sequence/unit_test/combined_with_omission.asn

Seq-annot ::= {
  data ftable {
    {
      data gene {
        locus "SLC37A1",
        desc "solute carrier family 37 member 1",
        syn {
          "G3PP"
        }
      },
      location int {
        from 914182,
        to 995990,
        strand plus,
        id other {
          accession "NT_011515",
          version 12
        }
      },
      dbxref {
        {
          db "GeneID",
          tag id 54020
        },
        {
          db "HGNC",
          tag str "HGNC:11024"
        },
        {
          db "HPRD",
          tag id 10479
        },
        {
          db "MIM",
          tag id 608094
        }
      }
    },
    {
      data cdregion {
        code {
          id 1
        }
      },
      product whole gi 49619231,
      location packed-int {
        {
          from 933005,
          to 933060,
          strand plus,
          id other {
            accession "NT_011515",
            version 12
          }
        },
        {
          from 940326,
          to 940407,
          strand plus,
          id other {
            accession "NT_011515",
            version 12
          }
        },
        {
          from 949248,
          to 949380,
          strand plus,
          id other {
            accession "NT_011515",
            version 12
          }
        },
        {
          from 950022,
          to 950100,
          strand plus,
          id other {
            accession "NT_011515",
            version 12
          }
        },
        {
          from 954062,
          to 954197,
          strand plus,
          id other {
            accession "NT_011515",
            version 12
          }
        },
        {
          from 956954,
          to 957030,
          strand plus,
          id other {
            accession "NT_011515",
            version 12
          }
        },
        {
          from 957986,
          to 958152,
          strand plus,
          id other {
            accession "NT_011515",
            version 12
          }
        },
        {
          from 961653,
          to 961690,
          strand plus,
          id other {
            accession "NT_011515",
            version 12
          }
        },
        {
          from 968612,
          to 968692,
          strand plus,
          id other {
            accession "NT_011515",
            version 12
          }
        },
        {
          from 973508,
          to 973639,
          strand plus,
          id other {
            accession "NT_011515",
            version 12
          }
        },
        {
          from 976628,
          to 976718,
          strand plus,
          id other {
            accession "NT_011515",
            version 12
          }
        },
        {
          from 978365,
          to 978427,
          strand plus,
          id other {
            accession "NT_011515",
            version 12
          }
        },
        {
          from 979258,
          to 979343,
          strand plus,
          id other {
            accession "NT_011515",
            version 12
          }
        },
        {
          from 980377,
          to 980425,
          strand plus,
          id other {
            accession "NT_011515",
            version 12
          }
        },
        {
          from 981535,
          to 981608,
          strand plus,
          id other {
            accession "NT_011515",
            version 12
          }
        },
        {
          from 982910,
          to 982988,
          strand plus,
          id other {
            accession "NT_011515",
            version 12
          }
        },
        {
          from 989368,
          to 989465,
          strand plus,
          id other {
            accession "NT_011515",
            version 12
          }
        },
        {
          from 994286,
          to 994350,
          strand plus,
          id other {
            accession "NT_011515",
            version 12
          }
        },
        {
          from 994895,
          to 994910,
          strand plus,
          id other {
            accession "NT_011515",
            version 12
          }
        }
      },
      xref {
        {
          data prot {
            name {
              "glucose-6-phosphate exchanger SLC37A1"
            }
          }
        }
      },
      dbxref {
        {
          db "CCDS",
          tag str "CCDS13689.1"
        }
      }
    },
    {
      data gene {
        locus "COL18A1",
        desc "collagen, type XVIII, alpha 1",
        syn {
          "KNO",
          "KNO1",
          "KS"
        }
      },
      partial TRUE,
      location int {
        from 3819537,
        to 3928074,
        strand plus,
        id gi 224514634,
        fuzz-from lim lt
      },
      dbxref {
        {
          db "GeneID",
          tag id 80781
        },
        {
          db "HGNC",
          tag str "HGNC:2195"
        },
        {
          db "MIM",
          tag id 120328
        }
      }
    },
    {
      data rna {
        type mRNA,
