1##description: evidence-based annotation of the human genome (GRCh37), version 19 (Ensembl 74) 2##provider: GENCODE 3##contact: gencode@sanger.ac.uk 4##format: gtf 5##date: 2013-12-06 6chr3 HAVANA gene 2140497 3099645 . + . gene_id "ENSG00000144619.10"; transcript_id "ENSG00000144619.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4"; level 1; havana_gene "OTTHUMG00000119031.9"; 7chr3 HAVANA transcript 2140497 2787371 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000422330.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-004"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337401.2"; 8chr3 HAVANA exon 2140497 2140662 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000422330.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-004"; exon_number 1; exon_id "ENSE00001762594.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337401.2"; 9chr3 HAVANA exon 2380862 2380917 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000422330.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-004"; exon_number 2; exon_id "ENSE00001528800.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337401.2"; 10chr3 HAVANA exon 2613100 2613242 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000422330.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-004"; exon_number 3; exon_id "ENSE00003620663.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337401.2"; 11chr3 HAVANA CDS 2613188 2613242 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000422330.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-004"; exon_number 3; exon_id "ENSE00003620663.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337401.2"; 12chr3 HAVANA start_codon 2613188 2613190 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000422330.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-004"; exon_number 3; exon_id "ENSE00003620663.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337401.2"; 13chr3 HAVANA exon 2777899 2778025 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000422330.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-004"; exon_number 4; exon_id "ENSE00003595035.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337401.2"; 14chr3 HAVANA CDS 2777899 2778025 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000422330.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-004"; exon_number 4; exon_id "ENSE00003595035.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337401.2"; 15chr3 HAVANA exon 2787206 2787371 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000422330.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-004"; exon_number 5; exon_id "ENSE00001634536.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337401.2"; 16chr3 HAVANA CDS 2787206 2787371 . + 1 gene_id "ENSG00000144619.10"; transcript_id "ENST00000422330.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-004"; exon_number 5; exon_id "ENSE00001634536.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337401.2"; 17chr3 HAVANA UTR 2140497 2140662 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000422330.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-004"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337401.2"; 18chr3 HAVANA UTR 2380862 2380917 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000422330.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-004"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337401.2"; 19chr3 HAVANA UTR 2613100 2613187 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000422330.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-004"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337401.2"; 20chr3 HAVANA transcript 2140550 3084662 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 21chr3 HAVANA exon 2140550 2140662 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 1; exon_id "ENSE00001742756.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 22chr3 HAVANA exon 2140958 2141333 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 2; exon_id "ENSE00001601880.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 23chr3 HAVANA exon 2380862 2380917 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 3; exon_id "ENSE00001528800.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 24chr3 HAVANA exon 2613100 2613242 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 4; exon_id "ENSE00003620663.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 25chr3 HAVANA CDS 2613188 2613242 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 4; exon_id "ENSE00003620663.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 26chr3 HAVANA start_codon 2613188 2613190 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 4; exon_id "ENSE00003620663.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 27chr3 HAVANA exon 2777899 2778025 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 5; exon_id "ENSE00003595035.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 28chr3 HAVANA CDS 2777899 2778025 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 5; exon_id "ENSE00003595035.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 29chr3 HAVANA exon 2787206 2787381 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 6; exon_id "ENSE00003558658.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 30chr3 HAVANA CDS 2787206 2787381 . + 1 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 6; exon_id "ENSE00003558658.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 31chr3 HAVANA exon 2861170 2861265 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 7; exon_id "ENSE00003530275.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 32chr3 HAVANA CDS 2861170 2861265 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 7; exon_id "ENSE00003530275.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 33chr3 HAVANA exon 2908436 2908633 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 8; exon_id "ENSE00003683442.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 34chr3 HAVANA CDS 2908436 2908633 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 8; exon_id "ENSE00003683442.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 35chr3 HAVANA exon 2928724 2928908 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 9; exon_id "ENSE00003564209.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 36chr3 HAVANA CDS 2928724 2928767 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 9; exon_id "ENSE00003564209.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 37chr3 HAVANA stop_codon 2928768 2928770 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 9; exon_id "ENSE00003564209.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 38chr3 HAVANA exon 2942369 2942505 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 10; exon_id "ENSE00003594764.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 39chr3 HAVANA exon 2944560 2944689 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 11; exon_id "ENSE00003611164.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 40chr3 HAVANA exon 2967313 2967463 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 12; exon_id "ENSE00003690093.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 41chr3 HAVANA exon 3030029 3030156 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 13; exon_id "ENSE00003634587.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 42chr3 HAVANA exon 3067786 3067961 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 14; exon_id "ENSE00003495004.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 43chr3 HAVANA exon 3072542 3072659 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 15; exon_id "ENSE00001741935.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 44chr3 HAVANA exon 3076316 3076474 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 16; exon_id "ENSE00003648372.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 45chr3 HAVANA exon 3078863 3079012 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 17; exon_id "ENSE00003615222.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 46chr3 HAVANA exon 3080617 3080687 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 18; exon_id "ENSE00003525538.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 47chr3 HAVANA exon 3081721 3081955 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 19; exon_id "ENSE00003609673.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 48chr3 HAVANA exon 3083994 3084106 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 20; exon_id "ENSE00003514183.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 49chr3 HAVANA exon 3084661 3084662 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; exon_number 21; exon_id "ENSE00001758800.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 50chr3 HAVANA UTR 2140550 2140662 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 51chr3 HAVANA UTR 2140958 2141333 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 52chr3 HAVANA UTR 2380862 2380917 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 53chr3 HAVANA UTR 2613100 2613187 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 54chr3 HAVANA UTR 2928768 2928908 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 55chr3 HAVANA UTR 2942369 2942505 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 56chr3 HAVANA UTR 2944560 2944689 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 57chr3 HAVANA UTR 2967313 2967463 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 58chr3 HAVANA UTR 3030029 3030156 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 59chr3 HAVANA UTR 3067786 3067961 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 60chr3 HAVANA UTR 3072542 3072659 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 61chr3 HAVANA UTR 3076316 3076474 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 62chr3 HAVANA UTR 3078863 3079012 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 63chr3 HAVANA UTR 3080617 3080687 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 64chr3 HAVANA UTR 3081721 3081955 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 65chr3 HAVANA UTR 3083994 3084106 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 66chr3 HAVANA UTR 3084661 3084662 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CNTN4-003"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337400.1"; 67chr3 HAVANA transcript 2140572 2778007 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000455083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-005"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337402.2"; 68chr3 HAVANA exon 2140572 2140662 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000455083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-005"; exon_number 1; exon_id "ENSE00001784079.