/dports/net/ipsumdump/ipsumdump-1.86/libclick-2.1/libsrc/ |
H A D | routerthread.cc | 210 RouterThread::set_cpu_share(unsigned min_frac, unsigned max_frac) in set_cpu_share() argument 212 if (min_frac == 0) in set_cpu_share() 213 min_frac = 1; in set_cpu_share() 214 if (min_frac > Task::MAX_UTILIZATION - 1) in set_cpu_share() 215 min_frac = Task::MAX_UTILIZATION - 1; in set_cpu_share() 218 if (max_frac < min_frac) in set_cpu_share() 219 max_frac = min_frac; in set_cpu_share() 220 _min_click_share = min_frac; in set_cpu_share()
|
/dports/misc/vxl/vxl-3.3.2/contrib/rpl/rrel/ |
H A D | rrel_muset_obj.h | 100 void set_min_inlier_fraction( double min_frac=0.25 ) 101 { min_frac_ = min_frac; }
|
/dports/science/afni/afni-AFNI_21.3.16/src/python_scripts/scripts/ |
H A D | timing_tool.py | 1502 self.min_frac = 0.3 # applies to timing_to_1D 1953 self.min_frac = val 1954 if self.min_frac < 0.0 or self.min_frac > 1.0: 1955 print('** invalid -min_frac = %g' % self.min_frac) 2744 if self.min_frac <= 0.0 or self.min_frac > 1.0: 2753 self.min_frac, self.per_run) 2893 if self.min_frac <= 0.0 or self.min_frac > 1.0: 2898 self.min_frac, self.per_run, 2983 if self.min_frac >= 0 and self.min_frac < 1: frac = self.min_frac
|
/dports/math/adept/adept-2.0.8/adept/ |
H A D | minimize_levenberg_marquardt.cpp | 350 Vector min_frac = -(x(ifree(new_min_bounds)) - min_x(ifree(new_min_bounds))) in minimize_levenberg_marquardt_bounded() local 352 mmin_frac = minval(min_frac); in minimize_levenberg_marquardt_bounded() 353 imin = new_min_bounds(minloc(min_frac)); in minimize_levenberg_marquardt_bounded()
|
/dports/biology/bfc/bfc-69ab176e/ |
H A D | bfc.h | 21 float min_frac; member
|
H A D | bfc.c | 28 opt->min_frac = .9; in bfc_opt_init()
|
/dports/biology/stringtie/stringtie-2.1.1/samtools-0.1.18/ |
H A D | bam_plcmd.c | 85 double min_frac; // for indels member 274 bca->min_frac = conf->min_frac; in mpileup() 446 mplp.min_frac = 0.002; mplp.min_support = 1; in bam_mpileup() 479 case 'F': mplp.min_frac = atof(optarg); break; in bam_mpileup() 524 …derr, " -F FLOAT minimum fraction of gapped reads for candidates [%g]\n", mplp.min_frac); in bam_mpileup()
|
/dports/biology/ugene/ugene-40.1/src/libs_3rdparty/samtools/src/samtools/ |
H A D | bam2bcf.h | 15 double min_frac; // for collecting indel candidates member
|
H A D | bam_plcmd.c | 86 double min_frac; // for indels member 300 bca->min_frac = conf->min_frac; in mpileup() 476 mplp.min_frac = 0.002; mplp.min_support = 1; in bam_mpileup() 579 …derr, " -F FLOAT minimum fraction of gapped reads for candidates [%g]\n", mplp.min_frac); in bam_mpileup()
|
/dports/math/gismo/gismo-21.12.0/src/gsCore/ |
H A D | gsMath.h | 402 T min_frac = frexp(a, &min_exp); 406 std::swap(min_frac, max_frac); 412 const T scaled_min_frac = math::ldexp(min_frac, min_exp-max_exp);
|
/dports/science/afni/afni-AFNI_21.3.16/doc/misc_scripts/AFNI_data6/FT_analysis/PPI/ |
H A D | cmd.ppi.2.make.regs | 110 -min_frac 0.3 \
|
/dports/biology/py-pysam/pysam-0.18.0/samtools/ |
H A D | bam2bcf.h | 65 double min_frac; // for collecting indel candidates member
|
H A D | bam_plcmd.c | 205 double min_frac; // for indels member 704 bca->min_frac = conf->min_frac; in mpileup() 1263 mplp.min_frac = 0.002; mplp.min_support = 1; in bam_mpileup() 1427 case 'F': mplp.min_frac = atof(optarg); deprecated(c); break; in bam_mpileup()
|