        ext name "collagen, type XVIII, alpha 1, transcript variant 2"
      },
      except TRUE,
      comment "The RefSeq transcript has 1 non-frameshifting indel compared to
 this genomic sequence",
      product whole gi 110611232,
      location packed-int {
        {
          from 3819537,
          to 3819596,
          strand plus,
          id gi 224514634
        },
        {
          from 3819734,
          to 3819828,
          strand plus,
          id gi 224514634
        },
        {
          from 3882596,
          to 3883140,
          strand plus,
          id gi 224514634
        },
        {
          from 3888249,
          to 3888335,
          strand plus,
          id gi 224514634
        },
        {
          from 3889830,
          to 3889889,
          strand plus,
          id gi 224514634
        },
        {
          from 3890705,
          to 3890834,
          strand plus,
          id gi 224514634
        },
        {
          from 3891765,
          to 3891841,
          strand plus,
          id gi 224514634
        },
        {
          from 3892104,
          to 3892319,
          strand plus,
          id gi 224514634
        },
        {
          from 3892681,
          to 3892707,
          strand plus,
          id gi 224514634
        },
        {
          from 3894256,
          to 3894318,
          strand plus,
          id gi 224514634
        },
        {
          from 3894424,
          to 3894510,
          strand plus,
          id gi 224514634
        },
        {
          from 3894821,
          to 3894874,
          strand plus,
          id gi 224514634
        },
        {
          from 3895054,
          to 3895212,
          strand plus,
          id gi 224514634
        },
        {
          from 3896317,
          to 3896379,
          strand plus,
          id gi 224514634
        },
        {
          from 3897149,
          to 3897175,
          strand plus,
          id gi 224514634
        },
        {
          from 3901215,
          to 3901346,
          strand plus,
          id gi 224514634
        },
        {
          from 3901801,
          to 3901863,
          strand plus,
          id gi 224514634
        },
        {
          from 3902772,
          to 3902798,
          strand plus,
          id gi 224514634
        },
        {
          from 3903840,
          to 3903875,
          strand plus,
          id gi 224514634
        },
        {
          from 3904629,
          to 3904700,
          strand plus,
          id gi 224514634
        },
        {
          from 3905190,
          to 3905225,
          strand plus,
          id gi 224514634
        },
        {
          from 3905579,
          to 3905668,
          strand plus,
          id gi 224514634
        },
        {
          from 3906889,
          to 3906918,
          strand plus,
          id gi 224514634
        },
        {
          from 3907041,
          to 3907067,
          strand plus,
          id gi 224514634
        },
        {
          from 3907517,
          to 3907579,
          strand plus,
          id gi 224514634
        },
        {
          from 3907855,
          to 3907929,
          strand plus,
          id gi 224514634
        },
        {
          from 3908899,
          to 3908925,
          strand plus,
          id gi 224514634
        },
        {
          from 3909216,
          to 3909269,
          strand plus,
          id gi 224514634
        },
        {
          from 3909712,
          to 3909786,
          strand plus,
          id gi 224514634
        },
        {
          from 3910854,
          to 3910922,
          strand plus,
          id gi 224514634
        },
        {
          from 3911404,
          to 3911446,
          strand plus,
          id gi 224514634
        },
        {
          from 3911953,
          to 3912015,
          strand plus,
          id gi 224514634
        },
        {
          from 3918365,
          to 3918408,
          strand plus,
          id gi 224514634
        },
        {
          from 3918770,
          to 3918910,
          strand plus,
          id gi 224514634
        },
        {
          from 3919488,
          to 3919632,
          strand plus,
          id gi 224514634
        },
        {
          from 3919712,
          to 3919785,
          strand plus,
          id gi 224514634
        },
        {
          from 3920192,
          to 3920320,
          strand plus,
          id gi 224514634
        },
        {
          from 3921915,
          to 3921947,
          strand plus,
          id gi 224514634
        },
        {
          from 3923710,
          to 3923955,
          strand plus,
          id gi 224514634
        },
        {
          from 3924418,
          to 3924615,
          strand plus,
          id gi 224514634
        },
        {
          from 3925465,
          to 3925580,
          strand plus,
          id gi 224514634
        },
        {
          from 3926542,
          to 3928074,
          strand plus,
          id gi 224514634
        }
      },
