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Searched refs:clockRatePr (Results 1 – 4 of 4) sorted by relevance

/dports/biology/mrbayes/MrBayes-3.2.7/src/
H A Dbayes.c811 …strcpy(defaultModel.clockRatePr, "Fixed"); /* prior on base subst. rate for clock trees … in InitializeMrBayes()
H A Dbayes.h1109 char clockRatePr[100]; /* prior on base substitution rate of tree for clock trees */ member
H A Dmodel.c8118 strcpy(modelParams[i].clockRatePr, tempStr); in DoPrsetParm()
12932 || strcmp (mp->clockRatePr, "Fixed") != 0 in InitializeChainTrees()
12933 || (strcmp (mp->clockRatePr, "Fixed") == 0 in InitializeChainTrees()
19880 if (!strcmp(mp->clockRatePr,"Normal")) in SetModelParams()
19887 else if (!strcmp(mp->clockRatePr,"Lognormal")) in SetModelParams()
19894 else if (!strcmp(mp->clockRatePr,"Exponential")) in SetModelParams()
19901 else if (!strcmp(mp->clockRatePr,"Gamma")) in SetModelParams()
23848 if (!strcmp(mp->clockRatePr,"Normal")) in ShowParameters()
23850 else if (!strcmp(mp->clockRatePr,"Lognormal")) in ShowParameters()
23852 else if (!strcmp(mp->clockRatePr,"Gamma")) in ShowParameters()
[all …]
H A Dcommand.c11616 MrBayesPrint (" Clockratepr Fixed/Normal/Lognormal/ %s", mp->clockRatePr); in GetUserHelp()
11617 if (!strcmp(mp->clockRatePr, "Fixed")) in GetUserHelp()
11619 else if (!strcmp(mp->clockRatePr,"Exponential")) in GetUserHelp()
11621 else if (!strcmp(mp->clockRatePr,"Normal")) in GetUserHelp()
11623 else if (!strcmp(mp->clockRatePr,"Lognormal")) in GetUserHelp()
11627 assert (!strcmp(mp->clockRatePr,"Gamma")); in GetUserHelp()