H A D | bam_plcmd.c.pysam.c | 207 double min_frac; // for indels member 706 bca->min_frac = conf->min_frac; in mpileup() 1265 mplp.min_frac = 0.002; mplp.min_support = 1; in bam_mpileup() 1429 case 'F': mplp.min_frac = atof(optarg); deprecated(c); break; in bam_mpileup()
|
H A D | bam2bcf_indel.c | 206 if ( !indel_support_ok && na >= bca->min_support && frac >= bca->min_frac ) in bcf_call_gap_prep() 223 … indel_support_ok = ( (double)n_alt / n_tot < bca->min_frac || n_alt < bca->min_support ) ? 0 : 1; in bcf_call_gap_prep()
|
/dports/biology/samtools/samtools-1.14/ |
H A D | bam2bcf.h | 65 double min_frac; // for collecting indel candidates member
|
H A D | bam_plcmd.c | 205 double min_frac; // for indels member 704 bca->min_frac = conf->min_frac; in mpileup() 1263 mplp.min_frac = 0.002; mplp.min_support = 1; in bam_mpileup() 1427 case 'F': mplp.min_frac = atof(optarg); deprecated(c); break; in bam_mpileup()
|
/dports/biology/bcftools/bcftools-1.14/ |
H A D | bam2bcf.h | 85 double min_frac; // for collecting indel candidates member
|
H A D | mpileup.c | 74 double min_frac; // for indels member 844 conf->bca->min_frac = conf->min_frac; in mpileup() 1152 " -F, --gap-frac FLOAT Minimum fraction of gapped reads [%g]\n", mplp->min_frac); in print_usage() 1205 mplp.min_frac = 0.05; mplp.indel_bias = 1.0; mplp.min_support = 2; in main_mpileup() 1399 case 'F': mplp.min_frac = atof(optarg); break; in main_mpileup() 1414 mplp.min_frac = 0.1; in main_mpileup() 1431 mplp.min_frac = 0.002; in main_mpileup()
|
/dports/biology/bio-mocha/bcftools-1.14/ |
H A D | bam2bcf.h | 85 double min_frac; // for collecting indel candidates member
|
H A D | mpileup.c | 74 double min_frac; // for indels member 844 conf->bca->min_frac = conf->min_frac; in mpileup() 1152 " -F, --gap-frac FLOAT Minimum fraction of gapped reads [%g]\n", mplp->min_frac); in print_usage() 1205 mplp.min_frac = 0.05; mplp.indel_bias = 1.0; mplp.min_support = 2; in main_mpileup() 1399 case 'F': mplp.min_frac = atof(optarg); break; in main_mpileup() 1414 mplp.min_frac = 0.1; in main_mpileup() 1431 mplp.min_frac = 0.002; in main_mpileup()
|
/dports/biology/py-pysam/pysam-0.18.0/bcftools/ |
H A D | bam2bcf.h | 85 double min_frac; // for collecting indel candidates member
|
H A D | mpileup.c | 74 double min_frac; // for indels member 844 conf->bca->min_frac = conf->min_frac; in mpileup() 1152 " -F, --gap-frac FLOAT Minimum fraction of gapped reads [%g]\n", mplp->min_frac); in print_usage() 1205 mplp.min_frac = 0.05; mplp.indel_bias = 1.0; mplp.min_support = 2; in main_mpileup() 1399 case 'F': mplp.min_frac = atof(optarg); break; in main_mpileup() 1414 mplp.min_frac = 0.1; in main_mpileup() 1431 mplp.min_frac = 0.002; in main_mpileup()
|
H A D | mpileup.c.pysam.c | 76 double min_frac; // for indels member 846 conf->bca->min_frac = conf->min_frac; in mpileup() 1154 " -F, --gap-frac FLOAT Minimum fraction of gapped reads [%g]\n", mplp->min_frac); in print_usage() 1207 mplp.min_frac = 0.05; mplp.indel_bias = 1.0; mplp.min_support = 2; in main_mpileup() 1401 case 'F': mplp.min_frac = atof(optarg); break; in main_mpileup() 1416 mplp.min_frac = 0.1; in main_mpileup() 1433 mplp.min_frac = 0.002; in main_mpileup()
|
/dports/science/afni/afni-AFNI_21.3.16/src/python_scripts/afnipy/ |
H A D | lib_timing.py | 501 def timing_to_1D(self, run_len, tr, min_frac, per_run=0, allow_warns=0, argument 534 thr_res = self.get_threshold_list(row, min_frac) 542 new_res = self.get_threshold_list(result, min_frac)
|