1 /* RNA secondary structure markup in WUSS notation. 2 */ 3 #ifndef eslWUSS_INCLUDED 4 #define eslWUSS_INCLUDED 5 #include "esl_config.h" 6 7 extern int esl_wuss2ct(char *ss, int len, int *ct); 8 extern int esl_ct2wuss(int *ct, int n, char *ss); 9 extern int esl_ct2simplewuss(int *ct, int n, char *ss); 10 extern int esl_wuss2kh(char *ss, char *kh); 11 extern int esl_kh2wuss(char *kh, char *ss); 12 extern int esl_wuss_full(char *oldss, char *newss); 13 extern int esl_wuss_nopseudo(char *ss1, char *ss2); 14 extern int esl_wuss_reverse(char *ss, char *new); 15 16 #endif /*eslWUSS_INCLUDED*/ 17 18