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337402.2"; 69chr3 HAVANA exon 2142242 2142323 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000455083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-005"; exon_number 2; exon_id "ENSE00001626659.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337402.2"; 70chr3 HAVANA exon 2304030 2304114 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000455083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-005"; exon_number 3; exon_id "ENSE00001701778.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337402.2"; 71chr3 HAVANA exon 2380862 2380917 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000455083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-005"; exon_number 4; exon_id "ENSE00001528800.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337402.2"; 72chr3 HAVANA exon 2613100 2613242 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000455083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-005"; exon_number 5; exon_id "ENSE00003620663.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337402.2"; 73chr3 HAVANA CDS 2613188 2613242 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000455083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-005"; exon_number 5; exon_id "ENSE00003620663.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337402.2"; 74chr3 HAVANA start_codon 2613188 2613190 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000455083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-005"; exon_number 5; exon_id "ENSE00003620663.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337402.2"; 75chr3 HAVANA exon 2777899 2778007 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000455083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-005"; exon_number 6; exon_id "ENSE00001624904.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337402.2"; 76chr3 HAVANA CDS 2777899 2778007 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000455083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-005"; exon_number 6; exon_id "ENSE00001624904.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337402.2"; 77chr3 HAVANA UTR 2140572 2140662 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000455083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-005"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337402.2"; 78chr3 HAVANA UTR 2142242 2142323 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000455083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-005"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337402.2"; 79chr3 HAVANA UTR 2304030 2304114 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000455083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-005"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337402.2"; 80chr3 HAVANA UTR 2380862 2380917 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000455083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-005"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337402.2"; 81chr3 HAVANA UTR 2613100 2613187 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000455083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-005"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337402.2"; 82chr3 HAVANA transcript 2140610 3099637 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 83chr3 HAVANA exon 2140610 2140662 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 1; exon_id "ENSE00001707604.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 84chr3 HAVANA exon 2142242 2142323 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 2; exon_id "ENSE00001626659.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 85chr3 HAVANA exon 2380862 2380917 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 3; exon_id "ENSE00001528800.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 86chr3 HAVANA exon 2613100 2613242 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 4; exon_id "ENSE00003620663.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 87chr3 HAVANA CDS 2613188 2613242 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 4; exon_id "ENSE00003620663.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 88chr3 HAVANA start_codon 2613188 2613190 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 4; exon_id "ENSE00003620663.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 89chr3 HAVANA exon 2777899 2778025 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 5; exon_id "ENSE00003595035.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 90chr3 HAVANA CDS 2777899 2778025 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 5; exon_id "ENSE00003595035.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 91chr3 HAVANA exon 2787206 2787381 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 6; exon_id "ENSE00003558658.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 92chr3 HAVANA CDS 2787206 2787381 . + 1 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 6; exon_id "ENSE00003558658.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 93chr3 HAVANA exon 2861170 2861265 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 7; exon_id "ENSE00003530275.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 94chr3 HAVANA CDS 2861170 2861265 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 7; exon_id "ENSE00003530275.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 95chr3 HAVANA exon 2908436 2908633 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 8; exon_id "ENSE00003683442.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 96chr3 HAVANA CDS 2908436 2908633 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 8; exon_id "ENSE00003683442.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 97chr3 HAVANA exon 2924829 2924931 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 9; exon_id "ENSE00003649288.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 98chr3 HAVANA CDS 2924829 2924931 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 9; exon_id "ENSE00003649288.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 99chr3 HAVANA exon 2928724 2928908 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 10; exon_id "ENSE00003663088.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 100chr3 HAVANA CDS 2928724 2928908 . + 1 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 10; exon_id "ENSE00003663088.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 101chr3 HAVANA exon 2942369 2942505 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 11; exon_id "ENSE00003474195.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 102chr3 HAVANA CDS 2942369 2942505 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 11; exon_id "ENSE00003474195.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 103chr3 HAVANA exon 2944560 2944689 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 12; exon_id "ENSE00003544489.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 104chr3 HAVANA CDS 2944560 2944689 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 12; exon_id "ENSE00003544489.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 105chr3 HAVANA exon 2967313 2967463 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 13; exon_id "ENSE00003694230.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 106chr3 HAVANA CDS 2967313 2967463 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 13; exon_id "ENSE00003694230.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 107chr3 HAVANA exon 3030029 3030156 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 14; exon_id "ENSE00003655493.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 108chr3 HAVANA CDS 3030029 3030156 . + 1 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 14; exon_id "ENSE00003655493.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 109chr3 HAVANA exon 3067786 3067961 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 15; exon_id "ENSE00003681466.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 110chr3 HAVANA CDS 3067786 3067961 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 15; exon_id "ENSE00003681466.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 111chr3 HAVANA exon 3072539 3072659 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 16; exon_id "ENSE00003529385.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 112chr3 HAVANA CDS 3072539 3072659 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 16; exon_id "ENSE00003529385.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 113chr3 HAVANA exon 3076316 3076474 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 17; exon_id "ENSE00003677554.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 114chr3 HAVANA CDS 3076316 3076474 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 17; exon_id "ENSE00003677554.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 115chr3 HAVANA exon 3078863 3079012 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 18; exon_id "ENSE00003490499.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 116chr3 HAVANA CDS 3078863 3079012 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 18; exon_id "ENSE00003490499.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 117chr3 HAVANA exon 3080617 3080687 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 19; exon_id "ENSE00003544849.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 118chr3 HAVANA CDS 3080617 3080687 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 19; exon_id "ENSE00003544849.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 119chr3 HAVANA exon 3081721 3081955 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 20; exon_id "ENSE00003666648.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 120chr3 HAVANA CDS 3081721 3081955 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 20; exon_id "ENSE00003666648.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 121chr3 HAVANA exon 3083994 3084106 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 21; exon_id "ENSE00003502342.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 122chr3 HAVANA CDS 3083994 3084106 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 21; exon_id "ENSE00003502342.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 123chr3 HAVANA exon 3084661 3084847 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 22; exon_id "ENSE00003595816.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 124chr3 HAVANA CDS 3084661 3084847 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 22; exon_id "ENSE00003595816.