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/dports/biology/py-pysam/pysam-0.18.0/pysam/
H A Dlibcbcf.c4971 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5pysam_7libcbcf_bcf_str_cache_get_charptr()
5242 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5pysam_7libcbcf_comb()
5290 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5pysam_7libcbcf_bcf_geno_combinations()
5353 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5pysam_7libcbcf_check_header_id()
5399 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5pysam_7libcbcf_is_gt_fmt()
5650 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5pysam_7libcbcf_bcf_genotype_count()
5764 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_gb_5pysam_7libcbcf_19char_array_to_tuple_2generator28()
5999 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5pysam_7libcbcf_char_array_to_tuple()
6192 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_gb_5pysam_7libcbcf_19bcf_array_to_object_2generator29()
6982 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5pysam_7libcbcf_bcf_array_to_object()
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H A Dlibcfaidx.c2624 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5pysam_9libcfaidx_makeFastqProxy()
2768 __Pyx_TraceReturn(Py_None, 0); in __pyx_pf_5pysam_9libcfaidx_9FastaFile___cinit__()
2835 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_9libcfaidx_9FastaFile_2is_open()
2929 __Pyx_TraceReturn(Py_None, 0); in __pyx_pf_5pysam_9libcfaidx_9FastaFile_4__len__()
3792 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_9libcfaidx_9FastaFile_6_open()
3883 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_9libcfaidx_9FastaFile_8close()
3967 __Pyx_TraceReturn(Py_None, 0); in __pyx_pf_5pysam_9libcfaidx_9FastaFile_10__dealloc__()
4029 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_9libcfaidx_9FastaFile_12__enter__()
4186 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_9libcfaidx_9FastaFile_14__exit__()
4276 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_9libcfaidx_9FastaFile_6closed___get__()
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H A Dlibcalignedsegment.c4928 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_gb_5pysam_18libcalignedsegment_2generator()
5091 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_gb_5pysam_18libcalignedsegment_5generator1()
5149 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5pysam_18libcalignedsegment_c_mul()
5236 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5pysam_18libcalignedsegment_tolower()
5323 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5pysam_18libcalignedsegment_toupper()
5463 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5pysam_18libcalignedsegment_strand_mark_char()
5581 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5pysam_18libcalignedsegment_pileup_base_qual_skip()
5667 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5pysam_18libcalignedsegment_map_typecode_htslib_to_python()
5753 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5pysam_18libcalignedsegment_map_typecode_python_to_htslib()
5867 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5pysam_18libcalignedsegment_update_bin()
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H A Dlibchtslib.c2750 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5pysam_10libchtslib_set_verbosity()
2806 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_10libchtslib_set_verbosity()
2860 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5pysam_10libchtslib_get_verbosity()
2903 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_10libchtslib_2get_verbosity()
3038 __Pyx_TraceReturn(Py_None, 0); in __pyx_pf_5pysam_10libchtslib_5HFile___init__()
3116 __Pyx_TraceReturn(Py_None, 0); in __pyx_pf_5pysam_10libchtslib_5HFile_2__dealloc__()
3181 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_10libchtslib_5HFile_6closed___get__()
3410 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5pysam_10libchtslib_5HFile__open()
3565 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_10libchtslib_5HFile_4close()
3702 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_10libchtslib_5HFile_6fileno()
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H A Dlibctabix.c3527 __Pyx_TraceReturn(Py_None, 0); in __pyx_pf_5pysam_9libctabix_6Parser___init__()
3593 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_9libctabix_6Parser_2set_encoding()
3656 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_9libctabix_6Parser_4get_encoding()
3723 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5pysam_9libctabix_6Parser_parse()
3840 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_9libctabix_6Parser_6__call__()
4078 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_9libctabix_6Parser_8__reduce_cython__()
4141 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_9libctabix_6Parser_10__setstate_cython__()
4217 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5pysam_9libctabix_7asTuple_parse()
4455 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_9libctabix_7asTuple___reduce_cython__()
4518 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_9libctabix_7asTuple_2__setstate_cython__()
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H A Dlibcalignmentfile.c4499 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_17libcalignmentfile_build_header_line()
4606 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5pysam_17libcalignmentfile_makeAlignmentHeader()
