Searched refs:k_min_F3 (Results 1 – 3 of 3) sorted by relevance
810 vars->k_min_F3 = NULL; in mfe_matrices_alloc_2Dfold()867 vars->k_min_F3 = (int *)vrna_alloc(sizeof(int) * lin_size); in mfe_matrices_alloc_2Dfold()991 for (cnt1 = self->k_min_F3[i]; cnt1 <= self->k_max_F3[i]; cnt1++) in mfe_matrices_free_2Dfold()997 if (self->k_min_F3[i] < INF) { in mfe_matrices_free_2Dfold()998 self->E_F3[i] += self->k_min_F3[i]; in mfe_matrices_free_2Dfold()1000 self->l_min_F3[i] += self->k_min_F3[i]; in mfe_matrices_free_2Dfold()1001 self->l_max_F3[i] += self->k_min_F3[i]; in mfe_matrices_free_2Dfold()1009 free(self->k_min_F3); in mfe_matrices_free_2Dfold()
119 int *k_min_F3; member
1288 matrices->k_min_F3[cnt1] = matrices->k_max_F3[cnt1] = 0; in mfe_linear()1320 &matrices->k_min_F3[j], in mfe_linear()1326 preparePosteriorBoundaries(matrices->k_max_F3[j] - matrices->k_min_F3[j] + 1, in mfe_linear()1327 matrices->k_min_F3[j], in mfe_linear()1335 matrices->k_min_F3[j], in mfe_linear()1343 for (cnt1 = matrices->k_min_F3[j + 1]; cnt1 <= matrices->k_max_F3[j + 1]; cnt1++) { in mfe_linear()4011 vars->k_min_values_f3 = m->k_min_F3; in crosslink()