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Searched refs:Uint4Ptr (Results 1 – 25 of 64) sorted by relevance

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/dports/biology/ncbi-toolkit/ncbi/tools/
H A Dncbisam.h181 Uint4 field_mask, Uint4Ptr PNTR uid,
260 Uint4Ptr Data,
261 Uint4Ptr Index
275 Uint4Ptr Keys,
276 Uint4Ptr Data,
277 Uint4Ptr index
286 Uint4Ptr index);
303 Uint4Ptr Key,
304 Uint4Ptr Data
320 Uint4Ptr Keys,
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H A Dncbisam.c983 Uint4Ptr KeyInfo, KeySamples; in ISAMMakeNumericIndex()
1612 Uint4Ptr Data, in NISAMSearch()
1613 Uint4Ptr Index in NISAMSearch()
1623 Uint4Ptr KeySamples; in NISAMSearch()
1854 Uint4Ptr data; in ISAMDecompressCA()
1910 Uint4Ptr fields; in ISAMDecompressFA()
1957 Uint4Ptr field, uid; in ISAMSearchTerm()
2139 Uint4Ptr SamplePos; in SISAMFindAllData()
2283 Uint4Ptr SamplePos; in SISAMSearch()
2462 Uint4Ptr Key, in NISAMFindKey()
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H A Dreaddb.h995 Uint4Ptr list; /* array of OID's */
996 Uint4Ptr memory; /* memory to keep the OID's (element list).
1142 Uint4Ptr header_index, sequence_index, ambchar_index;
1143 Uint4Ptr header_index_start, sequence_index_start, ambchar_index_start;
1390 readdb_get_header PROTO((ReadDBFILEPtr rdfp, Int4 sequence_number, Uint4Ptr header_index , SeqIdPtr…
1401 Uint4Ptr header_index, SeqIdPtr PNTR id,
1408 Boolean LIBCALL readdb_get_ambchar PROTO((ReadDBFILEPtr rdfp, Int4 sequence_number, Uint4Ptr PNTR …
1730 Uint4Ptr AmbCharPtr; /* ambiguity characters while
1818 Uint4Ptr AmbCharPtr,
H A Dncbisami.h156 Uint4Ptr KeySamples; /* Pointer to first sample offset
H A Dreaddb.c3752 rdfp->header_index = (Uint4Ptr) rdfp->indexfp->mmp; in readdb_new_internalEx()
3984 oidlist->list = (Uint4Ptr) mmfile->mmp_begin + 1; in ReadOIDList()
5721 Uint4Ptr ambchar = NULL; in readdb_get_bioseq_ex()
6263 Uint4Ptr ambchar; in readdb_get_ambchar()
9285 const Uint4Ptr ambiguities) in FDBCreateNewVolume()
9604 Uint4Ptr AmbCharPtr = NULL; in FDBAddSequence()
9729 Uint4Ptr AmbCharPtr, in FDBAddSequence2()
9926 Uint4Ptr AmbCharPtr = NULL; in process_sep()
12463 Uint4 gi1 = *(Uint4Ptr) v1; in compare_gis()
12464 Uint4 gi2 = *(Uint4Ptr) v2; in compare_gis()
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/dports/biology/ncbi-toolkit/ncbi/demo/
H A Dsetsts.c156 Uint4Ptr int_ptr, tmp_ptr; in CheckHashTable()
165 int_ptr = (Uint4Ptr) MMAddress; in CheckHashTable()
185 tmp_ptr = (Uint4Ptr)(RealAddress(int_ptr[7733])); in CheckHashTable()
198 tmp_ptr = (Uint4Ptr)(RealAddress(sts->next)); in CheckHashTable()
/dports/biology/ncbi-toolkit/ncbi/biostruc/
H A DmmdbFF.c67 static Uint4Ptr pU4Pdbidx = NULL;
105 Uint4Ptr pU4Pdb; in LoadMMDBIdx()
124 pU4Pdbidx = (Uint4Ptr) MemNew((size_t) ((iMMDBSize)*sizeof(Uint4))); in LoadMMDBIdx()
169 register Uint4Ptr pU4Pdb = NULL; in MMDBEvalPDB()
H A Dmmdblocl.c141 static Uint4Ptr pU4Pdbidx = NULL;
176 Uint4Ptr pU4Pdb; in LoadMMDBIdx()
209 pU4Pdbidx = (Uint4Ptr) MemNew((size_t) ((iMMDBSize)*sizeof(Uint4))); in LoadMMDBIdx()
292 register Uint4Ptr pU4Pdb = NULL; in MMDBEvalPDB_fb()
H A Dcorematx.h88 Uint4Ptr LIBCALL UI4Vector (Int4 nl, Int4 nh);
95 void LIBCALL UI4VectorFree (Uint4Ptr v, Int4 nl);
138 Uint4Ptr lvector (Int4 nl, Int4 nh);
145 void free_lvector (Uint4Ptr v, Int4 nl, Int4 nh);
H A Dcorematx.c210 Uint4Ptr LIBCALL UI4Vector(Int4 nl, Int4 nh) in UI4Vector()
212 Uint4Ptr v = NULL; in UI4Vector()
213 v=(Uint4Ptr)MemNew((size_t)((nh-nl+1+NR_END)*sizeof(Uint4))); in UI4Vector()
220 return (Uint4Ptr)(v-nl+NR_END); in UI4Vector()
402 void LIBCALL UI4VectorFree(Uint4Ptr v, Int4 nl) in UI4VectorFree()
644 Uint4Ptr lvector(Int4 nl, Int4 nh) in lvector()
