Searched refs:k_max_Q_M (Results 1 – 3 of 3) sorted by relevance
674 k_max_Q_M = mm1[ij] + referenceBPs1[ij]; in pf2D_linear()678 k_max_Q_M, in pf2D_linear()697 matrices->k_max_Q_M[ij], in pf2D_linear()1224 k_max_Q_M = matrices->k_max_Q_M; in pf2D_circ()2900 *k_min_Q_M, *k_max_Q_M, in backtrack_qcM() local2924 k_max_Q_M = matrices->k_max_Q_M; in backtrack_qcM()3295 k_max_Q_M = matrices->k_max_Q_M; in backtrack()3520 cnt1 <= k_max_Q_M[ii - k + 1]; in backtrack()3586 cnt1 <= k_max_Q_M[ii - k + 1]; in backtrack()3810 k_max_Q_M = matrices->k_max_Q_M; in backtrack_qm()[all …]
300 int *k_max_Q_M; member
1428 vars->k_max_Q_M = NULL; in pf_matrices_alloc_2Dfold()1477 vars->k_max_Q_M = (int *)vrna_alloc(sizeof(int) * size); in pf_matrices_alloc_2Dfold()1581 for (cnt1 = self->k_min_Q_M[ij]; cnt1 <= self->k_max_Q_M[ij]; cnt1++) in pf_matrices_free_2Dfold()1603 free(self->k_max_Q_M); in pf_matrices_free_2Dfold()