4731 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_17libcalignmentfile_2read_failure_reason()
4763 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5pysam_17libcalignmentfile_fill_AlignmentHeader_from_list()
4826 __Pyx_TraceReturn(Py_None, 0); in __pyx_pf_5pysam_17libcalignmentfile_15AlignmentHeader___cinit__()
4924 __Pyx_TraceReturn(Py_None, 0); in __pyx_pf_5pysam_17libcalignmentfile_15AlignmentHeader_2__init__()
5704 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_17libcalignmentfile_15AlignmentHeader_4_from_text_and_lengths()
6213 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_17libcalignmentfile_15AlignmentHeader_6from_text()
7351 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_17libcalignmentfile_15AlignmentHeader_8from_dict()
7814 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_17libcalignmentfile_15AlignmentHeader_10from_references()
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H A Dlibcsamfile.c2609 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_11libcsamfile_7Samfile___reduce_cython__()
2670 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_11libcsamfile_7Samfile_2__setstate_cython__()
2730 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_11libcsamfile_11AlignedRead___reduce_cython__()
2791 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5pysam_11libcsamfile_11AlignedRead_2__setstate_cython__()
3041 __Pyx_TraceReturn(Py_None, 0); in __pyx_pf_7cpython_5array_5array___getbuffer__()
3096 __Pyx_TraceReturn(Py_None, 0); in __pyx_pf_7cpython_5array_5array_2__releasebuffer__()
3200 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_7cpython_5array_clone()
3274 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_7cpython_5array_copy()
3360 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_7cpython_5array_extend_buffer()
3437 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_7cpython_5array_extend()
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/dports/lang/cython/Cython-0.29.24/Cython/Utility/
H A DProfile.c143 #define __Pyx_TraceReturn(result, nogil) \ macro
163 #define __Pyx_TraceReturn(result, nogil) \ macro
182 #define __Pyx_TraceReturn(result, nogil) macro
/dports/lang/cython/Cython-0.29.24/build/lib.dragonfly-6.3-DEVELOPMENT-x86_64-3.8/Cython/Utility/
H A DProfile.c143 #define __Pyx_TraceReturn(result, nogil) \ macro
163 #define __Pyx_TraceReturn(result, nogil) \ macro
182 #define __Pyx_TraceReturn(result, nogil) macro
/dports/lang/cython/stage/usr/local/lib/python3.8/site-packages/Cython/Utility/
H A DProfile.c143 #define __Pyx_TraceReturn(result, nogil) \ macro
163 #define __Pyx_TraceReturn(result, nogil) \ macro
182 #define __Pyx_TraceReturn(result, nogil) macro
/dports/lang/cython-devel/cython-2b1e743/Cython/Utility/
H A DProfile.c164 #define __Pyx_TraceReturn(result, nogil) \ macro
184 #define __Pyx_TraceReturn(result, nogil) \ macro
203 #define __Pyx_TraceReturn(result, nogil) macro
/dports/science/py-pymatgen/pymatgen-2022.0.15/pymatgen/optimization/
H A Dneighbors.c3043 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_12optimization_9neighbors_safe_malloc()
3180 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_12optimization_9neighbors_safe_realloc()
6100 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_12optimization_9neighbors_find_points_in_spheres()
6198 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_12optimization_9neighbors_distance2()
6799 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_12optimization_9neighbors_get_cube_neighbors()
6973 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_12optimization_9neighbors_get_bounds()
7068 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_12optimization_9neighbors_get_frac_coords()
7199 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_12optimization_9neighbors_matmul()
7334 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_12optimization_9neighbors_matrix_inv()
7463 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_12optimization_9neighbors_matrix_det()
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/dports/math/py-CyLP/CyLP-0.91.4/cylp/cy/
H A DCyClpSimplex.cpp4278 __Pyx_TraceReturn(Py_None, 0);
4333 __Pyx_TraceReturn(Py_None, 0);
4389 __Pyx_TraceReturn(__pyx_r, 0);
4535 __Pyx_TraceReturn(__pyx_r, 0);
4671 __Pyx_TraceReturn(__pyx_r, 0);
5000 __Pyx_TraceReturn(__pyx_r, 0);
5344 __Pyx_TraceReturn(__pyx_r, 0);
5568 __Pyx_TraceReturn(Py_None, 0);
5632 __Pyx_TraceReturn(__pyx_r, 0);
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H A DCyClpPrimalColumnPivotBase.cpp2686 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_4cylp_2cy_26CyClpPrimalColumnPivotBase_RunPivotColumn()
2729 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_4cylp_2cy_26CyClpPrimalColumnPivotBase_RunClone()
2770 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_4cylp_2cy_26CyClpPrimalColumnPivotBase_RunSaveWeights()
2838 __Pyx_TraceReturn(Py_None, 0); in __pyx_pf_4cylp_2cy_26CyClpPrimalColumnPivotBase_26CyClpPrimalColumnPivotBase___init__()
2899 __Pyx_TraceReturn(Py_None, 0); in __pyx_pf_4cylp_2cy_26CyClpPrimalColumnPivotBase_26CyClpPrimalColumnPivotBase_2__dealloc__()
2946 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_4cylp_2cy_26CyClpPrimalColumnPivotBase_26CyClpPrimalColumnPivotBase_pivotColumn()
2999 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_4cylp_2cy_26CyClpPrimalColumnPivotBase_26CyClpPrimalColumnPivotBase_clone()
3044 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_4cylp_2cy_26CyClpPrimalColumnPivotBase_26CyClpPrimalColumnPivotBase_saveWeights()