      qual {
        {
          qual "inference",
          val "similar to RNA sequence, mRNA (same species):RefSeq:NM_130445.2"
        }
      },
      except-text "annotated by transcript or proteomic data"
    },
    {
      data cdregion {
        code {
          id 1
        }
      },
      except TRUE,
      comment "isoform 2 precursor is encoded by transcript variant 2; The
 RefSeq protein has 1 non-frameshifting indel compared to this genomic sequence",
      product whole gi 110611233,
      location packed-int {
        {
          from 3819586,
          to 3819596,
          strand plus,
          id gi 224514634
        },
        {
          from 3819734,
          to 3819828,
          strand plus,
          id gi 224514634
        },
        {
          from 3882596,
          to 3883140,
          strand plus,
          id gi 224514634
        },
        {
          from 3888249,
          to 3888335,
          strand plus,
          id gi 224514634
        },
        {
          from 3889830,
          to 3889889,
          strand plus,
          id gi 224514634
        },
        {
          from 3890705,
          to 3890834,
          strand plus,
          id gi 224514634
        },
        {
          from 3891765,
          to 3891841,
          strand plus,
          id gi 224514634
        },
        {
          from 3892104,
          to 3892319,
          strand plus,
          id gi 224514634
        },
        {
          from 3892681,
          to 3892707,
          strand plus,
          id gi 224514634
        },
        {
          from 3894256,
          to 3894318,
          strand plus,
          id gi 224514634
        },
        {
          from 3894424,
          to 3894510,
          strand plus,
          id gi 224514634
        },
        {
          from 3894821,
          to 3894874,
          strand plus,
          id gi 224514634
        },
        {
          from 3895054,
          to 3895212,
          strand plus,
          id gi 224514634
        },
        {
          from 3896317,
          to 3896379,
          strand plus,
          id gi 224514634
        },
        {
          from 3897149,
          to 3897175,
          strand plus,
          id gi 224514634
        },
        {
          from 3901215,
          to 3901346,
          strand plus,
          id gi 224514634
        },
        {
          from 3901801,
          to 3901863,
          strand plus,
          id gi 224514634
        },
        {
          from 3902772,
          to 3902798,
          strand plus,
          id gi 224514634
        },
        {
          from 3903840,
          to 3903875,
          strand plus,
          id gi 224514634
        },
        {
          from 3904629,
          to 3904700,
          strand plus,
          id gi 224514634
        },
        {
          from 3905190,
          to 3905225,
          strand plus,
          id gi 224514634
        },
        {
          from 3905579,
          to 3905668,
          strand plus,
          id gi 224514634
        },
        {
          from 3906889,
          to 3906918,
          strand plus,
          id gi 224514634
        },
        {
          from 3907041,
          to 3907067,
          strand plus,
          id gi 224514634
        },
        {
          from 3907517,
          to 3907579,
          strand plus,
          id gi 224514634
        },
        {
          from 3907855,
          to 3907929,
          strand plus,
          id gi 224514634
        },
        {
          from 3908899,
          to 3908925,
          strand plus,
          id gi 224514634
        },
        {
          from 3909216,
          to 3909269,
          strand plus,
          id gi 224514634
        },
        {
          from 3909712,
          to 3909786,
          strand plus,
          id gi 224514634
        },
        {
          from 3910854,
          to 3910922,
          strand plus,
          id gi 224514634
        },
        {
          from 3911404,
          to 3911446,
          strand plus,
          id gi 224514634
        },
        {
          from 3911953,
          to 3912015,
          strand plus,
          id gi 224514634
        },
        {
          from 3918365,
          to 3918408,
          strand plus,
          id gi 224514634
        },
        {
          from 3918770,
          to 3918910,
          strand plus,
          id gi 224514634
        },
        {
          from 3919488,
          to 3919632,
          strand plus,
          id gi 224514634
        },
        {
          from 3919712,
          to 3919785,
          strand plus,
          id gi 224514634
        },
        {
          from 3920192,
          to 3920320,
          strand plus,
          id gi 224514634
        },
        {
          from 3921915,
          to 3921947,
          strand plus,
          id gi 224514634
        },
        {
          from 3923710,
          to 3923955,
          strand plus,
          id gi 224514634
        },
        {
          from 3924418,
          to 3924615,
          strand plus,