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 125chr3 HAVANA exon 3085276 3085388 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 23; exon_id "ENSE00003694585.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 126chr3 HAVANA CDS 3085276 3085388 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 23; exon_id "ENSE00003694585.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 127chr3 HAVANA exon 3095491 3095659 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 24; exon_id "ENSE00003553752.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 128chr3 HAVANA CDS 3095491 3095659 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 24; exon_id "ENSE00003553752.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 129chr3 HAVANA exon 3097804 3099637 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 25; exon_id "ENSE00003503077.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 130chr3 HAVANA CDS 3097804 3097901 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 25; exon_id "ENSE00003503077.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 131chr3 HAVANA stop_codon 3097902 3097904 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; exon_number 25; exon_id "ENSE00003503077.1"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 132chr3 HAVANA UTR 2140610 2140662 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 133chr3 HAVANA UTR 2142242 2142323 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 134chr3 HAVANA UTR 2380862 2380917 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 135chr3 HAVANA UTR 2613100 2613187 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 136chr3 HAVANA UTR 3097902 3099637 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000418658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-009"; level 2; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337405.2"; 137chr3 HAVANA transcript 2140612 2141457 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000490876.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "CNTN4-007"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337404.1"; 138chr3 HAVANA exon 2140612 2140662 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000490876.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "CNTN4-007"; exon_number 1; exon_id "ENSE00001810091.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337404.1"; 139chr3 HAVANA exon 2140958 2141457 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000490876.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "CNTN4-007"; exon_number 2; exon_id "ENSE00001876945.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337404.1"; 140chr3 HAVANA transcript 2280513 3099637 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 141chr3 HAVANA exon 2280513 2280752 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 1; exon_id "ENSE00001441377.2"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 142chr3 HAVANA exon 2380862 2380917 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 2; exon_id "ENSE00001528800.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 143chr3 HAVANA exon 2613100 2613242 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 3; exon_id "ENSE00003620663.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 144chr3 HAVANA CDS 2613188 2613242 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 3; exon_id "ENSE00003620663.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 145chr3 HAVANA start_codon 2613188 2613190 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 3; exon_id "ENSE00003620663.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 146chr3 HAVANA exon 2777899 2778025 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 4; exon_id "ENSE00003595035.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 147chr3 HAVANA CDS 2777899 2778025 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 4; exon_id "ENSE00003595035.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 148chr3 HAVANA exon 2787206 2787381 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 5; exon_id "ENSE00003558658.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 149chr3 HAVANA CDS 2787206 2787381 . + 1 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 5; exon_id "ENSE00003558658.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 150chr3 HAVANA exon 2861170 2861265 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 6; exon_id "ENSE00003530275.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 151chr3 HAVANA CDS 2861170 2861265 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 6; exon_id "ENSE00003530275.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 152chr3 HAVANA exon 2908436 2908633 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 7; exon_id "ENSE00003683442.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 153chr3 HAVANA CDS 2908436 2908633 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 7; exon_id "ENSE00003683442.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 154chr3 HAVANA exon 2924829 2924931 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 8; exon_id "ENSE00003649288.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 155chr3 HAVANA CDS 2924829 2924931 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 8; exon_id "ENSE00003649288.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 156chr3 HAVANA exon 2928724 2928908 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 9; exon_id "ENSE00003663088.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 157chr3 HAVANA CDS 2928724 2928908 . + 1 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 9; exon_id "ENSE00003663088.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 158chr3 HAVANA exon 2942369 2942505 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 10; exon_id "ENSE00003474195.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 159chr3 HAVANA CDS 2942369 2942505 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 10; exon_id "ENSE00003474195.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 160chr3 HAVANA exon 2944560 2944689 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 11; exon_id "ENSE00003544489.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 161chr3 HAVANA CDS 2944560 2944689 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 11; exon_id "ENSE00003544489.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 162chr3 HAVANA exon 2967313 2967463 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 12; exon_id "ENSE00003694230.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 163chr3 HAVANA CDS 2967313 2967463 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 12; exon_id "ENSE00003694230.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 164chr3 HAVANA exon 3030029 3030156 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 13; exon_id "ENSE00003655493.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 165chr3 HAVANA CDS 3030029 3030156 . + 1 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 13; exon_id "ENSE00003655493.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 166chr3 HAVANA exon 3067786 3067961 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 14; exon_id "ENSE00003681466.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 167chr3 HAVANA CDS 3067786 3067961 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 14; exon_id "ENSE00003681466.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 168chr3 HAVANA exon 3072539 3072659 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 15; exon_id "ENSE00003529385.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 169chr3 HAVANA CDS 3072539 3072659 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 15; exon_id "ENSE00003529385.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 170chr3 HAVANA exon 3076316 3076474 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 16; exon_id "ENSE00003677554.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 171chr3 HAVANA CDS 3076316 3076474 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 16; exon_id "ENSE00003677554.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 172chr3 HAVANA exon 3078863 3079012 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 17; exon_id "ENSE00003490499.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 173chr3 HAVANA CDS 3078863 3079012 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 17; exon_id "ENSE00003490499.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 174chr3 HAVANA exon 3080617 3080687 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 18; exon_id "ENSE00003544849.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 175chr3 HAVANA CDS 3080617 3080687 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 18; exon_id "ENSE00003544849.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 176chr3 HAVANA exon 3081721 3081955 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 19; exon_id "ENSE00003666648.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 177chr3 HAVANA CDS 3081721 3081955 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 19; exon_id "ENSE00003666648.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 178chr3 HAVANA exon 3083994 3084106 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 20; exon_id "ENSE00003502342.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 179chr3 HAVANA CDS 3083994 3084106 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 20; exon_id "ENSE00003502342.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 180chr3 HAVANA exon 3084661 3084847 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 21; exon_id "ENSE00003595816.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 181chr3 HAVANA CDS 3084661 3084847 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 21; exon_id "ENSE00003595816.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 182chr3 HAVANA exon 3085276 3085388 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 22; exon_id "ENSE00003694585.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 183chr3 HAVANA CDS 3085276 3085388 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 22; exon_id "ENSE00003694585.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 184chr3 HAVANA exon 3095491 3095659 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 23; exon_id "ENSE00003553752.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 185chr3 HAVANA CDS 3095491 3095659 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 23; exon_id "ENSE00003553752.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 186chr3 HAVANA exon 3097804 3099637 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 24; exon_id "ENSE00003503077.