3086 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_4cylp_2cy_26CyClpPrimalColumnPivotBase_26CyClpPrimalColumnPivotBase_model()
3127 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_4cylp_2cy_26CyClpPrimalColumnPivotBase_26CyClpPrimalColumnPivotBase_setModel()
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H A DCyClpDualRowPivotBase.cpp2772 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_4cylp_2cy_21CyClpDualRowPivotBase_RunPivotRow()
2815 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_4cylp_2cy_21CyClpDualRowPivotBase_RunDualPivotClone()
2858 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_4cylp_2cy_21CyClpDualRowPivotBase_RunUpdateWeights()
2926 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_4cylp_2cy_21CyClpDualRowPivotBase_RunUpdatePrimalSolution()
2985 __Pyx_TraceReturn(Py_None, 0); in __pyx_pf_4cylp_2cy_21CyClpDualRowPivotBase_21CyClpDualRowPivotBase___init__()
3033 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_4cylp_2cy_21CyClpDualRowPivotBase_21CyClpDualRowPivotBase_pivotRow()
3086 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_4cylp_2cy_21CyClpDualRowPivotBase_21CyClpDualRowPivotBase_clone()
3133 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_4cylp_2cy_21CyClpDualRowPivotBase_21CyClpDualRowPivotBase_updateWeights()
3189 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_4cylp_2cy_21CyClpDualRowPivotBase_21CyClpDualRowPivotBase_updatePrimalSolution()
3231 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_4cylp_2cy_21CyClpDualRowPivotBase_21CyClpDualRowPivotBase_model()
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/dports/biology/py-macs2/MACS-2.2.7.1/MACS2/IO/
H A DPairedEndTrack.c2989 __Pyx_TraceReturn(Py_None, 0); in __pyx_pf_5MACS2_2IO_14PairedEndTrack_8PETrackI___init__()
3354 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_2IO_14PairedEndTrack_8PETrackI_add_loc()
3457 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_2IO_14PairedEndTrack_8PETrackI_2add_loc()
3831 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_2IO_14PairedEndTrack_8PETrackI_destroy()
3870 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_2IO_14PairedEndTrack_8PETrackI_4destroy()
3989 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_2IO_14PairedEndTrack_8PETrackI___expand__()
4032 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_2IO_14PairedEndTrack_8PETrackI_6__expand__()
4312 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_2IO_14PairedEndTrack_8PETrackI_set_rlengths()
4357 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_2IO_14PairedEndTrack_8PETrackI_8set_rlengths()
4542 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_2IO_14PairedEndTrack_8PETrackI_get_rlengths()
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H A DParser.c3527 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_2IO_6Parser_guess_parser()
3624 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_2IO_6Parser_guess_parser()
3971 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_2IO_6Parser___fw_binary_parse_le()
4331 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_2IO_6Parser___fw_binary_parse_be()
4617 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_2IO_6Parser___pe_binary_parse_le()
4889 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_2IO_6Parser___pe_binary_parse_be()
5019 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_2IO_6Parser_17StrandFormatError___init__()
5131 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_2IO_6Parser_17StrandFormatError_2__str__()
5600 __Pyx_TraceReturn(Py_None, 0); in __pyx_pf_5MACS2_2IO_6Parser_13GenericParser___init__()
5641 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_2IO_6Parser_13GenericParser___skip_first_commentlines()
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H A DFixWidthTrack.c3099 __Pyx_TraceReturn(Py_None, 0); in __pyx_pf_5MACS2_2IO_13FixWidthTrack_7FWTrack___init__()
3631 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_2IO_13FixWidthTrack_7FWTrack_destroy()
3670 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_2IO_13FixWidthTrack_7FWTrack_2destroy()
4074 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_2IO_13FixWidthTrack_7FWTrack_add_loc()
4177 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_2IO_13FixWidthTrack_7FWTrack_4add_loc()
4271 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_2IO_13FixWidthTrack_7FWTrack___expand__()
4644 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_2IO_13FixWidthTrack_7FWTrack_finalize()
4683 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_2IO_13FixWidthTrack_7FWTrack_6finalize()
4963 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_2IO_13FixWidthTrack_7FWTrack_set_rlengths()
5008 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_2IO_13FixWidthTrack_7FWTrack_8set_rlengths()
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H A DScoreTrack.c3316 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_2IO_10ScoreTrack_int_max()
3349 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_2IO_10ScoreTrack_int_min()
3626 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_2IO_10ScoreTrack_get_pscore()
3869 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_2IO_10ScoreTrack_logLR_asym()
4112 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_2IO_10ScoreTrack_logLR_sym()
4159 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_2IO_10ScoreTrack_get_logFE()
4202 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_2IO_10ScoreTrack_get_subtraction()