          id gi 224514634
        },
        {
          from 3925465,
          to 3925580,
          strand plus,
          id gi 224514634
        },
        {
          from 3926542,
          to 3926752,
          strand plus,
          id gi 224514634
        }
      },
      qual {
        {
          qual "inference",
          val "similar to AA sequence (same species):RefSeq:NP_569712.2"
        }
      },
      xref {
        {
          data prot {
            name {
              "collagen alpha-1(XVIII) chain isoform 2 precursor"
            }
          }
        }
      },
      dbxref {
        {
          db "CCDS",
          tag str "CCDS42971.1"
        }
      },
      except-text "annotated by transcript or proteomic data"
    },
    {
      data gene {
        locus "smg6"
      },
      location int {
        from 195029,
        to 196310,
        strand minus,
        id gi 258441149
      }
    },
    {
      data rna {
        type mRNA,
        ext name "partial mRNA for SMG6 homolog nonsense mediated mRNA decay
 factor (C. elegans)cds (smg6 gene)"
      },
      product whole gi 240248230,
      location int {
        from 195029,
        to 196310,
        strand minus,
        id gi 258441149
      }
    },
    {
      data cdregion {
        frame two,
        code {
          id 1
        }
      },
      partial TRUE,
      product whole gi 240248231,
      location int {
        from 195029,
        to 196310,
        strand plus,
        id gi 258441149,
        fuzz-from lim lt,
        fuzz-to lim gt
      },
      xref {
        {
          data prot {
            name {
              "SMG6 homolog nonsense mediated mRNA decay factor (C. elegans)cds"
            }
          }
        }
      },
      dbxref {
        {
          db "GOA",
          tag str "C5J7W9"
        },
        {
          db "UniProtKB/TrEMBL",
          tag str "C5J7W9"
        },
        {
          db "ZFIN",
          tag str "ZDB-GENE-081107-52"
        }
      }
    },
    {
      data rna {
        type mRNA,
        ext name "collagen, type XVIII, alpha 1, transcript variant 2"
      },
      partial TRUE,
      except TRUE,
      comment "The RefSeq transcript has 2 non-frameshifting indels and aligns
 at 99% coverage compared to this genomic sequence",
      product whole gi 110611232,
      location packed-int {
        {
          from 3819582,
          to 3819596,
          strand plus,
          id gi 224514634,
          fuzz-from lim lt
        },
        {
          from 3819734,
          to 3819828,
          strand plus,
          id gi 224514634
        },
        {
          from 3882596,
          to 3883140,
          strand plus,
          id gi 224514634
        },
        {
          from 3888249,
          to 3888335,
          strand plus,
          id gi 224514634
        },
        {
          from 3889830,
          to 3889889,
          strand plus,
          id gi 224514634
        },
        {
          from 3890705,
          to 3890834,
          strand plus,
          id gi 224514634
        },
        {
          from 3891765,
          to 3891841,
          strand plus,
          id gi 224514634
        },
        {
          from 3892104,
          to 3892319,
          strand plus,
          id gi 224514634
        },
        {
          from 3892681,
          to 3892707,
          strand plus,
          id gi 224514634
        },
        {
          from 3894256,
          to 3894318,
          strand plus,
          id gi 224514634
        },
        {
          from 3894424,
          to 3894510,
          strand plus,
          id gi 224514634
        },
        {
          from 3894821,
          to 3894874,
          strand plus,
          id gi 224514634
        },
        {
          from 3895054,
          to 3895212,
          strand plus,
          id gi 224514634
        },
        {
          from 3896317,
          to 3896379,
          strand plus,
          id gi 224514634
        },
        {
          from 3897149,
          to 3897175,
          strand plus,
          id gi 224514634
        },
        {
          from 3901215,
          to 3901346,
          strand plus,
          id gi 224514634
        },
        {
          from 3901801,
          to 3901863,
          strand plus,
          id gi 224514634
        },
        {
          from 3902772,
          to 3902798,
          strand plus,
          id gi 224514634
        },
        {
          from 3903840,
          to 3903875,
          strand plus,
          id gi 224514634
        },
        {
          from 3904629,
          to 3904700,
          strand plus,
          id gi 224514634
        },
        {
          from 3905190,
          to 3905225,
          strand plus,
          id gi 224514634
        },
        {
          from 3905579,
          to 3905668,
          strand plus,
          id gi 224514634
        },
        {
          from 3906889,
          to 3906918,
          strand plus,
          id gi 224514634
        },
        {
          from 3907041,
          to 3907067,
          strand plus,