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 187chr3 HAVANA CDS 3097804 3097901 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 24; exon_id "ENSE00003503077.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 188chr3 HAVANA stop_codon 3097902 3097904 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; exon_number 24; exon_id "ENSE00003503077.1"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 189chr3 HAVANA UTR 2280513 2280752 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 190chr3 HAVANA UTR 2380862 2380917 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 191chr3 HAVANA UTR 2613100 2613187 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 192chr3 HAVANA UTR 3097902 3099637 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239236.2"; 193chr3 HAVANA transcript 2553034 3030697 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000438282.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-006"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337403.3"; 194chr3 HAVANA exon 2553034 2553381 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000438282.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-006"; exon_number 1; exon_id "ENSE00001694342.2"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337403.3"; 195chr3 HAVANA exon 2613100 2613242 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000438282.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-006"; exon_number 2; exon_id "ENSE00003644400.1"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337403.3"; 196chr3 HAVANA exon 2777899 2778025 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000438282.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-006"; exon_number 3; exon_id "ENSE00003546944.1"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337403.3"; 197chr3 HAVANA exon 2787206 2787381 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000438282.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-006"; exon_number 4; exon_id "ENSE00003509920.1"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337403.3"; 198chr3 HAVANA exon 2861170 2861265 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000438282.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-006"; exon_number 5; exon_id "ENSE00003670352.1"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337403.3"; 199chr3 HAVANA exon 2908436 2908633 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000438282.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-006"; exon_number 6; exon_id "ENSE00003509889.1"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337403.3"; 200chr3 HAVANA exon 2924829 2924931 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000438282.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-006"; exon_number 7; exon_id "ENSE00003506678.1"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337403.3"; 201chr3 HAVANA exon 2928724 2928908 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000438282.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-006"; exon_number 8; exon_id "ENSE00003625912.1"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337403.3"; 202chr3 HAVANA exon 2942369 2942505 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000438282.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-006"; exon_number 9; exon_id "ENSE00003594764.1"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337403.3"; 203chr3 HAVANA exon 2944560 2944689 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000438282.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-006"; exon_number 10; exon_id "ENSE00003611164.1"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337403.3"; 204chr3 HAVANA exon 2967313 2967463 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000438282.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-006"; exon_number 11; exon_id "ENSE00003690093.1"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337403.3"; 205chr3 HAVANA exon 3030029 3030697 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000438282.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-006"; exon_number 12; exon_id "ENSE00001801709.1"; level 2; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337403.3"; 206chr3 HAVANA transcript 2553273 3079360 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000430505.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-010"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337406.5"; 207chr3 HAVANA exon 2553273 2553381 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000430505.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-010"; exon_number 1; exon_id "ENSE00001683142.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337406.5"; 208chr3 HAVANA exon 2613100 2613242 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000430505.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-010"; exon_number 2; exon_id "ENSE00003644400.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337406.5"; 209chr3 HAVANA exon 2777899 2778025 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000430505.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-010"; exon_number 3; exon_id "ENSE00003546944.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337406.5"; 210chr3 HAVANA exon 2787206 2787381 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000430505.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-010"; exon_number 4; exon_id "ENSE00003509920.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337406.5"; 211chr3 HAVANA exon 2861170 2861265 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000430505.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-010"; exon_number 5; exon_id "ENSE00003670352.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337406.5"; 212chr3 HAVANA exon 2908436 2908633 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000430505.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-010"; exon_number 6; exon_id "ENSE00003509889.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337406.5"; 213chr3 HAVANA exon 2924829 2924931 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000430505.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-010"; exon_number 7; exon_id "ENSE00003506678.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337406.5"; 214chr3 HAVANA exon 2928724 2928908 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000430505.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-010"; exon_number 8; exon_id "ENSE00003625912.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337406.5"; 215chr3 HAVANA exon 2942369 2942505 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000430505.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-010"; exon_number 9; exon_id "ENSE00003594764.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337406.5"; 216chr3 HAVANA exon 2944560 2944689 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000430505.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-010"; exon_number 10; exon_id "ENSE00003611164.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337406.5"; 217chr3 HAVANA exon 2967313 2967463 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000430505.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-010"; exon_number 11; exon_id "ENSE00003690093.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337406.5"; 218chr3 HAVANA exon 3030029 3030156 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000430505.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-010"; exon_number 12; exon_id "ENSE00003634587.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337406.5"; 219chr3 HAVANA exon 3067786 3067961 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000430505.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-010"; exon_number 13; exon_id "ENSE00003495004.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337406.5"; 220chr3 HAVANA exon 3072539 3072659 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000430505.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-010"; exon_number 14; exon_id "ENSE00003510685.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337406.5"; 221chr3 HAVANA exon 3076316 3076474 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000430505.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-010"; exon_number 15; exon_id "ENSE00003648372.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337406.5"; 222chr3 HAVANA exon 3078863 3079360 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000430505.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-010"; exon_number 16; exon_id "ENSE00001681409.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337406.5"; 223chr3 HAVANA transcript 2553354 2787381 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000434053.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-011"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337449.6"; 224chr3 HAVANA exon 2553354 2553381 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000434053.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-011"; exon_number 1; exon_id "ENSE00001677707.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337449.6"; 225chr3 HAVANA exon 2613100 2613242 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000434053.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-011"; exon_number 2; exon_id "ENSE00003620663.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337449.6"; 226chr3 HAVANA CDS 2613188 2613242 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000434053.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-011"; exon_number 2; exon_id "ENSE00003620663.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337449.6"; 227chr3 HAVANA start_codon 2613188 2613190 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000434053.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-011"; exon_number 2; exon_id "ENSE00003620663.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337449.6"; 228chr3 HAVANA exon 2671210 2671263 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000434053.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-011"; exon_number 3; exon_id "ENSE00001792206.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337449.6"; 229chr3 HAVANA CDS 2671210 2671263 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000434053.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-011"; exon_number 3; exon_id "ENSE00001792206.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337449.6"; 230chr3 HAVANA exon 2777899 2778025 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000434053.