/dports/biology/ugene/ugene-40.1/src/plugins_3rdparty/umuscle/src/muscle/ |
H A D | henikoffweightpb.cpp | 67 m_Weights[uSeqIndex] += (WEIGHT) (1.0/uCount); in CalcHenikoffWeightsColPB() 88 m_Weights[uSeqIndex] = w; in SetUniformWeights() 100 m_Weights[0] = 1.0; in SetHenikoffWeightsPB() 105 m_Weights[0] = (WEIGHT) 0.5; in SetHenikoffWeightsPB() 106 m_Weights[1] = (WEIGHT) 0.5; in SetHenikoffWeightsPB() 111 m_Weights[uSeqIndex] = 0.0; in SetHenikoffWeightsPB() 119 m_Weights[uSeqIndex] = 0.0; in SetHenikoffWeightsPB() 123 if (VectorIsZero(m_Weights, uSeqCount)) in SetHenikoffWeightsPB() 124 VectorSet(m_Weights, uSeqCount, 1.0); in SetHenikoffWeightsPB() 126 Normalize(m_Weights, uSeqCount); in SetHenikoffWeightsPB()
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H A D | henikoffweight.cpp | 49 m_Weights[uSeqIndex] += (WEIGHT) (1.0/uDenom); in CalcHenikoffWeightsCol() 62 m_Weights[0] = (WEIGHT) 1.0; in SetHenikoffWeights() 67 m_Weights[0] = (WEIGHT) 0.5; in SetHenikoffWeights() 68 m_Weights[1] = (WEIGHT) 0.5; in SetHenikoffWeights() 73 m_Weights[uSeqIndex] = 0.0; in SetHenikoffWeights() 81 m_Weights[uSeqIndex] = 0.0; in SetHenikoffWeights() 83 Normalize(m_Weights, uSeqCount); in SetHenikoffWeights()
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H A D | msa.cpp | 22 m_Weights = 0; in MSA() 46 delete[] m_Weights; in Free() 55 m_Weights = 0; in Free() 76 m_Weights = new WEIGHT[uSeqCount]; in SetSize() 83 m_Weights[uSeqIndex] = BTInsane; in SetSize() 402 m_Weights[uSeqIndex] = w; in SetSeqWeight() 416 m_Weights[uSeqIndex] *= f; in NormalizeWeights() 522 delete[] m_Weights; in DeleteSeq() 523 m_Weights = 0; in DeleteSeq() 830 delete[] m_Weights; in ExpandCache() [all …]
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/dports/biology/muscle/muscle-3.8.1551/ |
H A D | henikoffweightpb.cpp | 64 m_Weights[uSeqIndex] += (WEIGHT) (1.0/uCount); in CalcHenikoffWeightsColPB() 85 m_Weights[uSeqIndex] = w; in SetUniformWeights() 97 m_Weights[0] = 1.0; in SetHenikoffWeightsPB() 102 m_Weights[0] = (WEIGHT) 0.5; in SetHenikoffWeightsPB() 103 m_Weights[1] = (WEIGHT) 0.5; in SetHenikoffWeightsPB() 108 m_Weights[uSeqIndex] = 0.0; in SetHenikoffWeightsPB() 116 m_Weights[uSeqIndex] = 0.0; in SetHenikoffWeightsPB() 120 if (VectorIsZero(m_Weights, uSeqCount)) in SetHenikoffWeightsPB() 121 VectorSet(m_Weights, uSeqCount, 1.0); in SetHenikoffWeightsPB() 123 Normalize(m_Weights, uSeqCount); in SetHenikoffWeightsPB()
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H A D | henikoffweight.cpp | 49 m_Weights[uSeqIndex] += (WEIGHT) (1.0/uDenom); in CalcHenikoffWeightsCol() 62 m_Weights[0] = (WEIGHT) 1.0; in SetHenikoffWeights() 67 m_Weights[0] = (WEIGHT) 0.5; in SetHenikoffWeights() 68 m_Weights[1] = (WEIGHT) 0.5; in SetHenikoffWeights() 73 m_Weights[uSeqIndex] = 0.0; in SetHenikoffWeights() 81 m_Weights[uSeqIndex] = 0.0; in SetHenikoffWeights() 83 Normalize(m_Weights, uSeqCount); in SetHenikoffWeights()