          id gi 224514634
        },
        {
          from 3907517,
          to 3907579,
          strand plus,
          id gi 224514634
        },
        {
          from 3907855,
          to 3907929,
          strand plus,
          id gi 224514634
        },
        {
          from 3908899,
          to 3908925,
          strand plus,
          id gi 224514634
        },
        {
          from 3909216,
          to 3909269,
          strand plus,
          id gi 224514634
        },
        {
          from 3909712,
          to 3909786,
          strand plus,
          id gi 224514634
        },
        {
          from 3910854,
          to 3910922,
          strand plus,
          id gi 224514634
        },
        {
          from 3911404,
          to 3911446,
          strand plus,
          id gi 224514634
        },
        {
          from 3911953,
          to 3912015,
          strand plus,
          id gi 224514634
        },
        {
          from 3918365,
          to 3918408,
          strand plus,
          id gi 224514634
        },
        {
          from 3918770,
          to 3918910,
          strand plus,
          id gi 224514634
        },
        {
          from 3919488,
          to 3919632,
          strand plus,
          id gi 224514634
        },
        {
          from 3919712,
          to 3919785,
          strand plus,
          id gi 224514634
        },
        {
          from 3920192,
          to 3920320,
          strand plus,
          id gi 224514634
        },
        {
          from 3921915,
          to 3921947,
          strand plus,
          id gi 224514634
        },
        {
          from 3923710,
          to 3923955,
          strand plus,
          id gi 224514634
        },
        {
          from 3924418,
          to 3924615,
          strand plus,
          id gi 224514634
        },
        {
          from 3925465,
          to 3925580,
          strand plus,
          id gi 224514634
        },
        {
          from 3926542,
          to 3928074,
          strand plus,
          id gi 224514634
        }
      },
      qual {
        {
          qual "inference",
          val "similar to RNA sequence, mRNA (same species):RefSeq:NM_130445.2"
        }
      },
      except-text "annotated by transcript or proteomic data"
    },
    {
      data cdregion {
        code {
          id 1
        },
        code-break {
          {
            loc int {
              from 3819583,
              to 3819585,
              strand plus,
              id gi 224514634
            },
            aa ncbieaa 77
          }
        }
      },
      except TRUE,
      comment "isoform 2 precursor is encoded by transcript variant 2; The
 RefSeq protein has 2 substitutions, 2 non-frameshifting indels compared to
 this genomic sequence",
      product whole gi 110611233,
      location packed-int {
        {
          from 3819583,
          to 3819596,
          strand plus,
          id gi 224514634
        },
        {
          from 3819734,
          to 3819828,
          strand plus,
          id gi 224514634
        },
        {
          from 3882596,
          to 3883140,
          strand plus,
          id gi 224514634
        },
        {
          from 3888249,
          to 3888335,
          strand plus,
          id gi 224514634
        },
        {
          from 3889830,
          to 3889889,
          strand plus,
          id gi 224514634
        },
        {
          from 3890705,
          to 3890834,
          strand plus,
          id gi 224514634
        },
        {
          from 3891765,
          to 3891841,
          strand plus,
          id gi 224514634
        },
        {
          from 3892104,
          to 3892319,
          strand plus,
          id gi 224514634
        },
        {
          from 3892681,
          to 3892707,
          strand plus,
          id gi 224514634
        },
        {
          from 3894256,
          to 3894318,
          strand plus,
          id gi 224514634
        },
        {
          from 3894424,
          to 3894510,
          strand plus,
          id gi 224514634
        },
        {
          from 3894821,
          to 3894874,
          strand plus,
          id gi 224514634
        },
        {
          from 3895054,
          to 3895212,
          strand plus,
          id gi 224514634
        },
        {
          from 3896317,
          to 3896379,
          strand plus,
          id gi 224514634
        },
        {
          from 3897149,
          to 3897175,
          strand plus,
          id gi 224514634
        },
        {
          from 3901215,
          to 3901346,
          strand plus,
          id gi 224514634
        },
        {
          from 3901801,
          to 3901863,
          strand plus,
          id gi 224514634
        },
        {
          from 3902772,
          to 3902798,
          strand plus,
          id gi 224514634
        },
        {
          from 3903840,
          to 3903875,
          strand plus,
          id gi 224514634
        },
        {
