Searched refs:clockRatePr (Results 1 – 4 of 4) sorted by relevance
/dports/biology/mrbayes/MrBayes-3.2.7/src/ |
H A D | bayes.c | 811 …strcpy(defaultModel.clockRatePr, "Fixed"); /* prior on base subst. rate for clock trees … in InitializeMrBayes()
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H A D | bayes.h | 1109 char clockRatePr[100]; /* prior on base substitution rate of tree for clock trees */ member
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H A D | model.c | 8118 strcpy(modelParams[i].clockRatePr, tempStr); in DoPrsetParm() 12932 || strcmp (mp->clockRatePr, "Fixed") != 0 in InitializeChainTrees() 12933 || (strcmp (mp->clockRatePr, "Fixed") == 0 in InitializeChainTrees() 19880 if (!strcmp(mp->clockRatePr,"Normal")) in SetModelParams() 19887 else if (!strcmp(mp->clockRatePr,"Lognormal")) in SetModelParams() 19894 else if (!strcmp(mp->clockRatePr,"Exponential")) in SetModelParams() 19901 else if (!strcmp(mp->clockRatePr,"Gamma")) in SetModelParams() 23848 if (!strcmp(mp->clockRatePr,"Normal")) in ShowParameters() 23850 else if (!strcmp(mp->clockRatePr,"Lognormal")) in ShowParameters() 23852 else if (!strcmp(mp->clockRatePr,"Gamma")) in ShowParameters() [all …]
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H A D | command.c | 11616 MrBayesPrint (" Clockratepr Fixed/Normal/Lognormal/ %s", mp->clockRatePr); in GetUserHelp() 11617 if (!strcmp(mp->clockRatePr, "Fixed")) in GetUserHelp() 11619 else if (!strcmp(mp->clockRatePr,"Exponential")) in GetUserHelp() 11621 else if (!strcmp(mp->clockRatePr,"Normal")) in GetUserHelp() 11623 else if (!strcmp(mp->clockRatePr,"Lognormal")) in GetUserHelp() 11627 assert (!strcmp(mp->clockRatePr,"Gamma")); in GetUserHelp()
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