Searched refs:k_min_Q_M (Results 1 – 3 of 3) sorted by relevance
673 k_min_Q_M = l_min_Q_M = 0; in pf2D_linear()677 prepareBoundaries(k_min_Q_M, in pf2D_linear()696 matrices->k_min_Q_M[ij], in pf2D_linear()1223 k_min_Q_M = matrices->k_min_Q_M; in pf2D_circ()2900 *k_min_Q_M, *k_max_Q_M, in backtrack_qcM() local2923 k_min_Q_M = matrices->k_min_Q_M; in backtrack_qcM()3294 k_min_Q_M = matrices->k_min_Q_M; in backtrack()3519 for (cnt1 = k_min_Q_M[ii - k + 1]; in backtrack()3585 for (cnt1 = k_min_Q_M[ii - k + 1]; in backtrack()3809 k_min_Q_M = matrices->k_min_Q_M; in backtrack_qm()[all …]
1427 vars->k_min_Q_M = NULL; in pf_matrices_alloc_2Dfold()1476 vars->k_min_Q_M = (int *)vrna_alloc(sizeof(int) * size); in pf_matrices_alloc_2Dfold()1581 for (cnt1 = self->k_min_Q_M[ij]; cnt1 <= self->k_max_Q_M[ij]; cnt1++) in pf_matrices_free_2Dfold()1587 if (self->k_min_Q_M[ij] < INF) { in pf_matrices_free_2Dfold()1588 self->Q_M[ij] += self->k_min_Q_M[ij]; in pf_matrices_free_2Dfold()1590 self->l_min_Q_M[ij] += self->k_min_Q_M[ij]; in pf_matrices_free_2Dfold()1591 self->l_max_Q_M[ij] += self->k_min_Q_M[ij]; in pf_matrices_free_2Dfold()1602 free(self->k_min_Q_M); in pf_matrices_free_2Dfold()
299 int *k_min_Q_M; member