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Searched refs:m_Weights (Results 1 – 25 of 48) sorted by relevance

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/dports/biology/ugene/ugene-40.1/src/plugins_3rdparty/umuscle/src/muscle/
H A Dhenikoffweightpb.cpp67 m_Weights[uSeqIndex] += (WEIGHT) (1.0/uCount); in CalcHenikoffWeightsColPB()
88 m_Weights[uSeqIndex] = w; in SetUniformWeights()
100 m_Weights[0] = 1.0; in SetHenikoffWeightsPB()
105 m_Weights[0] = (WEIGHT) 0.5; in SetHenikoffWeightsPB()
106 m_Weights[1] = (WEIGHT) 0.5; in SetHenikoffWeightsPB()
111 m_Weights[uSeqIndex] = 0.0; in SetHenikoffWeightsPB()
119 m_Weights[uSeqIndex] = 0.0; in SetHenikoffWeightsPB()
123 if (VectorIsZero(m_Weights, uSeqCount)) in SetHenikoffWeightsPB()
124 VectorSet(m_Weights, uSeqCount, 1.0); in SetHenikoffWeightsPB()
126 Normalize(m_Weights, uSeqCount); in SetHenikoffWeightsPB()
H A Dhenikoffweight.cpp49 m_Weights[uSeqIndex] += (WEIGHT) (1.0/uDenom); in CalcHenikoffWeightsCol()
62 m_Weights[0] = (WEIGHT) 1.0; in SetHenikoffWeights()
67 m_Weights[0] = (WEIGHT) 0.5; in SetHenikoffWeights()
68 m_Weights[1] = (WEIGHT) 0.5; in SetHenikoffWeights()
73 m_Weights[uSeqIndex] = 0.0; in SetHenikoffWeights()
81 m_Weights[uSeqIndex] = 0.0; in SetHenikoffWeights()
83 Normalize(m_Weights, uSeqCount); in SetHenikoffWeights()
H A Dmsa.cpp22 m_Weights = 0; in MSA()
46 delete[] m_Weights; in Free()
55 m_Weights = 0; in Free()
76 m_Weights = new WEIGHT[uSeqCount]; in SetSize()
83 m_Weights[uSeqIndex] = BTInsane; in SetSize()
402 m_Weights[uSeqIndex] = w; in SetSeqWeight()
416 m_Weights[uSeqIndex] *= f; in NormalizeWeights()
522 delete[] m_Weights; in DeleteSeq()
523 m_Weights = 0; in DeleteSeq()
830 delete[] m_Weights; in ExpandCache()
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/dports/biology/muscle/muscle-3.8.1551/
H A Dhenikoffweightpb.cpp64 m_Weights[uSeqIndex] += (WEIGHT) (1.0/uCount); in CalcHenikoffWeightsColPB()
85 m_Weights[uSeqIndex] = w; in SetUniformWeights()
97 m_Weights[0] = 1.0; in SetHenikoffWeightsPB()
102 m_Weights[0] = (WEIGHT) 0.5; in SetHenikoffWeightsPB()
103 m_Weights[1] = (WEIGHT) 0.5; in SetHenikoffWeightsPB()
108 m_Weights[uSeqIndex] = 0.0; in SetHenikoffWeightsPB()
116 m_Weights[uSeqIndex] = 0.0; in SetHenikoffWeightsPB()
120 if (VectorIsZero(m_Weights, uSeqCount)) in SetHenikoffWeightsPB()
121 VectorSet(m_Weights, uSeqCount, 1.0); in SetHenikoffWeightsPB()
123 Normalize(m_Weights, uSeqCount); in SetHenikoffWeightsPB()
H A Dhenikoffweight.cpp49 m_Weights[uSeqIndex] += (WEIGHT) (1.0/uDenom); in CalcHenikoffWeightsCol()
62 m_Weights[0] = (WEIGHT) 1.0; in SetHenikoffWeights()
67 m_Weights[0] = (WEIGHT) 0.5; in SetHenikoffWeights()
68 m_Weights[1] = (WEIGHT) 0.5; in SetHenikoffWeights()
73 m_Weights[uSeqIndex] = 0.0; in SetHenikoffWeights()
81 m_Weights[uSeqIndex] = 0.0; in SetHenikoffWeights()
83 Normalize(m_Weights, uSeqCount); in SetHenikoffWeights()
H A Dmsa.cpp18 m_Weights = 0; in MSA()
42 delete[] m_Weights; in Free()
51 m_Weights = 0; in Free()
70 m_Weights = new WEIGHT[uSeqCount]; in SetSize()
77 m_Weights[uSeqIndex] = BTInsane; in SetSize()
363 m_Weights[uSeqIndex] = w; in SetSeqWeight()
377 m_Weights[uSeqIndex] *= f; in NormalizeWeights()
483 delete[] m_Weights; in DeleteSeq()
484 m_Weights = 0; in DeleteSeq()
780 delete[] m_Weights; in ExpandCache()
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/dports/lang/spidermonkey60/firefox-60.9.0/modules/pdfium/pdfium/core/fxcodec/codec/
