/dports/biology/iqtree/IQ-TREE-2.0.6/model/ |
H A D | modelfactorymixlen.cpp | 71 double treelen[tree->mixlen]; in sortClassesByTreeLength() local 73 memset(treelen, 0, sizeof(double)*tree->mixlen); in sortClassesByTreeLength() 79 treelen[j] += brlen[i]; in sortClassesByTreeLength() 83 quicksort(treelen, 0, tree->mixlen-1, index); in sortClassesByTreeLength()
|
/dports/net/liveMedia/live/liveMedia/ |
H A D | MP3InternalsHuffman.cpp | 332 unsigned int treelen; /*length of decoder tree */ member 354 &rsf_ht[n].treelen, &rsf_ht[n].xlen, &rsf_ht[n].ylen, &rsf_ht[n].linbits); in read_decoder_table() 380 rsf_ht[n].treelen = rsf_ht[t].treelen; in read_decoder_table() 395 new unsigned char[2*(rsf_ht[n].treelen)]; in read_decoder_table() 396 if ((rsf_ht[n].val == NULL) && ( rsf_ht[n].treelen != 0 )){ in read_decoder_table() 402 for (i=0;(unsigned)i<rsf_ht[n].treelen; i++) { in read_decoder_table() 625 if (h->treelen == 0) return 0; in rsf_huffman_decoder() 646 } while (level || (point < h->treelen) ); in rsf_huffman_decoder() 794 } while (mask || (point < h->treelen)); in lookupHuffmanTableEntry() 851 if (h->treelen == 0) return; in rsf_huffman_encoder()
|
/dports/biology/mafft/mafft-7.267-without-extensions/core/ |
H A D | newick2mafft.rb | 82 treelen = tree.length 83 tree = zenhan + "(" + tree[poskakko+1..treelen]
|
H A D | regionalrealignment.rb | 78 treelen = tree.length 79 tree = zenhan + "(" + tree[poskakko+1..treelen]
|
H A D | splittbfast.c | 1158 int treelen = 0; // by Mathog, a guess in splitseq_mq() local 1254 treelen = 0; in splitseq_mq() 1258 treelen += sprintf( tmptree, "%d", scores[j].numinseq+1 ); in splitseq_mq() 1262 *tree = (char *)calloc( treelen + nin + 15, sizeof( char ) ); in splitseq_mq() 2374 treelen = 0; in splitseq_mq() 2376 treelen += strlen( children[i] ); in splitseq_mq() 2377 *tree = calloc( treelen + nin * 3, sizeof ( char ) ); in splitseq_mq() 2405 parttree[i] = calloc( treelen + nin * 5, sizeof ( char ) ); in splitseq_mq()
|
/dports/ports-mgmt/pkg/pkg-1.17.5/libpkg/ |
H A D | packing.c | 287 size_t treelen; in packing_append_tree() local 291 treelen = strlen(treepath); in packing_append_tree() 305 if (fts_e->fts_pathlen <= treelen) in packing_append_tree() 312 fputs(fts_e->fts_path + treelen + 1, sb->fp); in packing_append_tree()
|
/dports/security/gnutls/gnutls-3.6.16/lib/x509/ |
H A D | name_constraints.c | 697 unsigned int treelen; in ends_with() local 703 treelen = suffix->size; in ends_with() 704 if((treelen > 0) && (tree[0] == '.')) { in ends_with() 706 treelen--; in ends_with() 709 if (memcmp(str->data + str->size - treelen, tree, treelen) == 0 && in ends_with() 710 str->data[str->size - treelen -1] == '.') in ends_with()
|
/dports/audio/Maaate/Maaate-0.3.1/src/mpeg/ |
H A D | layer3.cc | 614 int treelen; // 3rd col member 668 unsigned int treelen; // length of decoder tree member 709 ht[n].treelen = hufftab[n].treelen; in read_decoder_table() 727 ht[n].treelen = ht[t].treelen; in read_decoder_table() 735 calloc(2 * (ht[n].treelen)+1, sizeof(unsigned char)); in read_decoder_table() 739 << 2 * (ht[n].treelen) << "\t" in read_decoder_table() 744 for (i = 0; i < ht[n].treelen; i++) { in read_decoder_table() 1562 if ( h->treelen == 0) { in huffman_decoder() 1586 } while (level || (point < ht->treelen) ); in huffman_decoder()
|
/dports/biology/migrate/migrate-3.6.11/src/ |
H A D | tree.h | 70 void calc_treelength (node * p, MYREAL *treelen);
|
H A D | world.c | 4245 MYREAL treelen; in chance_swap_tree() local 4292 treelen = tthis->treelen; in chance_swap_tree() 4293 tthis->treelen = that->treelen; in chance_swap_tree() 4294 that->treelen = treelen; in chance_swap_tree() 4330 world->treelen = 0.0; in polish_world() 4331 calc_treelength (world->root->next->back, &world->treelen); in polish_world() 4335 world->treelen = 0.0; in polish_world() 4385 MYREAL treelen; in chance_swap_tree_unreadable_obsolete() local 4473 treelen = tthis->treelen; in chance_swap_tree_unreadable_obsolete() 4474 tthis->treelen = that->treelen; in chance_swap_tree_unreadable_obsolete() [all …]
