Searched refs:l_max_Q (Results 1 – 3 of 3) sorted by relevance
285 int **l_max_Q; member
415 matrices->l_max_Q[ij] = (int *)vrna_alloc(sizeof(int)); in pf2D_linear()417 matrices->l_max_Q[ij][0] = 0; in pf2D_linear()983 &matrices->l_max_Q[ij] in pf2D_linear()997 matrices->l_max_Q[ij] in pf2D_linear()1042 cnt2 <= matrices->l_max_Q[ij + 1][cnt1]; in pf2D_linear()1139 &matrices->l_max_Q[ij], in pf2D_linear()1152 cnt2 <= matrices->l_max_Q[ij][cnt1]; in pf2D_linear()1901 **l_min_Q, **l_max_Q, in vrna_pbacktrack5_TwoD() local1927 l_max_Q = matrices->l_max_Q; in vrna_pbacktrack5_TwoD()1970 if ((l_min <= d2) && (l_max_Q[ij][d1] >= d2)) in vrna_pbacktrack5_TwoD()[all …]
1412 vars->l_max_Q = NULL; in pf_matrices_alloc_2Dfold()1457 vars->l_max_Q = (int **)vrna_alloc(sizeof(int *) * size); in pf_matrices_alloc_2Dfold()1529 self->l_max_Q[ij] += self->k_min_Q[ij]; in pf_matrices_free_2Dfold()1531 free(self->l_max_Q[ij]); in pf_matrices_free_2Dfold()1539 free(self->l_max_Q); in pf_matrices_free_2Dfold()