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-011"; exon_number 4; exon_id "ENSE00003595035.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337449.6"; 231chr3 HAVANA CDS 2777899 2778025 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000434053.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-011"; exon_number 4; exon_id "ENSE00003595035.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337449.6"; 232chr3 HAVANA exon 2787206 2787381 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000434053.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-011"; exon_number 5; exon_id "ENSE00003494744.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337449.6"; 233chr3 HAVANA CDS 2787206 2787381 . + 1 gene_id "ENSG00000144619.10"; transcript_id "ENST00000434053.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-011"; exon_number 5; exon_id "ENSE00003494744.1"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337449.6"; 234chr3 HAVANA UTR 2553354 2553381 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000434053.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-011"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337449.6"; 235chr3 HAVANA UTR 2613100 2613187 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000434053.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-011"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337449.6"; 236chr3 ENSEMBL transcript 2613025 3099645 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 237chr3 ENSEMBL exon 2613025 2613242 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 1; exon_id "ENSE00001788467.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 238chr3 ENSEMBL CDS 2613188 2613242 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 1; exon_id "ENSE00001788467.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 239chr3 ENSEMBL start_codon 2613188 2613190 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 1; exon_id "ENSE00001788467.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 240chr3 ENSEMBL exon 2777899 2778025 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 2; exon_id "ENSE00003595035.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 241chr3 ENSEMBL CDS 2777899 2778025 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 2; exon_id "ENSE00003595035.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 242chr3 ENSEMBL exon 2787206 2787381 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 3; exon_id "ENSE00003558658.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 243chr3 ENSEMBL CDS 2787206 2787381 . + 1 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 3; exon_id "ENSE00003558658.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 244chr3 ENSEMBL exon 2861170 2861265 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 4; exon_id "ENSE00003530275.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 245chr3 ENSEMBL CDS 2861170 2861265 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 4; exon_id "ENSE00003530275.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 246chr3 ENSEMBL exon 2908436 2908633 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 5; exon_id "ENSE00003683442.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 247chr3 ENSEMBL CDS 2908436 2908633 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 5; exon_id "ENSE00003683442.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 248chr3 ENSEMBL exon 2924829 2924931 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 6; exon_id "ENSE00003649288.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 249chr3 ENSEMBL CDS 2924829 2924931 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 6; exon_id "ENSE00003649288.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 250chr3 ENSEMBL exon 2928724 2928908 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 7; exon_id "ENSE00003663088.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 251chr3 ENSEMBL CDS 2928724 2928908 . + 1 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 7; exon_id "ENSE00003663088.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 252chr3 ENSEMBL exon 2942369 2942505 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 8; exon_id "ENSE00003474195.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 253chr3 ENSEMBL CDS 2942369 2942505 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 8; exon_id "ENSE00003474195.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 254chr3 ENSEMBL exon 2944560 2944689 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 9; exon_id "ENSE00003544489.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 255chr3 ENSEMBL CDS 2944560 2944689 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 9; exon_id "ENSE00003544489.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 256chr3 ENSEMBL exon 2967313 2967463 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 10; exon_id "ENSE00003694230.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 257chr3 ENSEMBL CDS 2967313 2967463 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 10; exon_id "ENSE00003694230.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 258chr3 ENSEMBL exon 3030029 3030156 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 11; exon_id "ENSE00003655493.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 259chr3 ENSEMBL CDS 3030029 3030156 . + 1 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 11; exon_id "ENSE00003655493.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 260chr3 ENSEMBL exon 3067786 3067961 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 12; exon_id "ENSE00003681466.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 261chr3 ENSEMBL CDS 3067786 3067961 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 12; exon_id "ENSE00003681466.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 262chr3 ENSEMBL exon 3072539 3072659 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 13; exon_id "ENSE00003529385.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 263chr3 ENSEMBL CDS 3072539 3072659 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 13; exon_id "ENSE00003529385.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 264chr3 ENSEMBL exon 3076316 3076474 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 14; exon_id "ENSE00003677554.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 265chr3 ENSEMBL CDS 3076316 3076474 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 14; exon_id "ENSE00003677554.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 266chr3 ENSEMBL exon 3078863 3079012 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 15; exon_id "ENSE00003490499.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 267chr3 ENSEMBL CDS 3078863 3079012 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 15; exon_id "ENSE00003490499.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 268chr3 ENSEMBL exon 3080617 3080687 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 16; exon_id "ENSE00003544849.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 269chr3 ENSEMBL CDS 3080617 3080687 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 16; exon_id "ENSE00003544849.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 270chr3 ENSEMBL exon 3081721 3081955 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 17; exon_id "ENSE00003666648.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 271chr3 ENSEMBL CDS 3081721 3081955 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 17; exon_id "ENSE00003666648.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 272chr3 ENSEMBL exon 3083994 3084106 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 18; exon_id "ENSE00003502342.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 273chr3 ENSEMBL CDS 3083994 3084106 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 18; exon_id "ENSE00003502342.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 274chr3 ENSEMBL exon 3084661 3084847 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 19; exon_id "ENSE00003595816.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 275chr3 ENSEMBL CDS 3084661 3084847 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 19; exon_id "ENSE00003595816.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 276chr3 ENSEMBL exon 3085276 3085388 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 20; exon_id "ENSE00003694585.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 277chr3 ENSEMBL CDS 3085276 3085388 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 20; exon_id "ENSE00003694585.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 278chr3 ENSEMBL exon 3095491 3095659 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 21; exon_id "ENSE00003553752.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 279chr3 ENSEMBL CDS 3095491 3095659 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 21; exon_id "ENSE00003553752.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 280chr3 ENSEMBL exon 3097804 3099645 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 22; exon_id "ENSE00001419282.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 281chr3 ENSEMBL CDS 3097804 3097901 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 22; exon_id "ENSE00001419282.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 282chr3 ENSEMBL stop_codon 3097902 3097904 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; exon_number 22; exon_id "ENSE00001419282.1"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 283chr3 ENSEMBL UTR 2613025 2613187 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 284chr3 ENSEMBL UTR 3097902 3099645 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000427331.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-202"; level 3; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS43041.1"; havana_gene "OTTHUMG00000119031.9"; 285chr3 HAVANA transcript 2777557 2787311 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000480113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-012"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337450.1"; 286chr3 HAVANA exon 2777557 2778025 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000480113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-012"; exon_number 1; exon_id "ENSE00001862393.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337450.1"; 287chr3 HAVANA exon 2787206 2787311 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000480113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-012"; exon_number 2; exon_id "ENSE00001914221.