|
H A D | mcmc1.c | 371 world->treelen = 0.0; in tree_update() 372 calc_treelength (world->root->next->back, &world->treelen); in tree_update() 381 world->treelen = 0.0; in tree_update() 382 calc_treelength (world->root->next->back, &world->treelen); in tree_update() 1580 (*proposal)->treelen = 0.0; in reset_simple_proposal_variables()
|
H A D | uep.c | 1046 (proposal->world->options->ueprate * proposal->treelen); in sum_ueplike() 1348 proposal->treelen = in pseudo_ueplikelihood() 1349 calc_pseudotreelength (proposal, proposal->world->treelen); in pseudo_ueplikelihood() 1470 return LOG (like) - (world->options->ueprate * world->treelen); in ueplikelihood()
|
H A D | migration.h | 1118 MYREAL treelen; member 1417 MYREAL treelen; member
|
H A D | main.c | 1756 world->treelen = 0.0; in setup_locus() 1757 calc_treelength (world->root->next->back, &world->treelen); in setup_locus() 1762 world->treelen = 0.0; in setup_locus() 1764 calc_treelength (world->root->next->back, &world->treelen); in setup_locus()
|
H A D | tree.c | 5359 calc_treelength (node * p, MYREAL *treelen) in calc_treelength() argument 5371 calc_treelength (pn, treelen); in calc_treelength() 5373 calc_treelength (pnn, treelen); in calc_treelength() 5380 *treelen += pn->tyme - p->tyme; in calc_treelength() 5384 calc_pseudotreelength (proposal_fmt * proposal, MYREAL treelen) in calc_pseudotreelength() argument 5397 len = treelen - (obt - ot) + (proposal->time - ot); in calc_pseudotreelength() 5403 len = treelen - (obt - ot) - (rt - tt) + in calc_pseudotreelength() 5414 len = treelen - (obt - ot) + (proposal->time - ot) - (rt - tt) + in calc_pseudotreelength() 5421 len = treelen - (obt - ot) - (obt - tt) + (proposal->time - ot) in calc_pseudotreelength()
|
/dports/multimedia/smpeg/smpeg-0.4.4/ |
H A D | MPEGaudio.h | 111 unsigned int treelen; member
|
/dports/multimedia/smpeg2/smpeg2-2.0.0/ |
H A D | MPEGaudio.h | 115 unsigned int treelen; member
|
/dports/audio/sdl_mixer/SDL_mixer-1.2.12/Xcode/Frameworks/smpeg.framework/Versions/A/Headers/ |
H A D | MPEGaudio.h | 115 unsigned int treelen;
|
/dports/audio/splay/splay-0.9.5.2/libs/ |
H A D | mpegsound.h | 139 unsigned int treelen; member
|
/dports/biology/iqtree/IQ-TREE-2.0.6/tree/ |
H A D | phylotreemixlen.cpp | 267 double treelen = treeLength(); in initializeMixlen() local 272 relative_treelen[i] = treelen * relative_rate->getRate(i); in initializeMixlen()
|
/dports/chinese/tin/tin-2.4.5/src/ |
H A D | save.c | 1833 int len, namelen, tagged, treelen; in build_attachment_line() local 1867 treelen = cCOLS - 13 - info_len - namelen; in build_attachment_line() 1868 tree = build_tree(part->depth, treelen, i); in build_attachment_line()
|
/dports/news/tin/tin-2.4.5/src/ |
H A D | save.c | 1833 int len, namelen, tagged, treelen; in build_attachment_line() local 1867 treelen = cCOLS - 13 - info_len - namelen; in build_attachment_line() 1868 tree = build_tree(part->depth, treelen, i); in build_attachment_line()
|
/dports/multimedia/smpeg2/smpeg2-2.0.0/audio/ |
H A D | mpeglayer3.cpp | 649 if(!(level || ((unsigned)point<ht->treelen))) in huffmandecoder_1() 690 if(!(level || ((unsigned)point<ht->treelen))) in huffmandecoder_2() 770 if(h->treelen) in layer3huffmandecode()
|
/dports/multimedia/smpeg/smpeg-0.4.4/audio/ |
H A D | mpeglayer3.cpp | 649 if(!(level || ((unsigned)point<ht->treelen))) in huffmandecoder_1() 690 if(!(level || ((unsigned)point<ht->treelen))) in huffmandecoder_2() 770 if(h->treelen) in layer3huffmandecode()
|
/dports/audio/mp3blaster/mp3blaster-3.2.6/mpegsound/ |
H A D | mpeglayer3.cc | 661 if(!(level || ((unsigned)point<ht->treelen))) in huffmandecoder_1() 702 if(!(level || ((unsigned)point<ht->treelen))) in huffmandecoder_2() 782 if(h->treelen) in layer3huffmandecode()
|