          from 3904629,
          to 3904700,
          strand plus,
          id gi 224514634
        },
        {
          from 3905190,
          to 3905225,
          strand plus,
          id gi 224514634
        },
        {
          from 3905579,
          to 3905668,
          strand plus,
          id gi 224514634
        },
        {
          from 3906889,
          to 3906918,
          strand plus,
          id gi 224514634
        },
        {
          from 3907041,
          to 3907067,
          strand plus,
          id gi 224514634
        },
        {
          from 3907517,
          to 3907579,
          strand plus,
          id gi 224514634
        },
        {
          from 3907855,
          to 3907929,
          strand plus,
          id gi 224514634
        },
        {
          from 3908899,
          to 3908925,
          strand plus,
          id gi 224514634
        },
        {
          from 3909216,
          to 3909269,
          strand plus,
          id gi 224514634
        },
        {
          from 3909712,
          to 3909786,
          strand plus,
          id gi 224514634
        },
        {
          from 3910854,
          to 3910922,
          strand plus,
          id gi 224514634
        },
        {
          from 3911404,
          to 3911446,
          strand plus,
          id gi 224514634
        },
        {
          from 3911953,
          to 3912015,
          strand plus,
          id gi 224514634
        },
        {
          from 3918365,
          to 3918408,
          strand plus,
          id gi 224514634
        },
        {
          from 3918770,
          to 3918910,
          strand plus,
          id gi 224514634
        },
        {
          from 3919488,
          to 3919632,
          strand plus,
          id gi 224514634
        },
        {
          from 3919712,
          to 3919785,
          strand plus,
          id gi 224514634
        },
        {
          from 3920192,
          to 3920320,
          strand plus,
          id gi 224514634
        },
        {
          from 3921915,
          to 3921947,
          strand plus,
          id gi 224514634
        },
        {
          from 3923710,
          to 3923955,
          strand plus,
          id gi 224514634
        },
        {
          from 3924418,
          to 3924615,
          strand plus,
          id gi 224514634
        },
        {
          from 3925465,
          to 3925580,
          strand plus,
          id gi 224514634
        },
        {
          from 3926542,
          to 3926752,
          strand plus,
          id gi 224514634
        }
      },
      qual {
        {
          qual "inference",
          val "similar to AA sequence (same species):RefSeq:NP_569712.2"
        }
      },
      xref {
        {
          data prot {
            name {
              "collagen alpha-1(XVIII) chain isoform 2 precursor"
            }
          }
        }
      },
      dbxref {
        {
          db "CCDS",
          tag str "CCDS42971.1"
        }
      },
      except-text "annotated by transcript or proteomic data"
    },
    {
      data gene {
        locus "COPG2",
        desc "coatomer protein complex, subunit gamma 2",
        syn {
          "2-COP"
        }
      },
      partial TRUE,
      location int {
        from 68178921,
        to 68386440,
        strand minus,
        id other {
          accession "NT_007933",
          version 15
        }
      },
      dbxref {
        {
          db "GeneID",
          tag id 26958
        },
        {
          db "HGNC",
          tag id 2237
        },
        {
          db "MIM",
          tag id 604355
        }
      }
    },
    {
      data rna {
        type mRNA,
        ext name "coatomer protein complex, subunit gamma 2"
      },
      partial TRUE,
      except TRUE,
      comment "The RefSeq transcript has 17 substitutions, 3 frameshifts, 2
 non-frameshifting indels and aligns at 58% coverage compared to this genomic
 sequence",
      product whole other {
        accession "NM_012133",
        version 4
      },
      location packed-int {
        {
          from 68386314,
          to 68386440,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68385164,
          to 68385216,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68384531,
          to 68384611,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68380649,
          to 68380720,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68370551,
          to 68370630,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68334703,
          to 68334778,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68331257,
          to 68331349,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68329865,
          to 68329951,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68328668,
          to 68328823,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt
        },
        {
          from 68320191,
          to 68320199,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt,
          fuzz-to lim gt
        },
        {
          from 68309996,
