Searched refs:Fttable (Results 1 – 15 of 15) sorted by relevance
/dports/biology/emboss/EMBOSS-6.6.0/ajax/core/ |
H A D | ajseqdata.h | 457 AjPFeattable Fttable; member 634 AjPFeattable Fttable; member 866 AjPFeattable Fttable; member
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H A D | ajseqwrite.c | 632 pthis->Fttable = NULL; in ajSeqoutNew() 1012 if(outseq->Fttable) in ajSeqoutWriteSeq() 1112 if(outseq->Fttable) in ajSeqoutWriteSet() 1276 if(listseq->Fttable) in seqWriteListAppend() 1286 if(outseq->Fttable) in seqWriteListAppend() 1302 ajFeattableGetSize(outseq->Fttable)); in seqWriteListAppend() 1324 ajFeattableTrace(outseq->Fttable); in seqWriteListAppend() 10257 outseq->Fttable = seq->Fttable; in seqClone() 10262 if(outseq->Fttable) in seqClone() 10572 if(seqout->Fttable) in ajSeqoutTrace() [all …]
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H A D | ajseqread.c | 1612 if(thys->Fttable) in ajSeqinDel() 2085 if(thys->Fttable) in ajSeqinClear() 2747 thys->Fttable = seqin->Fttable; in seqReadFmt() 12230 if(thys->Fttable) in seqReadSwiss() 13314 if(thys->Fttable) in seqReadEmbl() 13562 if(thys->Fttable) in seqReadExperiment() 14249 if(thys->Fttable) in seqReadGenbank() 14861 if(thys->Fttable) in seqReadGenpept() 15416 if(thys->Fttable) in seqReadRefseqp() 15547 thys->Fttable = seqin->Fttable; in seqReadGff2() [all …]
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H A D | ajseq.c | 736 if (seq->Fttable) in ajSeqNewSeq() 737 pthis->Fttable = ajFeattableNewFtable(seq->Fttable); in ajSeqNewSeq() 826 if(seq->Fttable) in ajSeqDel() 827 ajFeattableDel(&seq->Fttable); in ajSeqDel() 1782 if(seq->Fttable) in ajSeqClear() 1783 ajFeattableDel(&seq->Fttable); in ajSeqClear() 2412 if(seq->Fttable) in ajSeqReverseDo() 2415 ajFeattableReverse(seq->Fttable); in ajSeqReverseDo() 2601 if(okay && seq->Fttable) in ajSeqTrim() 3016 return seq->Fttable; in ajSeqGetFeat() [all …]
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H A D | ajseqtype.c | 1245 if(thys->Fttable) in ajSeqSetNuc() 1246 ajFeattableSetNuc(thys->Fttable); in ajSeqSetNuc() 1278 if(thys->Fttable) in ajSeqSetProt() 1279 ajFeattableSetProt(thys->Fttable); in ajSeqSetProt()
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H A D | ajreport.h | 122 AjPFeattable Fttable; member
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H A D | ajreport.c | 242 ajFeattableGetSize(thys->Fttable)); in reportWriteTrace() 244 if (thys->Fttable) in reportWriteTrace() 245 ajFeattablePrint(thys->Fttable, thys->File); in reportWriteTrace() 2813 ajFeattableDel(&thys->Fttable); in ajReportDel() 3071 pthis->Fttable = NULL; in ajReportNew()
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/dports/biology/emboss/EMBOSS-6.6.0/emboss/ |
H A D | splitter.c | 215 subseq->Fttable = new_feattable; in splitter_ProcessChunk() 222 splitter_AddSubSeqFeat(subseq->Fttable,start,end,seq); in splitter_ProcessChunk()
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H A D | splitsource.c | 215 subseq->Fttable = new_feattable; in splitsource_ProcessChunk() 221 splitsource_AddSubSeqFeat(subseq->Fttable,gf,seq); in splitsource_ProcessChunk()
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H A D | union.c | 94 uniseq->Fttable = new_feattable; in main()
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H A D | ensembltest.c | 2696 if (!seq->Fttable) in ensembltest_sequence() 2697 seq->Fttable = ajFeattableNewSeq(seq); in ensembltest_sequence() 2702 seq->Fttable, in ensembltest_sequence()
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/dports/biology/emboss/EMBOSS-6.6.0/ajax/ensembl/ |
H A D | ensutility.c | 467 indent, seq->Fttable, in ensTraceSeq() 648 indent, seqin->Fttable, in ensTraceSeqin()
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H A D | ensexon.c | 4153 if (!seq->Fttable) in ensSequenceAddFeatureExon() 4197 seq->Fttable, in ensSequenceAddFeatureExon()
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H A D | ensgene.c | 4010 if (!seq->Fttable) in ensSequenceAddFeatureGene() 4054 seq->Fttable, in ensSequenceAddFeatureGene()
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H A D | enstranscript.c | 7596 if (!seq->Fttable) in ensSequenceAddFeatureTranscript() 7641 seq->Fttable, in ensSequenceAddFeatureTranscript() 7682 seq->Fttable, in ensSequenceAddFeatureTranscript()
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