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Searched refs:esl_rsq_XShuffle (Results 1 – 13 of 13) sorted by relevance

/dports/biology/infernal/infernal-1.1.3/easel/
H A Desl_randomseq.h49 extern int esl_rsq_XShuffle (ESL_RANDOMNESS *r, const ESL_DSQ *dsq, int L, ESL_DSQ *sh…
H A Desl_randomseq.tex56 \hyperlink{func:esl_rsq_XShuffle()}{\ccode{esl\_rsq\_XShuffle()}} & Shuffle a digital sequence.\\
H A Desl_randomseq.c907 esl_rsq_XShuffle(ESL_RANDOMNESS *r, const ESL_DSQ *dsq, int L, ESL_DSQ *shuffled) in esl_rsq_XShuffle() function
1419 else esl_rsq_XShuffle(r, dsq1, L, dsq2); in main()
1797 if (esl_rsq_XShuffle(r, dsq, L, ds2) != eslOK) esl_fatal(logmsg); in utest_XShufflers()
1804 if (esl_rsq_XShuffle(r, ds2, L, ds2) != eslOK) esl_fatal(logmsg); in utest_XShufflers()
H A Desl_msashuffle.c227 esl_rsq_XShuffle(rng, csq, nres, csq); in esl_msashuffle_VShuffle()
/dports/biology/hmmer/hmmer-3.3/easel/
H A Desl_randomseq.h49 extern int esl_rsq_XShuffle (ESL_RANDOMNESS *r, const ESL_DSQ *dsq, int L, ESL_DSQ *sh…
H A Desl_randomseq.tex56 \hyperlink{func:esl_rsq_XShuffle()}{\ccode{esl\_rsq\_XShuffle()}} & Shuffle a digital sequence.\\
H A Desl_randomseq.c907 esl_rsq_XShuffle(ESL_RANDOMNESS *r, const ESL_DSQ *dsq, int L, ESL_DSQ *shuffled) in esl_rsq_XShuffle() function
1419 else esl_rsq_XShuffle(r, dsq1, L, dsq2); in main()
1797 if (esl_rsq_XShuffle(r, dsq, L, ds2) != eslOK) esl_fatal(logmsg); in utest_XShufflers()
1804 if (esl_rsq_XShuffle(r, ds2, L, ds2) != eslOK) esl_fatal(logmsg); in utest_XShufflers()
H A Desl_msashuffle.c227 esl_rsq_XShuffle(rng, csq, nres, csq); in esl_msashuffle_VShuffle()
/dports/biology/infernal/infernal-1.1.3/hmmer/profmark/
H A Dcreate-profmark.c661 …if (esl_opt_GetBoolean(go, "--mono")) status = esl_rsq_XShuffle (cfg->r, sq->dsq, L, sq->… in set_random_segment()
663 …if (L < minDPL) status = esl_rsq_XShuffle (cfg->r, sq->dsq, L, sq->ds… in set_random_segment()
/dports/biology/hmmer/hmmer-3.3/profmark/
H A Dcreate-profmark.c661 …if (esl_opt_GetBoolean(go, "--mono")) status = esl_rsq_XShuffle (cfg->r, sq->dsq, L, sq->… in set_random_segment()
663 …if (L < minDPL) status = esl_rsq_XShuffle (cfg->r, sq->dsq, L, sq->ds… in set_random_segment()
/dports/biology/infernal/infernal-1.1.3/rmark/
H A Drmark-create.c1314 …if (L < minDPL) status = esl_rsq_XShuffle (cfg->r, sq->dsq, L, sq->ds… in set_random_segment()
1317 …else if (esl_opt_GetBoolean(go, "--mono")) status = esl_rsq_XShuffle (cfg->r, sq->dsq, L, sq->… in set_random_segment()
/dports/biology/hmmer/hmmer-3.3/easel/documentation/
H A Dcodestyle.md254 | `X` | `esl_rsq_XShuffle()` | `ESL_DSQ` type, an Easel digitized sequence |
/dports/biology/infernal/infernal-1.1.3/easel/documentation/
H A Dcodestyle.md254 | `X` | `esl_rsq_XShuffle()` | `ESL_DSQ` type, an Easel digitized sequence |