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H A D | msa.cpp | 18 m_Weights = 0; in MSA() 42 delete[] m_Weights; in Free() 51 m_Weights = 0; in Free() 70 m_Weights = new WEIGHT[uSeqCount]; in SetSize() 77 m_Weights[uSeqIndex] = BTInsane; in SetSize() 363 m_Weights[uSeqIndex] = w; in SetSeqWeight() 377 m_Weights[uSeqIndex] *= f; in NormalizeWeights() 483 delete[] m_Weights; in DeleteSeq() 484 m_Weights = 0; in DeleteSeq() 780 delete[] m_Weights; in ExpandCache() [all …]
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/dports/lang/spidermonkey60/firefox-60.9.0/modules/pdfium/pdfium/core/fxcodec/codec/ |
H A D | fx_codec_progress.cpp | 85 pixel_weights.m_Weights[0] = 65536 - pixel_weights.m_Weights[1]; in Calc() 163 pWeight->m_Weights[0] = 65536; in Calc() 164 pWeight->m_Weights[1] = 0; in Calc() 181 pWeight->m_Weights[0] = in Calc() 186 pWeight->m_Weights[1] = 65536 - pWeight->m_Weights[0]; in Calc() 197 pWeight->m_Weights[0] = 65536; in Calc() 198 pWeight->m_Weights[1] = 0; in Calc() 218 pWeight->m_Weights[1] = 0; in Calc() 236 pWeight->m_Weights[1] = 0; in Calc() 246 pWeight->m_Weights[1] = 0; in Calc() [all …]
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/dports/www/chromium-legacy/chromium-88.0.4324.182/third_party/pdfium/core/fxcodec/ |
H A D | progressive_decoder.cpp | 88 pixel_weights.m_Weights[0] = 65536 - pixel_weights.m_Weights[1]; in Calc() 156 pWeight->m_Weights[1] = 0; in Calc() 173 pWeight->m_Weights[0] = in Calc() 176 pWeight->m_Weights[1] = 65536 - pWeight->m_Weights[0]; in Calc() 187 pWeight->m_Weights[0] = 65536; in Calc() 188 pWeight->m_Weights[1] = 0; in Calc() 207 pWeight->m_Weights[1] = 0; in Calc() 225 pWeight->m_Weights[1] = 0; in Calc() 235 pWeight->m_Weights[1] = 0; in Calc() 241 pWeight->m_Weights[0] = in Calc() [all …]
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/dports/www/qt5-webengine/qtwebengine-everywhere-src-5.15.2/src/3rdparty/chromium/third_party/pdfium/core/fxcodec/ |
H A D | progressivedecoder.cpp | 78 pixel_weights.m_Weights[0] = 65536 - pixel_weights.m_Weights[1]; in Calc() 146 pWeight->m_Weights[1] = 0; in Calc() 163 pWeight->m_Weights[0] = in Calc() 166 pWeight->m_Weights[1] = 65536 - pWeight->m_Weights[0]; in Calc() 177 pWeight->m_Weights[0] = 65536; in Calc() 178 pWeight->m_Weights[1] = 0; in Calc() 197 pWeight->m_Weights[1] = 0; in Calc() 215 pWeight->m_Weights[1] = 0; in Calc() 225 pWeight->m_Weights[1] = 0; in Calc() 231 pWeight->m_Weights[0] = in Calc() [all …]
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/dports/editors/texmaker/texmaker-5.0.3/pdfium/core/fxcodec/codec/ |
H A D | fx_codec_progress.cpp | 83 pixel_weights.m_Weights[0] = 65536 - pixel_weights.m_Weights[1]; in Calc() 161 pWeight->m_Weights[0] = 65536; in Calc() 162 pWeight->m_Weights[1] = 0; in Calc() 179 pWeight->m_Weights[0] = in Calc() 184 pWeight->m_Weights[1] = 65536 - pWeight->m_Weights[0]; in Calc() 195 pWeight->m_Weights[0] = 65536; in Calc() 196 pWeight->m_Weights[1] = 0; in Calc() 216 pWeight->m_Weights[1] = 0; in Calc() 234 pWeight->m_Weights[1] = 0; in Calc() 244 pWeight->m_Weights[1] = 0; in Calc() [all …]
