1 /*
2 * Copyright 2011, Ben Langmead <langmea@cs.jhu.edu>
3 *
4 * This file is part of Bowtie 2.
5 *
6 * Bowtie 2 is free software: you can redistribute it and/or modify
7 * it under the terms of the GNU General Public License as published by
8 * the Free Software Foundation, either version 3 of the License, or
9 * (at your option) any later version.
10 *
11 * Bowtie 2 is distributed in the hope that it will be useful,
12 * but WITHOUT ANY WARRANTY; without even the implied warranty of
13 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
14 * GNU General Public License for more details.
15 *
16 * You should have received a copy of the GNU General Public License
17 * along with Bowtie 2. If not, see <http://www.gnu.org/licenses/>.
18 */
19
20 #include "sse_util.h"
21 #include "aligner_swsse.h"
22 #include "limit.h"
23
24 /**
25 * Given a column of filled-in cells, save the checkpointed cells in cs_.
26 */
commitCol(__m128i * pvH,__m128i * pvE,__m128i * pvF,size_t coli)27 void Checkpointer::commitCol(
28 __m128i *pvH,
29 __m128i *pvE,
30 __m128i *pvF,
31 size_t coli)
32 {
33 }
34