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337450.1"; 288chr3 ENSEMBL transcript 2908102 3098039 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 289chr3 ENSEMBL exon 2908102 2908185 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 1; exon_id "ENSE00002274305.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 290chr3 ENSEMBL exon 2908436 2908633 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 2; exon_id "ENSE00003509889.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 291chr3 ENSEMBL exon 2924829 2924931 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 3; exon_id "ENSE00003551068.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 292chr3 ENSEMBL CDS 2924834 2924931 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 3; exon_id "ENSE00003551068.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 293chr3 ENSEMBL start_codon 2924834 2924836 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 3; exon_id "ENSE00003551068.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 294chr3 ENSEMBL exon 2928724 2928908 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 4; exon_id "ENSE00003663088.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 295chr3 ENSEMBL CDS 2928724 2928908 . + 1 gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 4; exon_id "ENSE00003663088.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 296chr3 ENSEMBL exon 2942369 2942505 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 5; exon_id "ENSE00003474195.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 297chr3 ENSEMBL CDS 2942369 2942505 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 5; exon_id "ENSE00003474195.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 298chr3 ENSEMBL exon 2944560 2944689 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 6; exon_id "ENSE00003544489.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 299chr3 ENSEMBL CDS 2944560 2944689 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 6; exon_id "ENSE00003544489.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 300chr3 ENSEMBL exon 2967313 2967463 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 7; exon_id "ENSE00003694230.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 301chr3 ENSEMBL CDS 2967313 2967463 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 7; exon_id "ENSE00003694230.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 302chr3 ENSEMBL exon 3030029 3030156 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 8; exon_id "ENSE00003655493.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 303chr3 ENSEMBL CDS 3030029 3030156 . + 1 gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 8; exon_id "ENSE00003655493.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 304chr3 ENSEMBL exon 3067786 3067961 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 9; exon_id "ENSE00003681466.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 305chr3 ENSEMBL CDS 3067786 3067961 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 9; exon_id "ENSE00003681466.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 306chr3 ENSEMBL exon 3072539 3072659 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 10; exon_id "ENSE00003529385.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 307chr3 ENSEMBL CDS 3072539 3072659 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 10; exon_id "ENSE00003529385.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 308chr3 ENSEMBL exon 3076316 3076474 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 11; exon_id "ENSE00003677554.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 309chr3 ENSEMBL CDS 3076316 3076474 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 11; exon_id "ENSE00003677554.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 310chr3 ENSEMBL exon 3078863 3079012 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 12; exon_id "ENSE00003490499.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 311chr3 ENSEMBL CDS 3078863 3079012 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 12; exon_id "ENSE00003490499.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 312chr3 ENSEMBL exon 3080617 3080687 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 13; exon_id "ENSE00003544849.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 313chr3 ENSEMBL CDS 3080617 3080687 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 13; exon_id "ENSE00003544849.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 314chr3 ENSEMBL exon 3081721 3081955 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 14; exon_id "ENSE00003666648.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 315chr3 ENSEMBL CDS 3081721 3081955 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 14; exon_id "ENSE00003666648.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 316chr3 ENSEMBL exon 3083994 3084106 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 15; exon_id "ENSE00003502342.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 317chr3 ENSEMBL CDS 3083994 3084106 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 15; exon_id "ENSE00003502342.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 318chr3 ENSEMBL exon 3084661 3084847 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 16; exon_id "ENSE00003595816.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 319chr3 ENSEMBL CDS 3084661 3084847 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 16; exon_id "ENSE00003595816.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 320chr3 ENSEMBL exon 3085276 3085388 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 17; exon_id "ENSE00003694585.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 321chr3 ENSEMBL CDS 3085276 3085388 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 17; exon_id "ENSE00003694585.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 322chr3 ENSEMBL exon 3095491 3095659 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 18; exon_id "ENSE00003553752.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 323chr3 ENSEMBL CDS 3095491 3095659 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 18; exon_id "ENSE00003553752.1"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 324chr3 ENSEMBL exon 3097804 3098039 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 19; exon_id "ENSE00001528738.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 325chr3 ENSEMBL CDS 3097804 3097901 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 19; exon_id "ENSE00001528738.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 326chr3 ENSEMBL stop_codon 3097902 3097904 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; exon_number 19; exon_id "ENSE00001528738.2"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 327chr3 ENSEMBL UTR 2908102 2908185 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 328chr3 ENSEMBL UTR 2908436 2908633 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 329chr3 ENSEMBL UTR 2924829 2924833 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 330chr3 ENSEMBL UTR 3097902 3098039 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000358480.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-201"; level 3; tag "basic"; havana_gene "OTTHUMG00000119031.9"; 331chr3 HAVANA transcript 2908104 2928908 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000473058.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CNTN4-013"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337451.1"; 332chr3 HAVANA exon 2908104 2908185 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000473058.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CNTN4-013"; exon_number 1; exon_id "ENSE00001920912.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337451.1"; 333chr3 HAVANA exon 2908436 2908633 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000473058.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CNTN4-013"; exon_number 2; exon_id "ENSE00003509889.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337451.1"; 334chr3 HAVANA exon 2924829 2924931 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000473058.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CNTN4-013"; exon_number 3; exon_id "ENSE00003506678.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337451.1"; 335chr3 HAVANA exon 2928724 2928908 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000473058.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CNTN4-013"; exon_number 4; exon_id "ENSE00003625912.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337451.1"; 336chr3 HAVANA transcript 2924423 2928779 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000473173.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-014"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337452.1"; 337chr3 HAVANA exon 2924423 2924931 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000473173.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-014"; exon_number 1; exon_id "ENSE00001926274.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337452.1"; 338chr3 HAVANA exon 2928724 2928779 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000473173.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-014"; exon_number 2; exon_id "ENSE00001929016.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337452.1"; 339chr3 HAVANA transcript 2933899 3098039 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 340chr3 HAVANA exon 2933899 2933944 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 1; exon_id "ENSE00001528739.2"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 341chr3 HAVANA exon 2942369 2942505 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 2; exon_id "ENSE00003478415.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 342chr3 HAVANA CDS 2942413 2942505 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 2; exon_id "ENSE00003478415.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 343chr3 HAVANA start_codon 2942413 2942415 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 2; exon_id "ENSE00003478415.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 344chr3 HAVANA exon 2944560 2944689 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 3; exon_id "ENSE00003544489.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 345chr3 HAVANA CDS 2944560 2944689 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 3; exon_id "ENSE00003544489.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 346chr3 HAVANA exon 2967313 2967463 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 4; exon_id "ENSE00003694230.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 347chr3 HAVANA CDS 2967313 2967463 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 4; exon_id "ENSE00003694230.