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/dports/science/InsightToolkit/ITK-5.0.1/Modules/Filtering/DistanceMap/include/ |
H A D | itkFastChamferDistanceImageFilter.hxx | 39 m_Weights[--dim] = 1.65849; in FastChamferDistanceImageFilter() 42 m_Weights[--dim] = 1.34065; in FastChamferDistanceImageFilter() 45 m_Weights[--dim] = 0.92644; in FastChamferDistanceImageFilter() 148 if ( center_value > -m_Weights[0] ) in GenerateDataND() 152 val[n] = center_value + m_Weights[n]; in GenerateDataND() 164 if ( center_value < m_Weights[0] ) in GenerateDataND() 168 val[n] = center_value - m_Weights[n]; in GenerateDataND() 237 if ( center_value > -m_Weights[0] ) in GenerateDataND() 241 val[n] = center_value + m_Weights[n]; in GenerateDataND() 254 if ( center_value < m_Weights[0] ) in GenerateDataND() [all …]
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/dports/math/saga/saga-8.1.3/saga-gis/src/tools/terrain_analysis/ta_hydrology/ |
H A D | Flow_AreaDownslope.cpp | 257 m_Weights.Create(m_pTool->Get_System(), SG_DATATYPE_Byte); in On_Execute() 259 m_pTool->Set_Parameter("WEIGHTS" , &m_Weights); in On_Execute() 280 m_Weights.Destroy(); in On_Execute_Finish() 300 m_Weights.Assign(0.); in On_Execute_Position() 301 m_Weights.Set_Value(Get_xGrid(), Get_yGrid(), 1.); in On_Execute_Position() 305 m_Weights.Set_Value(Get_xGrid(), Get_yGrid(), 1.); in On_Execute_Position() 309 m_Weights.Set_Value(Get_xGrid(), Get_yGrid(), 1.); in On_Execute_Position()
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H A D | Flow_AreaDownslope.h | 92 CSG_Grid m_Weights;
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/dports/editors/texmaker/texmaker-5.0.3/pdfium/core/fxge/dib/ |
H A D | fx_dib_engine.cpp | 79 pixel_weights.m_Weights[0] = 65536; in Calc() 84 pixel_weights.m_Weights[0] = 65536 - pixel_weights.m_Weights[1]; in Calc() 109 pixel_weights.m_Weights[0] = in Calc() 122 pixel_weights.m_Weights[1] = in Calc() 128 pixel_weights.m_Weights[0] = in Calc() 134 pixel_weights.m_Weights[0] = in Calc() 136 pixel_weights.m_Weights[1] = in Calc() 149 pixel_weights.m_Weights[0] = in Calc() 159 pixel_weights.m_Weights[2] = in Calc() 179 pixel_weights.m_Weights[0] = 65536; in Calc() [all …]
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/dports/science/InsightToolkit/ITK-5.0.1/Modules/Numerics/Statistics/include/ |
H A D | itkMixtureModelComponentBase.hxx | 65 os << m_Weights << std::endl; in PrintSelf() 77 m_Weights = WeightArrayType( m_Sample->Size() ); in SetSample() 145 if ( index < m_Weights.size() ) in SetWeight() 147 ( m_Weights )[index] = value; in SetWeight() 160 if ( index < m_Weights.Size() ) in GetWeight() 162 return m_Weights[index]; in GetWeight()