H A Dfx_codec_progress.cpp85 pixel_weights.m_Weights[0] = 65536 - pixel_weights.m_Weights[1]; in Calc()
163 pWeight->m_Weights[0] = 65536; in Calc()
164 pWeight->m_Weights[1] = 0; in Calc()
181 pWeight->m_Weights[0] = in Calc()
186 pWeight->m_Weights[1] = 65536 - pWeight->m_Weights[0]; in Calc()
197 pWeight->m_Weights[0] = 65536; in Calc()
198 pWeight->m_Weights[1] = 0; in Calc()
218 pWeight->m_Weights[1] = 0; in Calc()
236 pWeight->m_Weights[1] = 0; in Calc()
246 pWeight->m_Weights[1] = 0; in Calc()
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/dports/www/chromium-legacy/chromium-88.0.4324.182/third_party/pdfium/core/fxcodec/
H A Dprogressive_decoder.cpp88 pixel_weights.m_Weights[0] = 65536 - pixel_weights.m_Weights[1]; in Calc()
156 pWeight->m_Weights[1] = 0; in Calc()
173 pWeight->m_Weights[0] = in Calc()
176 pWeight->m_Weights[1] = 65536 - pWeight->m_Weights[0]; in Calc()
187 pWeight->m_Weights[0] = 65536; in Calc()
188 pWeight->m_Weights[1] = 0; in Calc()
207 pWeight->m_Weights[1] = 0; in Calc()
225 pWeight->m_Weights[1] = 0; in Calc()
235 pWeight->m_Weights[1] = 0; in Calc()
241 pWeight->m_Weights[0] = in Calc()
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/dports/www/qt5-webengine/qtwebengine-everywhere-src-5.15.2/src/3rdparty/chromium/third_party/pdfium/core/fxcodec/
H A Dprogressivedecoder.cpp78 pixel_weights.m_Weights[0] = 65536 - pixel_weights.m_Weights[1]; in Calc()
146 pWeight->m_Weights[1] = 0; in Calc()
163 pWeight->m_Weights[0] = in Calc()
166 pWeight->m_Weights[1] = 65536 - pWeight->m_Weights[0]; in Calc()
177 pWeight->m_Weights[0] = 65536; in Calc()
178 pWeight->m_Weights[1] = 0; in Calc()
197 pWeight->m_Weights[1] = 0; in Calc()
215 pWeight->m_Weights[1] = 0; in Calc()
225 pWeight->m_Weights[1] = 0; in Calc()
231 pWeight->m_Weights[0] = in Calc()
[all …]
/dports/editors/texmaker/texmaker-5.0.3/pdfium/core/fxcodec/codec/
H A Dfx_codec_progress.cpp83 pixel_weights.m_Weights[0] = 65536 - pixel_weights.m_Weights[1]; in Calc()
161 pWeight->m_Weights[0] = 65536; in Calc()
162 pWeight->m_Weights[1] = 0; in Calc()
179 pWeight->m_Weights[0] = in Calc()
184 pWeight->m_Weights[1] = 65536 - pWeight->m_Weights[0]; in Calc()
195 pWeight->m_Weights[0] = 65536; in Calc()
196 pWeight->m_Weights[1] = 0; in Calc()
216 pWeight->m_Weights[1] = 0; in Calc()
234 pWeight->m_Weights[1] = 0; in Calc()
244 pWeight->m_Weights[1] = 0; in Calc()
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/dports/science/InsightToolkit/ITK-5.0.1/Modules/Filtering/DistanceMap/include/
H A DitkFastChamferDistanceImageFilter.hxx39 m_Weights[--dim] = 1.65849; in FastChamferDistanceImageFilter()
42 m_Weights[--dim] = 1.34065; in FastChamferDistanceImageFilter()
45 m_Weights[--dim] = 0.92644; in FastChamferDistanceImageFilter()
148 if ( center_value > -m_Weights[0] ) in GenerateDataND()
152 val[n] = center_value + m_Weights[n]; in GenerateDataND()
164 if ( center_value < m_Weights[0] ) in GenerateDataND()
168 val[n] = center_value - m_Weights[n]; in GenerateDataND()
237 if ( center_value > -m_Weights[0] ) in GenerateDataND()
241 val[n] = center_value + m_Weights[n]; in GenerateDataND()
254 if ( center_value < m_Weights[0] ) in GenerateDataND()
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/dports/math/saga/saga-8.1.3/saga-gis/src/tools/terrain_analysis/ta_hydrology/
H A DFlow_AreaDownslope.cpp257 m_Weights.Create(m_pTool->Get_System(), SG_DATATYPE_Byte); in On_Execute()