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 348chr3 HAVANA exon 3030029 3030156 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 5; exon_id "ENSE00003655493.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 349chr3 HAVANA CDS 3030029 3030156 . + 1 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 5; exon_id "ENSE00003655493.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 350chr3 HAVANA exon 3067786 3067961 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 6; exon_id "ENSE00003681466.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 351chr3 HAVANA CDS 3067786 3067961 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 6; exon_id "ENSE00003681466.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 352chr3 HAVANA exon 3072539 3072659 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 7; exon_id "ENSE00003529385.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 353chr3 HAVANA CDS 3072539 3072659 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 7; exon_id "ENSE00003529385.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 354chr3 HAVANA exon 3076316 3076474 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 8; exon_id "ENSE00003677554.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 355chr3 HAVANA CDS 3076316 3076474 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 8; exon_id "ENSE00003677554.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 356chr3 HAVANA exon 3078863 3079012 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 9; exon_id "ENSE00003490499.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 357chr3 HAVANA CDS 3078863 3079012 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 9; exon_id "ENSE00003490499.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 358chr3 HAVANA exon 3080617 3080687 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 10; exon_id "ENSE00003544849.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 359chr3 HAVANA CDS 3080617 3080687 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 10; exon_id "ENSE00003544849.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 360chr3 HAVANA exon 3081721 3081955 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 11; exon_id "ENSE00003666648.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 361chr3 HAVANA CDS 3081721 3081955 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 11; exon_id "ENSE00003666648.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 362chr3 HAVANA exon 3083994 3084106 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 12; exon_id "ENSE00003502342.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 363chr3 HAVANA CDS 3083994 3084106 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 12; exon_id "ENSE00003502342.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 364chr3 HAVANA exon 3084661 3084847 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 13; exon_id "ENSE00003595816.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 365chr3 HAVANA CDS 3084661 3084847 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 13; exon_id "ENSE00003595816.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 366chr3 HAVANA exon 3085276 3085388 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 14; exon_id "ENSE00003694585.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 367chr3 HAVANA CDS 3085276 3085388 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 14; exon_id "ENSE00003694585.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 368chr3 HAVANA exon 3095491 3095659 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 15; exon_id "ENSE00003553752.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 369chr3 HAVANA CDS 3095491 3095659 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 15; exon_id "ENSE00003553752.1"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 370chr3 HAVANA exon 3097804 3098039 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 16; exon_id "ENSE00001528738.2"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 371chr3 HAVANA CDS 3097804 3097901 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 16; exon_id "ENSE00001528738.2"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 372chr3 HAVANA stop_codon 3097902 3097904 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; exon_number 16; exon_id "ENSE00001528738.2"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 373chr3 HAVANA UTR 2933899 2933944 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 374chr3 HAVANA UTR 2942369 2942412 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 375chr3 HAVANA UTR 3097902 3098039 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000397459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-002"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000239237.2"; 376chr3 ENSEMBL transcript 2942366 3098039 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 377chr3 ENSEMBL exon 2942366 2942505 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 1; exon_id "ENSE00002318066.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 378chr3 ENSEMBL CDS 2942413 2942505 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 1; exon_id "ENSE00002318066.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 379chr3 ENSEMBL start_codon 2942413 2942415 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 1; exon_id "ENSE00002318066.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 380chr3 ENSEMBL exon 2944560 2944689 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 2; exon_id "ENSE00003544489.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 381chr3 ENSEMBL CDS 2944560 2944689 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 2; exon_id "ENSE00003544489.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 382chr3 ENSEMBL exon 2967313 2967463 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 3; exon_id "ENSE00003694230.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 383chr3 ENSEMBL CDS 2967313 2967463 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 3; exon_id "ENSE00003694230.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 384chr3 ENSEMBL exon 3030029 3030156 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 4; exon_id "ENSE00003655493.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 385chr3 ENSEMBL CDS 3030029 3030156 . + 1 gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 4; exon_id "ENSE00003655493.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 386chr3 ENSEMBL exon 3067786 3067961 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 5; exon_id "ENSE00003681466.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 387chr3 ENSEMBL CDS 3067786 3067961 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 5; exon_id "ENSE00003681466.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 388chr3 ENSEMBL exon 3072539 3072659 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 6; exon_id "ENSE00003529385.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 389chr3 ENSEMBL CDS 3072539 3072659 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 6; exon_id "ENSE00003529385.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 390chr3 ENSEMBL exon 3076316 3076474 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 7; exon_id "ENSE00003677554.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 391chr3 ENSEMBL CDS 3076316 3076474 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 7; exon_id "ENSE00003677554.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 392chr3 ENSEMBL exon 3078863 3079012 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 8; exon_id "ENSE00003490499.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 393chr3 ENSEMBL CDS 3078863 3079012 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 8; exon_id "ENSE00003490499.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 394chr3 ENSEMBL exon 3080617 3080687 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 9; exon_id "ENSE00003544849.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 395chr3 ENSEMBL CDS 3080617 3080687 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 9; exon_id "ENSE00003544849.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 396chr3 ENSEMBL exon 3081721 3081955 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 10; exon_id "ENSE00003666648.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 397chr3 ENSEMBL CDS 3081721 3081955 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 10; exon_id "ENSE00003666648.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 398chr3 ENSEMBL exon 3083994 3084106 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 11; exon_id "ENSE00003502342.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 399chr3 ENSEMBL CDS 3083994 3084106 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 11; exon_id "ENSE00003502342.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 400chr3 ENSEMBL exon 3084661 3084847 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 12; exon_id "ENSE00003595816.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 401chr3 ENSEMBL CDS 3084661 3084847 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 12; exon_id "ENSE00003595816.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 402chr3 ENSEMBL exon 3085276 3085388 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 13; exon_id "ENSE00003694585.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 403chr3 ENSEMBL CDS 3085276 3085388 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 13; exon_id "ENSE00003694585.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 404chr3 ENSEMBL exon 3095491 3095659 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 14; exon_id "ENSE00003553752.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 405chr3 ENSEMBL CDS 3095491 3095659 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 14; exon_id "ENSE00003553752.1"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 406chr3 ENSEMBL exon 3097804 3098039 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 15; exon_id "ENSE00001528738.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 407chr3 ENSEMBL CDS 3097804 3097901 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 15; exon_id "ENSE00001528738.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 408chr3 ENSEMBL stop_codon 3097902 3097904 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; exon_number 15; exon_id "ENSE00001528738.2"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 409chr3 ENSEMBL UTR 2942366 2942412 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 410chr3 ENSEMBL UTR 3097902 3098039 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000448906.