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/dports/science/InsightToolkit/ITK-5.0.1/Modules/Numerics/Optimizersv4/include/ |
H A D | itkObjectToObjectOptimizerBase.hxx | 68 if( this->m_Weights.Size() > 0 ) in PrintSelf() 70 os << indent << "m_Weights: " << this->m_Weights << std::endl; in PrintSelf() 172 if( this->m_Weights.Size() > 0 ) in StartOptimization() 174 if( this->m_Weights.Size() != this->m_Metric->GetNumberOfLocalParameters() ) in StartOptimization() 176 itkExceptionMacro("Size of weights (" << this->m_Weights.Size() in StartOptimization() 182 for( SizeType i=0; i < this->m_Weights.Size(); i++ ) in StartOptimization() 184 … SValueType difference = std::fabs( NumericTraits<SValueType>::OneValue() - this->m_Weights[i] ); in StartOptimization()
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/dports/www/qt5-webengine/qtwebengine-everywhere-src-5.15.2/src/3rdparty/chromium/third_party/pdfium/core/fxge/dib/ |
H A D | cstretchengine.cpp | 72 pixel_weights.m_Weights[0] = 65536; in Calc() 74 pixel_weights.m_Weights[1] = in Calc() 78 pixel_weights.m_Weights[0] = 65536 - pixel_weights.m_Weights[1]; in Calc() 98 pixel_weights.m_Weights[0] = in Calc() 111 pixel_weights.m_Weights[1] = in Calc() 117 pixel_weights.m_Weights[0] = in Calc() 123 pixel_weights.m_Weights[0] = in Calc() 125 pixel_weights.m_Weights[1] = in Calc() 138 pixel_weights.m_Weights[0] = in Calc() 148 pixel_weights.m_Weights[2] = in Calc() [all …]
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/dports/lang/spidermonkey60/firefox-60.9.0/modules/pdfium/pdfium/core/fxge/dib/ |
H A D | fx_dib_engine.cpp | 89 pixel_weights.m_Weights[0] = 65536; in Calc() 91 pixel_weights.m_Weights[1] = FXSYS_round( in Calc() 94 pixel_weights.m_Weights[0] = 65536 - pixel_weights.m_Weights[1]; in Calc() 119 pixel_weights.m_Weights[0] = in Calc() 132 pixel_weights.m_Weights[1] = in Calc() 138 pixel_weights.m_Weights[0] = in Calc() 144 pixel_weights.m_Weights[0] = in Calc() 146 pixel_weights.m_Weights[1] = in Calc() 159 pixel_weights.m_Weights[0] = in Calc() 169 pixel_weights.m_Weights[2] = in Calc() [all …]
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/dports/science/InsightToolkit/ITK-5.0.1/Modules/Segmentation/LevelSets/include/ |
H A D | itkShapePriorMAPCostFunction.hxx | 37 m_Weights.Fill(1.0); in ShapePriorMAPCostFunction() 52 os << indent << "Weights: " << m_Weights << std::endl; in PrintSelf() 96 MeasureType output = counter * m_Weights[0]; in ComputeLogInsideTerm() 117 measure *= m_Weights[2]; in ComputeLogShapePriorTerm() 154 sum *= m_Weights[1]; in ComputeLogGradientTerm()
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/dports/math/saga/saga-8.1.3/saga-gis/src/tools/terrain_analysis/ta_morphometry/ |
