c94 uniseq->Fttable = new_feattable; in main()
H A Densembltest.c2696 if (!seq->Fttable) in ensembltest_sequence()
2697 seq->Fttable = ajFeattableNewSeq(seq); in ensembltest_sequence()
2702 seq->Fttable, in ensembltest_sequence()
/dports/biology/emboss/EMBOSS-6.6.0/ajax/ensembl/
H A Densutility.c467 indent, seq->Fttable, in ensTraceSeq()
648 indent, seqin->Fttable, in ensTraceSeqin()
H A Densexon.c4153 if (!seq->Fttable) in ensSequenceAddFeatureExon()
4197 seq->Fttable, in ensSequenceAddFeatureExon()
H A Densgene.c4010 if (!seq->Fttable) in ensSequenceAddFeatureGene()
4054 seq->Fttable, in ensSequenceAddFeatureGene()
H A Denstranscript.c7596 if (!seq->Fttable) in ensSequenceAddFeatureTranscript()
7641 seq->Fttable, in ensSequenceAddFeatureTranscript()
7682 seq->Fttable, in ensSequenceAddFeatureTranscript()