1 /* RNA secondary structure markup in WUSS notation.
2  */
3 #ifndef eslWUSS_INCLUDED
4 #define eslWUSS_INCLUDED
5 #include "esl_config.h"
6 
7 extern int esl_wuss2ct(char *ss, int len, int *ct);
8 extern int esl_ct2wuss(int *ct, int n, char *ss);
9 extern int esl_ct2simplewuss(int *ct, int n, char *ss);
10 extern int esl_wuss2kh(char *ss, char *kh);
11 extern int esl_kh2wuss(char *kh, char *ss);
12 extern int esl_wuss_full(char *oldss, char *newss);
13 extern int esl_wuss_nopseudo(char *ss1, char *ss2);
14 extern int esl_wuss_reverse(char *ss, char *new);
15 
16 #endif /*eslWUSS_INCLUDED*/
17 
18