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Searched refs:codonCatDir (Results 1 – 5 of 5) sorted by relevance

/dports/biology/mrbayes/MrBayes-3.2.7/src/
H A Dbayes.c737 defaultModel.codonCatDir[0] = 1.0; in InitializeMrBayes()
738 defaultModel.codonCatDir[1] = 1.0; in InitializeMrBayes()
739 defaultModel.codonCatDir[2] = 1.0; in InitializeMrBayes()
H A Dmodel.c5518 ….2lf,%1.2lf)\n", spacer, modelParams[i].codonCatDir[0], modelParams[i].codonCatDir[1], modelParams… in DoPrsetParm()
13363 …if (AreDoublesEqual (modelParams[part1].codonCatDir[0], modelParams[part2].codonCatDir[0], (MrBFlt… in IsModelSame()
13365 …if (AreDoublesEqual (modelParams[part1].codonCatDir[1], modelParams[part2].codonCatDir[1], (MrBFlt… in IsModelSame()
13367 …if (AreDoublesEqual (modelParams[part1].codonCatDir[2], modelParams[part2].codonCatDir[2], (MrBFlt… in IsModelSame()
13386 …if (AreDoublesEqual (modelParams[part1].codonCatDir[0], modelParams[part2].codonCatDir[0], (MrBFlt… in IsModelSame()
13388 …if (AreDoublesEqual (modelParams[part1].codonCatDir[1], modelParams[part2].codonCatDir[1], (MrBFlt… in IsModelSame()
13438 …if (AreDoublesEqual (modelParams[part1].codonCatDir[0], modelParams[part2].codonCatDir[0], (MrBFlt… in IsModelSame()
13440 …if (AreDoublesEqual (modelParams[part1].codonCatDir[1], modelParams[part2].codonCatDir[1], (MrBFlt… in IsModelSame()
13442 …if (AreDoublesEqual (modelParams[part1].codonCatDir[2], modelParams[part2].codonCatDir[2], (MrBFlt… in IsModelSame()
23384 …%1.2lf) on pi(-), pi(N), and pi(+)\n", spacer, mp->codonCatDir[0], mp->codonCatDir[1], mp->codonCa… in ShowParameters()
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H A Dbayes.h1035 MrBFlt codonCatDir[3]; member
H A Dcommand.c11421 …MrBayesPrint ("(%1.1lf,%1.1lf,%1.1lf)\n", mp->codonCatDir[0], mp->codonCatDir[1], mp->codonCatDir[… in GetUserHelp()
H A Dmcmc.c7767 alphaDir = mp->codonCatDir; in LogPrior()