259 m_pTool->Set_Parameter("WEIGHTS" , &m_Weights); in On_Execute()
280 m_Weights.Destroy(); in On_Execute_Finish()
300 m_Weights.Assign(0.); in On_Execute_Position()
301 m_Weights.Set_Value(Get_xGrid(), Get_yGrid(), 1.); in On_Execute_Position()
305 m_Weights.Set_Value(Get_xGrid(), Get_yGrid(), 1.); in On_Execute_Position()
309 m_Weights.Set_Value(Get_xGrid(), Get_yGrid(), 1.); in On_Execute_Position()
H A DFlow_AreaDownslope.h92 CSG_Grid m_Weights;
/dports/editors/texmaker/texmaker-5.0.3/pdfium/core/fxge/dib/
H A Dfx_dib_engine.cpp79 pixel_weights.m_Weights[0] = 65536; in Calc()
84 pixel_weights.m_Weights[0] = 65536 - pixel_weights.m_Weights[1]; in Calc()
109 pixel_weights.m_Weights[0] = in Calc()
122 pixel_weights.m_Weights[1] = in Calc()
128 pixel_weights.m_Weights[0] = in Calc()
134 pixel_weights.m_Weights[0] = in Calc()
136 pixel_weights.m_Weights[1] = in Calc()
149 pixel_weights.m_Weights[0] = in Calc()
159 pixel_weights.m_Weights[2] = in Calc()
179 pixel_weights.m_Weights[0] = 65536; in Calc()
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/dports/science/InsightToolkit/ITK-5.0.1/Modules/Numerics/Statistics/include/
H A DitkMixtureModelComponentBase.hxx65 os << m_Weights << std::endl; in PrintSelf()
77 m_Weights = WeightArrayType( m_Sample->Size() ); in SetSample()
145 if ( index < m_Weights.size() ) in SetWeight()
147 ( m_Weights )[index] = value; in SetWeight()
160 if ( index < m_Weights.Size() ) in GetWeight()
162 return m_Weights[index]; in GetWeight()
/dports/science/InsightToolkit/ITK-5.0.1/Modules/Numerics/Optimizersv4/include/
H A DitkObjectToObjectOptimizerBase.hxx68 if( this->m_Weights.Size() > 0 ) in PrintSelf()
70 os << indent << "m_Weights: " << this->m_Weights << std::endl; in PrintSelf()
172 if( this->m_Weights.Size() > 0 ) in StartOptimization()
174 if( this->m_Weights.Size() != this->m_Metric->GetNumberOfLocalParameters() ) in StartOptimization()
176 itkExceptionMacro("Size of weights (" << this->m_Weights.Size() in StartOptimization()
182 for( SizeType i=0; i < this->m_Weights.Size(); i++ ) in StartOptimization()
184 … SValueType difference = std::fabs( NumericTraits<SValueType>::OneValue() - this->m_Weights[i] ); in StartOptimization()
/dports/www/qt5-webengine/qtwebengine-everywhere-src-5.15.2/src/3rdparty/chromium/third_party/pdfium/core/fxge/dib/
H A Dcstretchengine.cpp72 pixel_weights.m_Weights[0] = 65536; in Calc()
74 pixel_weights.m_Weights[1] = in Calc()
78 pixel_weights.m_Weights[0] = 65536 - pixel_weights.m_Weights[1]; in Calc()
98 pixel_weights.m_Weights[0] = in Calc()
111 pixel_weights.m_Weights[1] = in Calc()
117 pixel_weights.m_Weights[0] = in Calc()
123 pixel_weights.m_Weights[0] = in Calc()
125 pixel_weights.m_Weights[1] = in Calc()
138 pixel_weights.m_Weights[0] = in Calc()
148 pixel_weights.m_Weights[2] = in Calc()
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/dports/lang/spidermonkey60/firefox-60.9.0/modules/pdfium/pdfium/core/fxge/dib/
H A Dfx_dib_engine.cpp89 pixel_weights.m_Weights[0] = 65536; in Calc()
91 pixel_weights.m_Weights[1] = FXSYS_round( in Calc()
94 pixel_weights.m_Weights[0] = 65536 - pixel_weights.m_Weights[1]; in Calc()
119 pixel_weights.m_Weights[0] = in Calc()
132 pixel_weights.m_Weights[1] = in Calc()
138 pixel_weights.m_Weights[0] = in Calc()
144 pixel_weights.m_Weights[0] = in Calc()
146 pixel_weights.m_Weights[1] = in Calc()
159 pixel_weights.m_Weights[0] = in Calc()
