Searched refs:topologyPr (Results 1 – 5 of 5) sorted by relevance
| /dports/biology/mrbayes/MrBayes-3.2.7/src/ |
| H A D | model.c | 1902 if (!strcmp(modelParams[i].topologyPr, "Speciestree")) in CheckModel()
14006 if (strcmp(modelParams[part1].topologyPr, modelParams[part2].topologyPr)) in IsModelSame()
14011 …if (!strcmp(modelParams[part1].topologyPr, "Constraints") && !strcmp(modelParams[part2].topologyPr… in IsModelSame()
19168 if (!strcmp(mp->topologyPr, "Uniform")) in SetModelParams()
19187 if (!strcmp(mp->topologyPr, "Speciestree")) in SetModelParams()
19232 else if (!strcmp(mp->topologyPr,"Fixed")) in SetModelParams()
23586 if (!strcmp(mp->topologyPr,"Uniform")) in ShowParameters()
23588 else if (!strcmp(mp->topologyPr,"Speciestree")) in ShowParameters()
23590 else if (!strcmp(mp->topologyPr,"Constraints")) in ShowParameters()
23595 if (!strcmp(mp->topologyPr,"Constraints")) in ShowParameters()
[all …]
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| H A D | bayes.c | 783 …strcpy(defaultModel.topologyPr, "Uniform"); /* prior for tree topology … in InitializeMrBayes()
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| H A D | bayes.h | 1072 char topologyPr[100]; /* prior for tree topology */ member
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| H A D | command.c | 11502 MrBayesPrint (" Topologypr Uniform/Constraints/Fixed/ %s", mp->topologyPr); in GetUserHelp()
11503 if (!strcmp(mp->topologyPr, "Constraints")) in GetUserHelp()
11523 else if (!strcmp(mp->topologyPr, "Fixed")) in GetUserHelp()
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| H A D | mcmc.c | 2417 if (numTopologies > 1 && !strcmp(modelParams[0].topologyPr,"Speciestree")) in DoMcmc()
11430 if (strcmp(modelParams[0].topologyPr,"Speciestree") == 0) in PrintCheckPoint()
17119 if (strcmp(modelParams[0].topologyPr,"Speciestree") == 0) in RunChain()
17132 if (strcmp(modelParams[0].topologyPr,"Speciestree") == 0) in RunChain()
17145 if (strcmp(modelParams[0].topologyPr,"Speciestree") == 0) in RunChain()
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