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Searched refs:VRNA_CONSTRAINT_DB_ANG_BRACK (Results 1 – 16 of 16) sorted by relevance

/dports/biology/viennarna/ViennaRNA-2.4.18/src/ViennaRNA/constraints/
H A Dhard.h152 #define VRNA_CONSTRAINT_DB_ANG_BRACK 524288U macro
230 | VRNA_CONSTRAINT_DB_ANG_BRACK \
H A Dhard.c122 | VRNA_CONSTRAINT_DB_ANG_BRACK in vrna_message_constraint_options_all()
140 if (option & VRNA_CONSTRAINT_DB_ANG_BRACK) in vrna_message_constraint_options()
1609 if (options & VRNA_CONSTRAINT_DB_ANG_BRACK) { in apply_DB_constraint()
1642 if (options & VRNA_CONSTRAINT_DB_ANG_BRACK) { in apply_DB_constraint()
/dports/biology/viennarna/ViennaRNA-2.4.18/interfaces/
H A Dconstraints_hard.i63 %constant unsigned int CONSTRAINT_DB_ANG_BRACK = VRNA_CONSTRAINT_DB_ANG_BRACK;
/dports/biology/viennarna/ViennaRNA-2.4.18/src/bin/
H A DRNAsubopt.c275 VRNA_CONSTRAINT_DB_DOT | VRNA_CONSTRAINT_DB_X | VRNA_CONSTRAINT_DB_ANG_BRACK | in main()
561 VRNA_CONSTRAINT_DB_DOT | VRNA_CONSTRAINT_DB_X | VRNA_CONSTRAINT_DB_ANG_BRACK | in main()
H A DRNAcofold.c545 VRNA_CONSTRAINT_DB_DOT | VRNA_CONSTRAINT_DB_X | VRNA_CONSTRAINT_DB_ANG_BRACK | in process_input()
625 VRNA_CONSTRAINT_DB_DOT | VRNA_CONSTRAINT_DB_X | VRNA_CONSTRAINT_DB_ANG_BRACK | in process_input()
H A DRNAup.c394 vrna_message_constraint_options(VRNA_CONSTRAINT_NO_HEADER | VRNA_CONSTRAINT_DB_ANG_BRACK); in main()
/dports/biology/viennarna/ViennaRNA-2.4.18/src/ViennaRNA/
H A Dalipfold.c148 | VRNA_CONSTRAINT_DB_ANG_BRACK in wrap_alipf_fold()
H A Dpart_func_co.c205 | VRNA_CONSTRAINT_DB_ANG_BRACK in wrap_co_pf_fold()
H A Dpf_fold.c149 | VRNA_CONSTRAINT_DB_ANG_BRACK in wrap_pf_fold()
H A Dfold.c203 | VRNA_CONSTRAINT_DB_ANG_BRACK in wrap_fold()
H A Dperturbation_fold.c178 | VRNA_CONSTRAINT_DB_ANG_BRACK in pairing_probabilities_from_restricted_pf()
H A Dcofold.c1156 | VRNA_CONSTRAINT_DB_ANG_BRACK in wrap_cofold()
H A Dsubopt.c2420 | VRNA_CONSTRAINT_DB_ANG_BRACK in wrap_subopt()
/dports/biology/viennarna/ViennaRNA-2.4.18/interfaces/Perl/
H A DRNA_wrap.cpp85090 …unsigned_SS_int SWIG_PERL_CALL_ARGS_1(static_cast< unsigned int >(VRNA_CONSTRAINT_DB_ANG_BRACK))); in XS()
/dports/biology/viennarna/ViennaRNA-2.4.18/interfaces/Python/
H A DRNA_wrap.cpp78806 …B_ANG_BRACK",SWIG_From_unsigned_SS_int(static_cast< unsigned int >(VRNA_CONSTRAINT_DB_ANG_BRACK))); in SWIG_init()
/dports/biology/viennarna/ViennaRNA-2.4.18/interfaces/Python3/
H A DRNA_wrap.cpp79400 …B_ANG_BRACK",SWIG_From_unsigned_SS_int(static_cast< unsigned int >(VRNA_CONSTRAINT_DB_ANG_BRACK))); in SWIG_init()