| /dports/biology/ncbi-toolkit/ncbi/desktop/ |
| H A D | gbfview.c | 1504 sep = GetBestTopParentForData (entityID, bsp); in PopulateFlatFile()
1506 sep = GetBestTopParentForData (entityID, bsp); in PopulateFlatFile()
1510 sep = GetBestTopParentForData (entityID, bsp); in PopulateFlatFile()
1699 sep = GetBestTopParentForData (entityID, bsp); in PopulateFasta()
1908 sep = GetBestTopParentForData (entityID, bsp); in PopulateQuality()
2013 sep = GetBestTopParentForData (entityID, bsp); in PopulateAsnOrXML()
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| H A D | gphview.c | 709 sep = GetBestTopParentForData (entityID, bsp); in PopulateSimpleGraphic()
919 sep = GetBestTopParentForData (entityID, bsp); in GenomicSentinelProc()
1005 sep = GetBestTopParentForData (entityID, bvp->bsp); in PopulateGraphic()
1523 sep = GetBestTopParentForData (entityID, bsp); in PopulateAlignment()
1607 sep = GetBestTopParentForData (entityID, bsp); in PopulateAlignment()
4016 sep = GetBestTopParentForData (entityID, bsp); in PopulateAsn2GphGraphic()
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| H A D | salpanel.c | 5730 parent_sep = GetBestTopParentForData (entityID, sep->data.ptrvalue); in AddProductForCDS()
5883 parent_sep = GetBestTopParentForData (entityID, sep->data.ptrvalue); in ApplyOneCodingRegion()
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| H A D | saled.c | 3251 nucprot_sep = GetBestTopParentForData (bsp->idx.entityID, bsp); in CorrectAlignmentIDs()
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| H A D | bspview.c | 1428 sep = GetBestTopParentForData (entityID, bsp); in ShortDefFastaFileFunc()
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| H A D | salsa.c | 7002 sep_del=GetBestTopParentForData (entityID, bsp); in delete_bioseqs()
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| /dports/biology/ncbi-toolkit/ncbi/demo/ |
| H A D | reblobber.c | 1313 sep = GetBestTopParentForData (entityID, new_bsp); in CopyFeaturesAndProteins()
1324 sep = GetBestTopParentForData (entityID, new_bsp); in CopyFeaturesAndProteins()
1551 seq_sep = GetBestTopParentForData (orig_entityID, orig_bsp); in StripFeaturesFromSelectedSequences()
1934 seq_sep = GetBestTopParentForData (orig_entityID, orig_bsp); in ProcessSingletons()
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| H A D | sgd2asn.c | 546 sep = GetBestTopParentForData (entityID, bsp); in ProcessOneRecord()
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| /dports/biology/ncbi-toolkit/ncbi/api/ |
| H A D | salprop.c | 820 sep2 = GetBestTopParentForData (af.input_entityID, ci.bsp); in ApplyNewSeqFeat()
1309 sep = GetBestTopParentForData (target_entityID, target_bsp); in MergeFunc()
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| H A D | alignval.c | 631 sep_del=GetBestTopParentForData (entityID, bsp); in delete_bioseqs()
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| H A D | sqnutil4.c | 15882 master = GetBestTopParentForData (sfp->idx.entityID, prot_bsp); in InstantiateMatPeptideProductForProteinFeature()
16172 ExtraCDSCreationActions (sfp, GetBestTopParentForData (bsp->idx.entityID, bsp)); in ConvertMiscFeatToCodingRegion()
16212 ExtraCDSCreationActions (sfp, GetBestTopParentForData (bsp->idx.entityID, bsp)); in ConvertmRNAToCodingRegion()
18685 sep = GetBestTopParentForData (sfp->idx.entityID, BioseqFindFromSeqLoc (sfp->location)); in GetBestSeqEntryForItem()
18693 sep = GetBestTopParentForData (ovp->idx.entityID, ovp->idx.parentptr); in GetBestSeqEntryForItem()
18698 sep = GetBestTopParentForData (bsp->idx.entityID, bsp); in GetBestSeqEntryForItem()
27785 upd_sep = GetBestTopParentForData (input_entityID, upd_bsp); in AddCitSubToUpdatedSequence()
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| H A D | sqnutils.h | 69 NLM_EXTERN SeqEntryPtr LIBCALL GetBestTopParentForData (Uint2 entityID, BioseqPtr bsp);
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| H A D | salutil.c | 1338 sep = GetBestTopParentForData (entityID, ci.bsp); in SeqEntryReplaceSeqID()
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| H A D | sqnutil1.c | 1148 NLM_EXTERN SeqEntryPtr LIBCALL GetBestTopParentForData (Uint2 entityID, BioseqPtr bsp) in GetBestTopParentForData() function
2576 sep = GetBestTopParentForData (entityID, bsp); in PromoteXrefsExEx()