H A D | param_scale.cpp | 474 …if( (m_Radius = Parameters("SIZE")->asInt()) < 1 || !m_Weights.Create(1 + 2 * m_Radius, 1 + 2 * m_… in Get_Weights() 482 for(int y=0; y<m_Weights.Get_NY(); y++) in Get_Weights() 484 for(int x=0; x<m_Weights.Get_NX(); x++) in Get_Weights() 486 m_Weights[y][x] = 1.0 / pow(1.0 + SG_Get_Length(m_Radius - x, m_Radius - y), Exponent); in Get_Weights() 506 for(int y=0; y<m_Weights.Get_NY(); y++) in Get_Normal() 510 for(int x=0; x<m_Weights.Get_NX(); x++) in Get_Normal() 512 double dw = m_Weights[y][x]; in Get_Normal() 594 …for(iy=0, jy=y-m_Radius, dy=-m_Radius*Get_Cellsize(); iy<m_Weights.Get_NY(); iy++, jy++, dy+=Get_C… in Get_Observed() 596 …for(ix=0, jx=x-m_Radius, dx=-m_Radius*Get_Cellsize(); ix<m_Weights.Get_NX(); ix++, jx++, dx+=Get_C… in Get_Observed() 602 dz *= m_Weights[iy][ix]; in Get_Observed()
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H A D | Curvature_UpDownSlope.cpp | 140 if( !m_Weights.Create(Get_System()) ) in On_Execute() 189 m_Weights.Destroy(); in On_Execute() 226 if( (Weights = m_Weights.asDouble(x, y)) > 0.0 ) in Get_Upslope() 254 m_Weights .Add_Value(ix, iy, Proportion[i]); in Get_Upslope()
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H A D | Curvature_UpDownSlope.h | 100 CSG_Grid *m_pDEM, *m_pC_Local, *m_pC_Up, *m_pC_Up_Local, *m_pC_Down, *m_pC_Down_Local, m_Weights; variable
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/dports/math/saga/saga-8.1.3/saga-gis/src/tools/grid/grid_tools/ |
H A D | Grid_Merge.cpp | 307 double w = m_Weights.asDouble(x, y); in On_Execute() 319 m_Weights.Destroy(); in On_Execute() 418 …if( !m_Weights.Create(m_pMosaic->Get_System(), m_pGrids->Get_Grid_Count() < 256 ? SG_DATATYPE_Byte… in Initialize() 428 if( !m_Weights.Create(m_pMosaic->Get_System(), SG_DATATYPE_Word) ) in Initialize() 435 m_Weights.Set_Scaling(m_pMosaic->Get_Cellsize()); in Initialize() 561 m_Weights .Set_Value(x, y, 1); in Set_Value() 566 m_Weights .Add_Value(x, y, 1); in Set_Value() 585 m_Weights .Set_Value(x, y, Weight); in Set_Value() 589 double d = (Weight - m_Weights.asDouble(x, y)) / m_dBlend; in Set_Value() 594 m_Weights .Set_Value(x, y, Weight); in Set_Value() [all …]
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/dports/www/chromium-legacy/chromium-88.0.4324.182/third_party/pdfium/core/fxge/dib/ |
H A D | cstretchengine.cpp | 71 pixel_weights.m_Weights[0] = 65536; in Calc() 73 pixel_weights.m_Weights[1] = in Calc() 77 pixel_weights.m_Weights[0] = 65536 - pixel_weights.m_Weights[1]; in Calc() 83 pixel_weights.m_Weights[0] = 65536; in Calc() 121 pixel_weights.m_Weights[idx] = FXSYS_roundf(weight * 65536); in Calc() 140 return idx < GetPixelWeightSize() ? &pWeight->m_Weights[idx] : nullptr; in GetValueFromPixelWeight()
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/dports/science/iboview/ibo-view.20150427/src/Common/ |
H A D | CxDiis.cpp | 186 m_Weights.resize( nMaxDim() ); in PerformDiis() 240 m_Weights[iUsedVecs[iThis]] = W1; in PerformDiis() 271 B(i, nDim) = -m_Weights[iUsedVecs[i]]; in PerformDiis() 272 B(nDim, i) = -m_Weights[iUsedVecs[i]]; in PerformDiis()
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