| Name | Date | Size | #Lines | LOC | ||
|---|---|---|---|---|---|---|
| .. | 03-May-2022 | - | ||||
| AUTHORS | H A D | 30-Jan-2020 | 916 | 21 | 15 | |
| COPYING | H A D | 30-Jan-2020 | 1.1 KiB | 21 | 17 | |
| ChangeLog | H A D | 30-Jan-2020 | 200.6 KiB | 5,949 | 4,720 | |
| INSTALL | H A D | 30-Jan-2020 | 1.2 KiB | 31 | 22 | |
| Makefile | H A D | 03-May-2022 | 2.7 KiB | 96 | 74 | |
| NEWS | H A D | 30-Jan-2020 | 26.8 KiB | 807 | 500 | |
| bam.c | H A D | 30-Jan-2020 | 11.6 KiB | 363 | 321 | |
| bam.h | H A D | 30-Jan-2020 | 24.8 KiB | 803 | 271 | |
| bam_aux.c | H A D | 30-Jan-2020 | 5.6 KiB | 257 | 185 | |
| bam_cat.c | H A D | 30-Jan-2020 | 5.7 KiB | 185 | 110 | |
| bam_color.c | H A D | 30-Jan-2020 | 2.7 KiB | 128 | 77 | |
| bam_endian.h | H A D | 30-Jan-2020 | 1 KiB | 43 | 39 | |
| bam_import.c | H A D | 30-Jan-2020 | 16 KiB | 486 | 469 | |
| bam_index.c | H A D | 30-Jan-2020 | 20.8 KiB | 720 | 642 | |
| bam_lpileup.c | H A D | 30-Jan-2020 | 4.9 KiB | 199 | 169 | |
| bam_mate.c | H A D | 30-Jan-2020 | 2.5 KiB | 71 | 65 | |
| bam_md.c | H A D | 30-Jan-2020 | 12.6 KiB | 385 | 362 | |
| bam_pileup.c | H A D | 30-Jan-2020 | 12.7 KiB | 438 | 379 | |
| bam_plcmd.c | H A D | 30-Jan-2020 | 19.1 KiB | 547 | 517 | |
| bam_reheader.c | H A D | 30-Jan-2020 | 1.5 KiB | 62 | 58 | |
| bam_rmdup.c | H A D | 30-Jan-2020 | 5.5 KiB | 207 | 188 | |
| bam_rmdupse.c | H A D | 30-Jan-2020 | 4 KiB | 160 | 146 | |
| bam_sort.c | H A D | 30-Jan-2020 | 13.4 KiB | 439 | 369 | |
| bam_stat.c | H A D | 30-Jan-2020 | 3.1 KiB | 78 | 74 | |
| bam_tview.c | H A D | 30-Jan-2020 | 13.3 KiB | 441 | 412 | |
| bedidx.c | H A D | 30-Jan-2020 | 3.8 KiB | 163 | 148 | |
| bgzf.c | H A D | 30-Jan-2020 | 19.5 KiB | 711 | 615 | |
| bgzf.h | H A D | 30-Jan-2020 | 4.5 KiB | 158 | 70 | |
| bgzip.c | H A D | 30-Jan-2020 | 5.8 KiB | 207 | 170 | |
| cut_target.c | H A D | 30-Jan-2020 | 5.5 KiB | 194 | 174 | |
| errmod.c | H A D | 30-Jan-2020 | 3.4 KiB | 131 | 115 | |
| errmod.h | H A D | 30-Jan-2020 | 442 | 25 | 12 | |
| faidx.c | H A D | 30-Jan-2020 | 10.5 KiB | 433 | 396 | |
| faidx.h | H A D | 30-Jan-2020 | 3.1 KiB | 104 | 17 | |
| kaln.c | H A D | 30-Jan-2020 | 14.9 KiB | 487 | 400 | |
| kaln.h | H A D | 30-Jan-2020 | 2 KiB | 68 | 33 | |
| khash.h | H A D | 30-Jan-2020 | 17.4 KiB | 529 | 242 | |
| klist.h | H A D | 30-Jan-2020 | 3.4 KiB | 97 | 89 | |
| knetfile.c | H A D | 30-Jan-2020 | 17.9 KiB | 633 | 512 | |
| knetfile.h | H A D | 30-Jan-2020 | 1.6 KiB | 76 | 45 | |
| kprobaln.c | H A D | 30-Jan-2020 | 10.3 KiB | 279 | 200 | |
| kprobaln.h | H A D | 30-Jan-2020 | 1.5 KiB | 50 | 17 | |
| kseq.h | H A D | 30-Jan-2020 | 8.1 KiB | 225 | 177 | |
| ksort.h | H A D | 30-Jan-2020 | 9.8 KiB | 282 | 216 | |
| kstring.c | H A D | 30-Jan-2020 | 5.2 KiB | 213 | 186 | |
| kstring.h | H A D | 30-Jan-2020 | 2.6 KiB | 118 | 98 | |
| phase.c | H A D | 30-Jan-2020 | 20.3 KiB | 688 | 635 | |
| razf.c | H A D | 30-Jan-2020 | 23.8 KiB | 854 | 773 | |
| razf.h | H A D | 30-Jan-2020 | 4 KiB | 135 | 76 | |
| razip.c | H A D | 30-Jan-2020 | 4 KiB | 142 | 135 | |
| sam.c | H A D | 30-Jan-2020 | 5.7 KiB | 180 | 166 | |
| sam.h | H A D | 30-Jan-2020 | 2.6 KiB | 99 | 25 | |
| sam_header.c | H A D | 30-Jan-2020 | 18.8 KiB | 737 | 604 | |
| sam_header.h | H A D | 30-Jan-2020 | 643 | 25 | 18 | |
| sam_view.c | H A D | 30-Jan-2020 | 13.3 KiB | 407 | 376 | |
| sample.c | H A D | 30-Jan-2020 | 2.9 KiB | 108 | 98 | |
| sample.h | H A D | 30-Jan-2020 | 396 | 18 | 13 | |
| samtools.1 | H A D | 30-Jan-2020 | 25.7 KiB | 995 | 898 |