Searched refs:aaRevMatDir (Results 1 – 6 of 6) sorted by relevance
| /dports/biology/mrbayes/MrBayes-3.2.7/src/ |
| H A D | bayes.c | 700 defaultModel.aaRevMatDir[i] = 1.0; in InitializeMrBayes()
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| H A D | bayes.h | 1012 MrBFlt aaRevMatDir[190]; member
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| H A D | model.c | 4817 modelParams[i].aaRevMatDir[j] = 1.0; in DoPrsetParm()
4903 modelParams[i].aaRevMatDir[j] = tempStateFreqs[j]; in DoPrsetParm()
4908 … if (AreDoublesEqual(modelParams[i].aaRevMatDir[0], modelParams[i].aaRevMatDir[j], 0.00001) == NO) in DoPrsetParm()
4912 … modelParams[i].aaRevMatDir[0], modelParams[i].aaRevMatDir[0]); in DoPrsetParm()
4920 MrBayesPrint ("%1.2lf", modelParams[i].aaRevMatDir[j]); in DoPrsetParm()
4933 … if (AreDoublesEqual(modelParams[i].aaRevMatDir[0], modelParams[i].aaRevMatDir[j], 0.00001) == NO) in DoPrsetParm()
4937 … spacer, modelParams[i].aaRevMatDir[0], modelParams[i].aaRevMatDir[0], i+1); in DoPrsetParm()
13302 …if (AreDoublesEqual (modelParams[part1].aaRevMatDir[i], modelParams[part2].aaRevMatDir[i], (MrBFlt… in IsModelSame()
22502 … if (AreDoublesEqual(modelParams[i].aaRevMatDir[0], modelParams[i].aaRevMatDir[j], 0.00001) == NO) in ShowModel()
22507 … spacer, modelParams[i].aaRevMatDir[0], modelParams[i].aaRevMatDir[0]); in ShowModel()
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| H A D | command.c | 11375 if (AreDoublesEqual (mp->aaRevMatDir[0], mp->aaRevMatDir[j], 0.00001) == NO) in GetUserHelp()
11378 MrBayesPrint ("(%1.1lf,%1.1lf,...)\n", mp->aaRevMatDir[0], mp->aaRevMatDir[0]); in GetUserHelp()
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| H A D | proposal.c | 14085 alphaDir = mp->aaRevMatDir; in Move_Revmat_Dir()
14335 priorAlpha = mp->aaRevMatDir; in Move_Revmat_Slider()
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| H A D | mcmc.c | 7703 alphaDir = mp->aaRevMatDir; in LogPrior()
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