679 void free_lvector(Uint4Ptr v, Int4 nl, Int4 nh) in free_lvector()
/dports/biology/ncbi-toolkit/ncbi/api/
H A Dalignmgr.h337 Uint4Ptr aligncoords;
365 Uint4Ptr which_saps;
366 Uint4Ptr num_in_sap;
387 Uint4Ptr aligncoords;
745 NLM_EXTERN Uint4 binary_search_on_uint4_list(Uint4Ptr list, Uint4 pos, Uint4 listlen);
941 NLM_EXTERN Boolean AlnMgrMergeIntoMSMultByMaster(AMAlignIndexPtr amaip, Int4Ptr lens, Uint4Ptr nums…
943 …nPtr PNTR saparray, Int4Ptr starts, Int4 numseg, Int4Ptr lens, Int4 numsaps, Uint4Ptr aligncoords);
945 NLM_EXTERN Uint4 AlnMgrGetMasterGapStartForSeg(SeqAlignPtr sap, Int4 which_gap, Uint4Ptr aligncoord…
946 NLM_EXTERN Boolean AlnMgrReconcileGaps(Int4Ptr lens, Uint4Ptr aligncoords, Int4 num);
H A Dsequtil.h255 Uint4Ptr PNTR lbytes);
257 Uint4Ptr PNTR lbytes);
260 Uint4Ptr PNTR lbytes);
285 Uint4Ptr PNTR lbytes);
292 Uint4Ptr PNTR lbytes,
307 Uint4Ptr PNTR lbytes);
308 NLM_EXTERN Boolean RebuildDNA_4na (Uint1Ptr buffer, Int4 length, Uint4Ptr lbytes);
320 NLM_EXTERN ByteStorePtr BSRebuildDNA_4na (ByteStorePtr from, Uint4Ptr lbytes);
H A Dseqport.h154 Uint4Ptr lbytes; /* Ambiguity information */
281 NLM_EXTERN Uint4Ptr LIBCALL MapNa2ByteToIUPACString PROTO((Uint1Ptr bytep, Uint4Ptr buf, Int4 total…
285 NLM_EXTERN Uint4Ptr LIBCALL MapNa2ByteTo4BitString PROTO((Uint1Ptr bytep, Uint4Ptr buf, Int4 total)…
H A Dudvseq.h269 Uint4Ptr val2);
270 NLM_EXTERN void UDV_BigDecodeIdxFeat (Uint8 index_g, Uint4Ptr val1, Uint2Ptr val2,
H A Dsalsa.h266 Uint4Ptr item_id; /* array of itemID / line */
270 Uint4Ptr alignline; /* array of alignment line index*/
H A Dalignmgr.c6700 rsp_head->which_saps = (Uint4Ptr)MemNew(numblocks*sizeof(Uint4)); in AlnMgrJaggedIndex()
6701 rsp_head->num_in_sap = (Uint4Ptr)MemNew(numblocks*sizeof(Uint4)); in AlnMgrJaggedIndex()
7956 rsp->which_saps = (Uint4Ptr)MemNew(sizeof(Uint4)); in AlnMgrGetRowsForMasterSlave()
7957 rsp->num_in_sap = (Uint4Ptr)MemNew(sizeof(Uint4)); in AlnMgrGetRowsForMasterSlave()
8254 amaip->aligncoords = (Uint4Ptr)MemNew((c+1)*sizeof(Uint4)); in AlnMgrMakeSegmentedMasterSlave()
8268 rsp->which_saps = (Uint4Ptr)MemNew(c*sizeof(Uint4)); in AlnMgrMakeSegmentedMasterSlave()
8269 rsp->num_in_sap = (Uint4Ptr)MemNew(c*sizeof(Uint4)); in AlnMgrMakeSegmentedMasterSlave()
8287 rsp->which_saps = (Uint4Ptr)MemNew(c*sizeof(Uint4)); in AlnMgrMakeSegmentedMasterSlave()
8288 rsp->num_in_sap = (Uint4Ptr)MemNew(c*sizeof(Uint4)); in AlnMgrMakeSegmentedMasterSlave()
8479 rsp->which_saps = (Uint4Ptr)MemNew(c*sizeof(Uint4)); in AlnMgrMakeSegmentedMasterSlave()
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H A Dalignmgr2.h190 Uint4Ptr aligncoords;
196 Uint4Ptr unaln;
/dports/biology/ncbi-toolkit/ncbi/corelib/
H A Dncbiwin.h135 #undef Uint4Ptr
H A Dncbistd.h187 #define Uint4Ptr Nlm_Uint4Ptr macro
H A Dmatrix.c158 Uint4Ptr indx, in lu_back_subst()
364 Nlm_Uint4Ptr indx = (Uint4Ptr)Nlm_MemNew(sizeof(Nlm_Uint4) * mat->n_row); in Nlm_MatrixSolve()
/dports/biology/ncbi-toolkit/ncbi/desktop/
H A Dingengraph.h348 extern void Ing_BigDecodeIdxFeat (Uint8 index_g, Uint4Ptr val1, Uint4Ptr val2);
H A Dudviewer.h352 Uint4Ptr pClr; /*Color table for Features*/
584 NLM_EXTERN Uint4Ptr UDV_BuildFeatColorTable(void);
605 ParaGPtr pgp,RecT PNTR rc,Uint4Ptr pClr,
H A Dapparam.h94 extern Boolean APArchiveUint4 (Boolean writep, APSectPtr sp, CharPtr key, Uint4Ptr pu4);
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/ctools/ctransition/
H A Dncbistd.hpp188 #define Uint4Ptr Nlm_Uint4Ptr macro
/dports/biology/ncbi-toolkit/ncbi/ddv/
H A Dddvcreate.h257 NLM_EXTERN Uint4Ptr DDV_BuildBspEntitiesTbl(ValNodePtr PNTR TableHead,Int4 nBsp);

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