1 /* I/O of multiple alignment files in Stockholm/Pfam format
2  */
3 #ifndef eslMSAFILE_STOCKHOLM_INCLUDED
4 #define eslMSAFILE_STOCKHOLM_INCLUDED
5 #include "esl_config.h"
6 
7 #include <stdio.h>
8 
9 #include <esl_msafile.h>
10 
11 extern int esl_msafile_stockholm_SetInmap     (ESL_MSAFILE *afp);
12 extern int esl_msafile_stockholm_GuessAlphabet(ESL_MSAFILE *afp, int *ret_type);
13 extern int esl_msafile_stockholm_Read         (ESL_MSAFILE *afp, ESL_MSA **ret_msa);
14 extern int esl_msafile_stockholm_Write        (FILE *fp, const ESL_MSA *msa, int fmt);
15 
16 #endif /*eslMSAFILE_STOCKHOLM_INCLUDED*/
17 
18