Searched refs:esl_rsq_XShuffle (Results 1 – 13 of 13) sorted by relevance
/dports/biology/infernal/infernal-1.1.3/easel/ |
H A D | esl_randomseq.h | 49 extern int esl_rsq_XShuffle (ESL_RANDOMNESS *r, const ESL_DSQ *dsq, int L, ESL_DSQ *sh…
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H A D | esl_randomseq.tex | 56 \hyperlink{func:esl_rsq_XShuffle()}{\ccode{esl\_rsq\_XShuffle()}} & Shuffle a digital sequence.\\
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H A D | esl_randomseq.c | 907 esl_rsq_XShuffle(ESL_RANDOMNESS *r, const ESL_DSQ *dsq, int L, ESL_DSQ *shuffled) in esl_rsq_XShuffle() function 1419 else esl_rsq_XShuffle(r, dsq1, L, dsq2); in main() 1797 if (esl_rsq_XShuffle(r, dsq, L, ds2) != eslOK) esl_fatal(logmsg); in utest_XShufflers() 1804 if (esl_rsq_XShuffle(r, ds2, L, ds2) != eslOK) esl_fatal(logmsg); in utest_XShufflers()
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H A D | esl_msashuffle.c | 227 esl_rsq_XShuffle(rng, csq, nres, csq); in esl_msashuffle_VShuffle()
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/dports/biology/hmmer/hmmer-3.3/easel/ |
H A D | esl_randomseq.h | 49 extern int esl_rsq_XShuffle (ESL_RANDOMNESS *r, const ESL_DSQ *dsq, int L, ESL_DSQ *sh…
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H A D | esl_randomseq.tex | 56 \hyperlink{func:esl_rsq_XShuffle()}{\ccode{esl\_rsq\_XShuffle()}} & Shuffle a digital sequence.\\
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H A D | esl_randomseq.c | 907 esl_rsq_XShuffle(ESL_RANDOMNESS *r, const ESL_DSQ *dsq, int L, ESL_DSQ *shuffled) in esl_rsq_XShuffle() function 1419 else esl_rsq_XShuffle(r, dsq1, L, dsq2); in main() 1797 if (esl_rsq_XShuffle(r, dsq, L, ds2) != eslOK) esl_fatal(logmsg); in utest_XShufflers() 1804 if (esl_rsq_XShuffle(r, ds2, L, ds2) != eslOK) esl_fatal(logmsg); in utest_XShufflers()
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H A D | esl_msashuffle.c | 227 esl_rsq_XShuffle(rng, csq, nres, csq); in esl_msashuffle_VShuffle()
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/dports/biology/infernal/infernal-1.1.3/hmmer/profmark/ |
H A D | create-profmark.c | 661 …if (esl_opt_GetBoolean(go, "--mono")) status = esl_rsq_XShuffle (cfg->r, sq->dsq, L, sq->… in set_random_segment() 663 …if (L < minDPL) status = esl_rsq_XShuffle (cfg->r, sq->dsq, L, sq->ds… in set_random_segment()
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/dports/biology/hmmer/hmmer-3.3/profmark/ |
H A D | create-profmark.c | 661 …if (esl_opt_GetBoolean(go, "--mono")) status = esl_rsq_XShuffle (cfg->r, sq->dsq, L, sq->… in set_random_segment() 663 …if (L < minDPL) status = esl_rsq_XShuffle (cfg->r, sq->dsq, L, sq->ds… in set_random_segment()
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/dports/biology/infernal/infernal-1.1.3/rmark/ |
H A D | rmark-create.c | 1314 …if (L < minDPL) status = esl_rsq_XShuffle (cfg->r, sq->dsq, L, sq->ds… in set_random_segment() 1317 …else if (esl_opt_GetBoolean(go, "--mono")) status = esl_rsq_XShuffle (cfg->r, sq->dsq, L, sq->… in set_random_segment()
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/dports/biology/hmmer/hmmer-3.3/easel/documentation/ |
H A D | codestyle.md | 254 | `X` | `esl_rsq_XShuffle()` | `ESL_DSQ` type, an Easel digitized sequence |
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/dports/biology/infernal/infernal-1.1.3/easel/documentation/ |
H A D | codestyle.md | 254 | `X` | `esl_rsq_XShuffle()` | `ESL_DSQ` type, an Easel digitized sequence |
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