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CNTN4-203"; level 3; tag "basic"; tag "CCDS"; ccdsid "CCDS2558.1"; havana_gene "OTTHUMG00000119031.9"; 411chr3 HAVANA transcript 2942395 2969315 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000473845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-015"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337472.2"; 412chr3 HAVANA exon 2942395 2942505 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000473845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-015"; exon_number 1; exon_id "ENSE00001846877.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337472.2"; 413chr3 HAVANA CDS 2942395 2942505 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000473845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-015"; exon_number 1; exon_id "ENSE00001846877.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337472.2"; 414chr3 HAVANA exon 2944560 2944689 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000473845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-015"; exon_number 2; exon_id "ENSE00003544489.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337472.2"; 415chr3 HAVANA CDS 2944560 2944689 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000473845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-015"; exon_number 2; exon_id "ENSE00003544489.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337472.2"; 416chr3 HAVANA exon 2967313 2967463 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000473845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-015"; exon_number 3; exon_id "ENSE00003694230.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337472.2"; 417chr3 HAVANA CDS 2967313 2967463 . + 2 gene_id "ENSG00000144619.10"; transcript_id "ENST00000473845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-015"; exon_number 3; exon_id "ENSE00003694230.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337472.2"; 418chr3 HAVANA exon 2968982 2969315 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000473845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-015"; exon_number 4; exon_id "ENSE00001885658.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337472.2"; 419chr3 HAVANA CDS 2968982 2969018 . + 1 gene_id "ENSG00000144619.10"; transcript_id "ENST00000473845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-015"; exon_number 4; exon_id "ENSE00001885658.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337472.2"; 420chr3 HAVANA stop_codon 2969019 2969021 . + 0 gene_id "ENSG00000144619.10"; transcript_id "ENST00000473845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-015"; exon_number 4; exon_id "ENSE00001885658.1"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337472.2"; 421chr3 HAVANA UTR 2969019 2969315 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000473845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CNTN4-015"; level 1; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "exp_conf"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337472.2"; 422chr3 HAVANA transcript 2942398 3040828 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000475817.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CNTN4-017"; level 2; tag "basic"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337471.1"; 423chr3 HAVANA exon 2942398 2942505 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000475817.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CNTN4-017"; exon_number 1; exon_id "ENSE00001886639.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337471.1"; 424chr3 HAVANA exon 2944560 2944689 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000475817.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CNTN4-017"; exon_number 2; exon_id "ENSE00003611164.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337471.1"; 425chr3 HAVANA exon 2967313 2967463 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000475817.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CNTN4-017"; exon_number 3; exon_id "ENSE00003690093.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337471.1"; 426chr3 HAVANA exon 3030029 3030156 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000475817.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CNTN4-017"; exon_number 4; exon_id "ENSE00003634587.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337471.1"; 427chr3 HAVANA exon 3040732 3040828 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000475817.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CNTN4-017"; exon_number 5; exon_id "ENSE00001861750.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337471.1"; 428chr3 HAVANA transcript 3081308 3099637 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000484686.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-016"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337454.1"; 429chr3 HAVANA exon 3081308 3081955 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000484686.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-016"; exon_number 1; exon_id "ENSE00001880444.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337454.1"; 430chr3 HAVANA exon 3083994 3084106 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000484686.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-016"; exon_number 2; exon_id "ENSE00003514183.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337454.1"; 431chr3 HAVANA exon 3084661 3084847 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000484686.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-016"; exon_number 3; exon_id "ENSE00003681457.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337454.1"; 432chr3 HAVANA exon 3085276 3085388 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000484686.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-016"; exon_number 4; exon_id "ENSE00003486548.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337454.1"; 433chr3 HAVANA exon 3095491 3095659 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000484686.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-016"; exon_number 5; exon_id "ENSE00003667179.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337454.1"; 434chr3 HAVANA exon 3097804 3099637 . + . gene_id "ENSG00000144619.10"; transcript_id "ENST00000484686.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CNTN4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CNTN4-016"; exon_number 6; exon_id "ENSE00003485292.1"; level 2; havana_gene "OTTHUMG00000119031.9"; havana_transcript "OTTHUMT00000337454.1"; 435chr3 HAVANA gene 2152093 2185925 . - . gene_id "ENSG00000227588.2"; transcript_id "ENSG00000227588.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "CNTN4-AS2"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "CNTN4-AS2"; level 1; havana_gene "OTTHUMG00000156185.2"; 436chr3 HAVANA transcript 2152093 2185925 . - . gene_id "ENSG00000227588.2"; transcript_id "ENST00000447256.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "CNTN4-AS2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CNTN4-AS2-001"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000156185.2"; havana_transcript "OTTHUMT00000343338.2"; 437chr3 HAVANA exon 2185814 2185925 . - . gene_id "ENSG00000227588.2"; transcript_id "ENST00000447256.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "CNTN4-AS2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CNTN4-AS2-001"; exon_number 1; exon_id "ENSE00001592168.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000156185.2"; havana_transcript "OTTHUMT00000343338.2"; 438chr3 HAVANA exon 2174045 2174134 . - . gene_id "ENSG00000227588.2"; transcript_id "ENST00000447256.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "CNTN4-AS2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CNTN4-AS2-001"; exon_number 2; exon_id "ENSE00001602338.2"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000156185.2"; havana_transcript "OTTHUMT00000343338.2"; 439chr3 HAVANA exon 2152093 2152316 . - . gene_id "ENSG00000227588.2"; transcript_id "ENST00000447256.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "CNTN4-AS2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "CNTN4-AS2-001"; exon_number 3; exon_id "ENSE00001664369.1"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000156185.2"; havana_transcript "OTTHUMT00000343338.2"; 440chr3 HAVANA gene 3080717 3102829 . - . gene_id "ENSG00000237990.2"; transcript_id "ENSG00000237990.2"; gene_type "antisense"; gene_status "NOVEL"; gene_name "CNTN4-AS1"; transcript_type "antisense"; transcript_status "NOVEL"; transcript_name "CNTN4-AS1"; level 2; havana_gene "OTTHUMG00000154875.3"; 441chr3 HAVANA transcript 3080717 3102829 . - . gene_id "ENSG00000237990.2"; transcript_id "ENST00000442749.2"; gene_type "antisense"; gene_status "NOVEL"; gene_name "CNTN4-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "CNTN4-AS1-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000154875.3"; havana_transcript "OTTHUMT00000337448.3"; 442chr3 HAVANA exon 3102751 3102829 . - . gene_id "ENSG00000237990.2"; transcript_id "ENST00000442749.2"; gene_type "antisense"; gene_status "NOVEL"; gene_name "CNTN4-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "CNTN4-AS1-001"; exon_number 1; exon_id "ENSE00001798518.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000154875.3"; havana_transcript "OTTHUMT00000337448.3"; 443chr3 HAVANA exon 3084597 3084697 . - . gene_id "ENSG00000237990.2"; transcript_id "ENST00000442749.2"; gene_type "antisense"; gene_status "NOVEL"; gene_name "CNTN4-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "CNTN4-AS1-001"; exon_number 2; exon_id "ENSE00001657739.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000154875.3"; havana_transcript "OTTHUMT00000337448.3"; 444chr3 HAVANA exon 3082729 3082838 . - . gene_id "ENSG00000237990.2"; transcript_id "ENST00000442749.2"; gene_type "antisense"; gene_status "NOVEL"; gene_name "CNTN4-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "CNTN4-AS1-001"; exon_number 3; exon_id "ENSE00001803308.1"; level 2; tag "basic"; havana_gene "OTTHUMG00000154875.3"; havana_transcript "OTTHUMT00000337448.3"; 445chr3 HAVANA exon 3080717 3082066 . - . gene_id "ENSG00000237990.2"; transcript_id "ENST00000442749.2"; gene_type "antisense"; gene_status "NOVEL"; gene_name "CNTN4-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "CNTN4-AS1-001"; exon_number 4; exon_id "ENSE00001747179.2"; level 2; tag "basic"; havana_gene "OTTHUMG00000154875.3"; havana_transcript "OTTHUMT00000337448.3"; 446