169 pixel_weights.m_Weights[2] = in Calc()
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/dports/science/InsightToolkit/ITK-5.0.1/Modules/Segmentation/LevelSets/include/
H A DitkShapePriorMAPCostFunction.hxx37 m_Weights.Fill(1.0); in ShapePriorMAPCostFunction()
52 os << indent << "Weights: " << m_Weights << std::endl; in PrintSelf()
96 MeasureType output = counter * m_Weights[0]; in ComputeLogInsideTerm()
117 measure *= m_Weights[2]; in ComputeLogShapePriorTerm()
154 sum *= m_Weights[1]; in ComputeLogGradientTerm()
/dports/math/saga/saga-8.1.3/saga-gis/src/tools/terrain_analysis/ta_morphometry/
H A Dparam_scale.cpp474 …if( (m_Radius = Parameters("SIZE")->asInt()) < 1 || !m_Weights.Create(1 + 2 * m_Radius, 1 + 2 * m_… in Get_Weights()
482 for(int y=0; y<m_Weights.Get_NY(); y++) in Get_Weights()
484 for(int x=0; x<m_Weights.Get_NX(); x++) in Get_Weights()
486 m_Weights[y][x] = 1.0 / pow(1.0 + SG_Get_Length(m_Radius - x, m_Radius - y), Exponent); in Get_Weights()
506 for(int y=0; y<m_Weights.Get_NY(); y++) in Get_Normal()
510 for(int x=0; x<m_Weights.Get_NX(); x++) in Get_Normal()
512 double dw = m_Weights[y][x]; in Get_Normal()
594 …for(iy=0, jy=y-m_Radius, dy=-m_Radius*Get_Cellsize(); iy<m_Weights.Get_NY(); iy++, jy++, dy+=Get_C… in Get_Observed()
596 …for(ix=0, jx=x-m_Radius, dx=-m_Radius*Get_Cellsize(); ix<m_Weights.Get_NX(); ix++, jx++, dx+=Get_C… in Get_Observed()
602 dz *= m_Weights[iy][ix]; in Get_Observed()
H A DCurvature_UpDownSlope.cpp140 if( !m_Weights.Create(Get_System()) ) in On_Execute()
189 m_Weights.Destroy(); in On_Execute()
226 if( (Weights = m_Weights.asDouble(x, y)) > 0.0 ) in Get_Upslope()
254 m_Weights .Add_Value(ix, iy, Proportion[i]); in Get_Upslope()
H A DCurvature_UpDownSlope.h100 CSG_Grid *m_pDEM, *m_pC_Local, *m_pC_Up, *m_pC_Up_Local, *m_pC_Down, *m_pC_Down_Local, m_Weights; variable
/dports/math/saga/saga-8.1.3/saga-gis/src/tools/grid/grid_tools/
H A DGrid_Merge.cpp307 double w = m_Weights.asDouble(x, y); in On_Execute()
319 m_Weights.Destroy(); in On_Execute()
418 …if( !m_Weights.Create(m_pMosaic->Get_System(), m_pGrids->Get_Grid_Count() < 256 ? SG_DATATYPE_Byte… in Initialize()
428 if( !m_Weights.Create(m_pMosaic->Get_System(), SG_DATATYPE_Word) ) in Initialize()
435 m_Weights.Set_Scaling(m_pMosaic->Get_Cellsize()); in Initialize()
561 m_Weights .Set_Value(x, y, 1); in Set_Value()
566 m_Weights .Add_Value(x, y, 1); in Set_Value()
585 m_Weights .Set_Value(x, y, Weight); in Set_Value()
589 double d = (Weight - m_Weights.asDouble(x, y)) / m_dBlend; in Set_Value()
594 m_Weights .Set_Value(x, y, Weight); in Set_Value()
[all …]
/dports/www/chromium-legacy/chromium-88.0.4324.182/third_party/pdfium/core/fxge/dib/
H A Dcstretchengine.cpp71 pixel_weights.m_Weights[0] = 65536; in Calc()
73 pixel_weights.m_Weights[1] = in Calc()
77 pixel_weights.m_Weights[0] = 65536 - pixel_weights.m_Weights[1]; in Calc()
83 pixel_weights.m_Weights[0] = 65536; in Calc()
121 pixel_weights.m_Weights[idx] = FXSYS_roundf(weight * 65536); in Calc()
140 return idx < GetPixelWeightSize() ? &pWeight->m_Weights[idx] : nullptr; in GetValueFromPixelWeight()
/dports/science/iboview/ibo-view.20150427/src/Common/
H A DCxDiis.cpp186 m_Weights.resize( nMaxDim() ); in PerformDiis()
240 m_Weights[iUsedVecs[iThis]] = W1; in PerformDiis()
271 B(i, nDim) = -m_Weights[iUsedVecs[i]]; in PerformDiis()
272 B(nDim, i) = -m_Weights[iUsedVecs[i]]; in PerformDiis()

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