/dports/biology/bcftools/bcftools-1.14/plugins/ |
H A D | tag2tag.c | 171 n = bcf_get_format_float(in_hdr,rec,"GP",&farr,&mfarr); in process() 202 n = bcf_get_format_float(in_hdr,rec,"GL",&farr,&mfarr); in process() 224 n = bcf_get_format_float(in_hdr,rec,"GP",&farr,&mfarr); in process()
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H A D | guess-ploidy.c | 290 int ngl = bcf_get_format_float(args->hdr,rec,"GL",&args->farr,&args->nfarr); in process_region_guess()
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/dports/biology/bio-mocha/bcftools-1.14/plugins/ |
H A D | tag2tag.c | 171 n = bcf_get_format_float(in_hdr,rec,"GP",&farr,&mfarr); in process() 202 n = bcf_get_format_float(in_hdr,rec,"GL",&farr,&mfarr); in process() 224 n = bcf_get_format_float(in_hdr,rec,"GP",&farr,&mfarr); in process()
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H A D | score.c | 671 number = bcf_get_format_float(hdr, line, "DS", &float_arr, &m_float); in run() 699 number = bcf_get_format_float(hdr, line, "HDS", &float_arr, &m_float); in run() 713 number = bcf_get_format_float(hdr, line, ap_str[ap], &float_arr, &m_float); in run() 742 number = bcf_get_format_float(hdr, line, "GP", &float_arr, &m_float); in run()
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H A D | guess-ploidy.c | 290 int ngl = bcf_get_format_float(args->hdr,rec,"GL",&args->farr,&args->nfarr); in process_region_guess()
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/dports/biology/vt/vt-0.57721/ |
H A D | decompose2.cpp | 233 ret = bcf_get_format_float(odr->hdr, v, "GL", &gl, &n); in decompose2() 696 … int32_t ret = bcf_get_format_float(odr->hdr, v, tag, &g, &n); in decompose2() 761 … int32_t ret = bcf_get_format_float(odr->hdr, v, tag, &a, &n); in decompose2() 830 … int32_t ret = bcf_get_format_float(odr->hdr, v, tag, &a, &n); in decompose2()
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H A D | decompose.cpp | 263 ret = bcf_get_format_float(odr->hdr, v, "GL", &gl, &n); in decompose() 734 … int32_t ret = bcf_get_format_float(odr->hdr, v, tag, &g, &n); in decompose() 799 … int32_t ret = bcf_get_format_float(odr->hdr, v, tag, &a, &n); in decompose() 868 … int32_t ret = bcf_get_format_float(odr->hdr, v, tag, &a, &n); in decompose()
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H A D | paste.cpp | 281 … int32_t b = bcf_get_format_float(odrs[j]->hdr, vs[j], genotype_field, &p, &np); in paste()
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H A D | merge_genotypes.cpp | 565 int32_t no_cg = bcf_get_format_float(h, v, "CG", &CG, &no_CG); in merge_genotypes()
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H A D | profile_mendelian.cpp | 496 int k = bcf_get_format_float(h, v, "CG", &cgs, &n_cg); in profile_mendelian()
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/dports/biology/vt/vt-0.57721/lib/htslib/test/ |
H A D | test-vcf-api.c | 357 int ret = bcf_get_format_float(hdr, line, "TF", &values, &count); in check_format_values()
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/dports/biology/kallisto/kallisto-0.46.1/ext/htslib/test/ |
H A D | test-vcf-api.c | 356 int ret = bcf_get_format_float(hdr, line, "TF", &values, &count); in check_format_values()
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/dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/test/ |
H A D | test-vcf-api.c | 446 int ret = bcf_get_format_float(hdr, line, "TF", &values, &count); in check_format_values()
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/dports/biology/htslib/htslib-1.14/test/ |
H A D | test-vcf-api.c | 505 int ret = bcf_get_format_float(hdr, line, "TF", &values, &count); in check_format_values()
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/dports/biology/vt/vt-0.57721/lib/htslib/htslib/ |
H A D | vcf.h | 725 …#define bcf_get_format_float(hdr,line,tag,dst,ndst) bcf_get_format_values(hdr,line,tag,(void**)(d… macro
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/dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/htslib/ |
H A D | vcf.h | 725 …#define bcf_get_format_float(hdr,line,tag,dst,ndst) bcf_get_format_values(hdr,line,tag,(void**)(d… macro
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/dports/biology/stacks/stacks-2.4/htslib/htslib/ |
H A D | vcf.h | 725 …#define bcf_get_format_float(hdr,line,tag,dst,ndst) bcf_get_format_values(hdr,line,tag,(void**)(d… macro
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/dports/biology/kallisto/kallisto-0.46.1/ext/htslib/htslib/ |
H A D | vcf.h | 725 …#define bcf_get_format_float(hdr,line,tag,dst,ndst) bcf_get_format_values(hdr,line,tag,(void**)(d… macro
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/dports/biology/bcftools/bcftools-1.14/ |
H A D | polysomy.c | 209 if ( bcf_get_format_float(hdr,line,"BAF",&baf,&nbaf) != 1 ) continue; in init_data()
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H A D | vcfannotate.c | 1457 … int i, j, ndst = bcf_get_format_float(args->hdr,line,col->hdr_key_dst,&args->tmpf2,&args->mtmpf2); in core_setter_format_real() 1787 …int nsrc = bcf_get_format_float(args->files->readers[1].header,rec,col->hdr_key_src,&args->tmpf,&a… in vcf_setter_format_real() 1810 int ndst = bcf_get_format_float(args->hdr,line,col->hdr_key_dst,&args->tmpf2,&args->mtmpf2); in vcf_setter_format_real()
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/dports/biology/bio-mocha/bcftools-1.14/ |
H A D | polysomy.c | 209 if ( bcf_get_format_float(hdr,line,"BAF",&baf,&nbaf) != 1 ) continue; in init_data()
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H A D | vcfannotate.c | 1457 … int i, j, ndst = bcf_get_format_float(args->hdr,line,col->hdr_key_dst,&args->tmpf2,&args->mtmpf2); in core_setter_format_real() 1787 …int nsrc = bcf_get_format_float(args->files->readers[1].header,rec,col->hdr_key_src,&args->tmpf,&a… in vcf_setter_format_real() 1810 int ndst = bcf_get_format_float(args->hdr,line,col->hdr_key_dst,&args->tmpf2,&args->mtmpf2); in vcf_setter_format_real()
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/dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/htslib/ |
H A D | vcf.h | 1048 …#define bcf_get_format_float(hdr,line,tag,dst,ndst) bcf_get_format_values(hdr,line,tag,(void**)(d… macro
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/dports/biology/py-pysam/pysam-0.18.0/htslib/htslib/ |
H A D | vcf.h | 1049 …#define bcf_get_format_float(hdr,line,tag,dst,ndst) bcf_get_format_values(hdr,line,tag,(void**)(d… macro
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/dports/biology/htslib/htslib-1.14/htslib/ |
H A D | vcf.h | 1049 …#define bcf_get_format_float(hdr,line,tag,dst,ndst) bcf_get_format_values(hdr,line,tag,(void**)(d… macro
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