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Searched refs:tgt_itr_prev (Results 1 – 4 of 4) sorted by relevance

/dports/biology/bio-mocha/bcftools-1.14/
H A Dvcfcall.c85 regitr_t *tgt_itr, *tgt_itr_prev, *tgt_itr_tmp; member
438 if ( !args->tgt_itr_prev ) // first record in tgt_flush()
441 else if ( strcmp(chr,args->tgt_itr_prev->seq) ) // first record on a new chromosome in tgt_flush()
443 tgt_flush_region(args,args->tgt_itr_prev->seq,args->tgt_itr_prev->beg+1,REGIDX_MAX); in tgt_flush()
447 tgt_flush_region(args,args->tgt_itr_prev->seq,args->tgt_itr_prev->beg,rec->pos-1); in tgt_flush()
452 if ( args->tgt_itr_prev ) in tgt_flush()
453 tgt_flush_region(args,args->tgt_itr_prev->seq,args->tgt_itr_prev->beg,REGIDX_MAX); in tgt_flush()
728 if ( args->tgt_itr_prev ) regitr_destroy(args->tgt_itr_prev); in destroy_data()
1155 if ( !args.tgt_itr_prev ) args.tgt_itr_prev = regitr_init(args.tgt_idx); in main_vcfcall()
1156 regitr_copy(args.tgt_itr_prev, args.tgt_itr); in main_vcfcall()
/dports/biology/bcftools/bcftools-1.14/
H A Dvcfcall.c85 regitr_t *tgt_itr, *tgt_itr_prev, *tgt_itr_tmp; member
438 if ( !args->tgt_itr_prev ) // first record in tgt_flush()
441 else if ( strcmp(chr,args->tgt_itr_prev->seq) ) // first record on a new chromosome in tgt_flush()
443 tgt_flush_region(args,args->tgt_itr_prev->seq,args->tgt_itr_prev->beg+1,REGIDX_MAX); in tgt_flush()
447 tgt_flush_region(args,args->tgt_itr_prev->seq,args->tgt_itr_prev->beg,rec->pos-1); in tgt_flush()
452 if ( args->tgt_itr_prev ) in tgt_flush()
453 tgt_flush_region(args,args->tgt_itr_prev->seq,args->tgt_itr_prev->beg,REGIDX_MAX); in tgt_flush()
728 if ( args->tgt_itr_prev ) regitr_destroy(args->tgt_itr_prev); in destroy_data()
1155 if ( !args.tgt_itr_prev ) args.tgt_itr_prev = regitr_init(args.tgt_idx); in main_vcfcall()
1156 regitr_copy(args.tgt_itr_prev, args.tgt_itr); in main_vcfcall()
/dports/biology/py-pysam/pysam-0.18.0/bcftools/
H A Dvcfcall.c85 regitr_t *tgt_itr, *tgt_itr_prev, *tgt_itr_tmp; member
438 if ( !args->tgt_itr_prev ) // first record in tgt_flush()
441 else if ( strcmp(chr,args->tgt_itr_prev->seq) ) // first record on a new chromosome in tgt_flush()
443 tgt_flush_region(args,args->tgt_itr_prev->seq,args->tgt_itr_prev->beg+1,REGIDX_MAX); in tgt_flush()
447 tgt_flush_region(args,args->tgt_itr_prev->seq,args->tgt_itr_prev->beg,rec->pos-1); in tgt_flush()
452 if ( args->tgt_itr_prev ) in tgt_flush()
453 tgt_flush_region(args,args->tgt_itr_prev->seq,args->tgt_itr_prev->beg,REGIDX_MAX); in tgt_flush()
728 if ( args->tgt_itr_prev ) regitr_destroy(args->tgt_itr_prev); in destroy_data()
1155 if ( !args.tgt_itr_prev ) args.tgt_itr_prev = regitr_init(args.tgt_idx); in main_vcfcall()
1156 regitr_copy(args.tgt_itr_prev, args.tgt_itr); in main_vcfcall()
H A Dvcfcall.c.pysam.c87 regitr_t *tgt_itr, *tgt_itr_prev, *tgt_itr_tmp; member
440 if ( !args->tgt_itr_prev ) // first record in tgt_flush()
443 else if ( strcmp(chr,args->tgt_itr_prev->seq) ) // first record on a new chromosome in tgt_flush()
445 tgt_flush_region(args,args->tgt_itr_prev->seq,args->tgt_itr_prev->beg+1,REGIDX_MAX); in tgt_flush()
449 tgt_flush_region(args,args->tgt_itr_prev->seq,args->tgt_itr_prev->beg,rec->pos-1); in tgt_flush()
454 if ( args->tgt_itr_prev ) in tgt_flush()
455 tgt_flush_region(args,args->tgt_itr_prev->seq,args->tgt_itr_prev->beg,REGIDX_MAX); in tgt_flush()
730 if ( args->tgt_itr_prev ) regitr_destroy(args->tgt_itr_prev); in destroy_data()
1157 if ( !args.tgt_itr_prev ) args.tgt_itr_prev = regitr_init(args.tgt_idx); in main_vcfcall()
1158 regitr_copy(args.tgt_itr_prev, args.tgt_itr); in main_vcfcall()