4280 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_2IO_10ScoreTrack_16CombinedTwoTrack___init__()
4501 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_2IO_10ScoreTrack_16CombinedTwoTrack_2add_chromosome()
4737 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_2IO_10ScoreTrack_16CombinedTwoTrack_4add()
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/dports/biology/py-macs2/MACS-2.2.7.1/MACS2/
H A DProb.c2301 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_4Prob_pnorm()
2400 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_4Prob_pnorm()
2519 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_4Prob_factorial()
2569 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_4Prob_2factorial()
2820 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_4Prob_poz()
2895 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_4Prob_ex20()
3216 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_4Prob_chisq_pvalue_e()
3304 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_4Prob_4chisq_pvalue_e()
3643 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_4Prob_chisq_logp_e()
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H A DStatistics.c1704 __Pyx_TraceReturn(Py_None, 0); in __pyx_pf_5MACS2_10Statistics_18P_Score_Upper_Tail___init__()
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2112 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_10Statistics_18P_Score_Upper_Tail_2get_pscore()
2346 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_10Statistics_18P_Score_Upper_Tail_4__reduce_cython__()
2405 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_10Statistics_18P_Score_Upper_Tail_6__setstate_cython__()
2473 __Pyx_TraceReturn(Py_None, 0); in __pyx_pf_5MACS2_10Statistics_10LogLR_Asym___init__()
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2876 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_10Statistics_10LogLR_Asym_2get_logLR_asym()
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H A DPeakModel.c3016 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_9PeakModel_median()
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3164 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_9PeakModel_23NotEnoughPairsException___init__()
3234 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_9PeakModel_23NotEnoughPairsException_2__str__()
3519 __Pyx_TraceReturn(Py_None, 0); in __pyx_pf_5MACS2_9PeakModel_9PeakModel___init__()
4089 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_9PeakModel_9PeakModel_build()
4129 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_9PeakModel_9PeakModel_2build()
4265 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_9PeakModel_9PeakModel_4__str__()
5611 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_9PeakModel_9PeakModel___paired_peak_model()
6088 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_9PeakModel_9PeakModel___model_add_line()
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H A DPileup.c2580 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_6Pileup_clean_up_ndarray()
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3410 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_6Pileup_pileup_and_write()
3877 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_6Pileup_pileup_and_write_pe()
4007 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_6Pileup_2pileup_and_write_pe()
4441 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_6Pileup_unified_pileup_bdg()
4619 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_6Pileup_4unified_pileup_bdg()
5234 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_6Pileup_pileup_bdg_se()
6057 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_6Pileup_pileup_w_multiple_d_bdg()
6432 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_6Pileup_pileup_bdg_pe()
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H A DSignal.c2607 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_6Signal_maxima()
2730 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_6Signal_maxima()
3155 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_6Signal_internal_minima()
3229 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_5MACS2_6Signal_sqrt()
4090 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_6Signal_enforce_peakyness()
4217 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_pf_5MACS2_6Signal_2enforce_peakyness()
4354 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_6Signal_is_valid_peak()
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4687 __Pyx_TraceReturn(__pyx_r, 0); in __pyx_f_5MACS2_6Signal_hard_clip()
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3757 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_11cpp_process_CreateNormalizedLevenshteinFunctionTable()
3825 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_11cpp_process_CreateLevenshteinFunctionTable()
3956 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_11cpp_process_JaroWinklerKwargsInit()
4024 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_11cpp_process_CreateJaroWinklerSimilarityFunctionTable()
4315 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_11cpp_process_IsIntegratedScorer()
4390 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_11cpp_process_IsIntegratedDistance()
4993 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_11cpp_process_CachedScorerInit()
5115 __Pyx_TraceReturn(Py_None, 0); in __pyx_f_11cpp_process_CachedDistanceInit()
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