2781 sep = GetBestTopParentForData (entityID, bsp); in PromoteXrefsExEx()
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| H A D | macroapi.c | 24172 parent_sep = GetBestTopParentForData (bsp->idx.entityID, bsp); in SetCdRegionGeneticCode()
24451 ExtraCDSCreationActions (cds, GetBestTopParentForData (bsp->idx.entityID, bsp)); in AdjustProteinSequenceForReadingFrame()
24505 ExtraCDSCreationActions (sfp, GetBestTopParentForData (bsp->idx.entityID, bsp)); in ApplyOneFeatureToBioseq()
29970 && (sep = GetBestTopParentForData (bsp->idx.entityID, bsp)) != NULL in PerformRemoveSequencesInSeqEntryCallback()
36578 sep = GetBestTopParentForData (bsp->idx.entityID, bsp); in AddBioSourcesForBioseq()
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| H A D | sqnutil2.c | 15054 parent = GetBestTopParentForData (entityID, featbsp); in SeqEdTranslateOneCDS()
15814 parent_sep = GetBestTopParentForData (entityID, featbsp); in AddProteinSequenceCopy()
26190 sep = GetBestTopParentForData (entityID, bsp); in GetBioseqGivenSeqLoc()
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| /dports/biology/ncbi-toolkit/ncbi/cn3d/ |
| H A D | cn3dopen.c | 1548 idp->sep = GetBestTopParentForData(entityID, idp->bsp); in Cn3D_ImportSeqEntry()
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| /dports/biology/ncbi-toolkit/ncbi/network/id1arch/ |
| H A D | idfetch.c | 892 sep = GetBestTopParentForData (entityID, bsp); in IdFetch_func()
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| /dports/biology/ncbi-toolkit/ncbi/sequin/ |
| H A D | sequin9.c | 3499 top = GetBestTopParentForData (entityID, udp->oldbsp); in DoFeaturePropWithOffset()
3690 top = GetBestTopParentForData (entityID, oldbsp); in DoFeaturePropThruAlign()
6251 oldsep = GetBestTopParentForData (entityID, udp->oldbsp); in PrepareUpdatePtr()
6253 newsep = GetBestTopParentForData (entityID, udp->newbsp); in PrepareUpdatePtr()
6565 sep = GetBestTopParentForData (entityID, udp->oldbsp); in UpdateOneSequence()
11806 top = GetBestTopParentForData (entityID, upp->orig_bsp); in ImportFeaturesWithOffset()
11975 top = GetBestTopParentForData (entityID, upp->orig_bsp); in ImportFeaturesViaAlignment()
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| H A D | sequin4.c | 455 sep = GetBestTopParentForData (segseq->idx.entityID, segseq); in MoveUpIdenticalSegSetDescriptors()
5446 nucprot_sep = GetBestTopParentForData (nucbsp->idx.entityID, nucbsp); in ExplodeGroup()
13386 top_sep = GetBestTopParentForData (seg_bsp->idx.entityID, seg_bsp); in AddNucOrNucProtSetToList()
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| H A D | sequin6.c | 5076 parent_sep = GetBestTopParentForData (entityID, featbsp); in SqnAddProteinSequenceCopy()
5777 parent_sep = GetBestTopParentForData (entityID, sep->data.ptrvalue); in Apply_AddCDS()
9640 tmp = GetBestTopParentForData (entityID, bsp); in DoOneParse()
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| H A D | sequin3.c | 3730 sep = GetBestTopParentForData (gcp->entityID, bsp); in MergeSegSeqCallback()
7138 topsep = GetBestTopParentForData (entityID, sep->data.ptrvalue); in MakeCDS()
9712 sep = GetBestTopParentForData (bsp->idx.entityID, bsp); in RemoveUnverifiedCallback()
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| H A D | sequin5.c | 24308 sep = GetBestTopParentForData (sfp->idx.entityID, BioseqFindFromSeqLoc (sfp->location)); in GetSeqEntryListForItem()
24328 sep = GetBestTopParentForData (bsp->idx.entityID, bsp); in GetSeqEntryListForItem()
24342 sep = GetBestTopParentForData (ovp->idx.entityID, ovp->idx.parentptr); in GetSeqEntryListForItem()
24350 sep = GetBestTopParentForData (bsp->idx.entityID, bsp); in GetSeqEntryListForItem()
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| H A D | sequin2.c | 8505 nsep = GetBestTopParentForData (ObjMgrGetEntityIDForPointer (bsp), bsp); in FindGeneticCodeForBioseq()
8604 nsep = GetBestTopParentForData (ObjMgrGetEntityIDForPointer (nbsp), nbsp); in AssignProteinsToSelectedNucleotides()
29372 sep = GetBestTopParentForData (rp->input_entityID, bsp); in RemoveBioseq()
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| H A D | sequin7.c | 3382 sep = GetBestTopParentForData (entityID, bsp); in FindInFlatFile()
3764 sep = GetBestTopParentForData (ffp->input_entityID, bsp); in FindByLabelOrPosProc()
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