          to 68310008,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-to lim gt
        },
        {
          from 68306565,
          to 68306573,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt,
          fuzz-to lim gt
        },
        {
          from 68302047,
          to 68302055,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt,
          fuzz-to lim gt
        },
        {
          from 68288030,
          to 68288038,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-to lim gt
        },
        {
          from 68186540,
          to 68186560,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68185146,
          to 68185170,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt
        },
        {
          from 68181245,
          to 68181362,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-to lim gt
        },
        {
          from 68180368,
          to 68180506,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68179957,
          to 68180055,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68178921,
          to 68179489,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        }
      },
      qual {
        {
          qual "inference",
          val "similar to RNA sequence, mRNA (same species):RefSeq:NM_012133.4"
        }
      },
      except-text "annotated by transcript or proteomic data"
    },
    {
      data cdregion {
        code {
          id 1
        }
      },
      partial TRUE,
      except TRUE,
      comment "The RefSeq protein has 3 frameshifts, 1 non-frameshifting indel
 and aligns at 50% coverage compared to this genomic sequence",
      product whole gi 109134349,
      location packed-int {
        {
          from 68386314,
          to 68386350,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68385164,
          to 68385216,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68384531,
          to 68384611,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68380649,
          to 68380720,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68370551,
          to 68370630,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68334703,
          to 68334778,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68331257,
          to 68331349,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68329865,
          to 68329951,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68328668,
          to 68328823,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt
        },
        {
          from 68320191,
          to 68320199,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt,
          fuzz-to lim gt
        },
        {
          from 68309996,
          to 68310008,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-to lim gt
        },
        {
          from 68306565,
          to 68306573,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt,
          fuzz-to lim gt
        },
        {
          from 68302047,
          to 68302055,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt,
          fuzz-to lim gt
        },
        {
          from 68288030,
          to 68288038,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-to lim gt
        },
        {
          from 68186540,
          to 68186560,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68185146,
          to 68185170,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt
        },
        {
          from 68181245,
          to 68181362,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-to lim gt
        },
        {
          from 68180368,
          to 68180506,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68179957,
          to 68180055,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68179359,
          to 68179489,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        }
      },
      qual {
        {
          qual "inference",
          val "similar to AA sequence (same species):RefSeq:NP_036265.3"
        }
      },
      xref {
        {
          data prot {
            name {
              "coatomer subunit gamma-2"
            }
          }
        }
      },
      except-text "annotated by transcript or proteomic data"
    },
    {
      data rna {
        type mRNA,
        ext name "coatomer protein complex, subunit gamma 2"
      },
      partial TRUE,
      except TRUE,
      comment "The RefSeq transcript has 17 substitutions, 3 frameshifts, 2
 non-frameshifting indels and aligns at 59% coverage compared to this genomic
 sequence",
      product whole other {
        accession "NM_012133",
        version 4
      },
      location packed-int {
        {
          from 68386314,
          to 68386440,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68385164,
          to 68385216,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68384531,
          to 68384611,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68380649,
          to 68380720,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68370551,
          to 68370630,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68334703,
          to 68334778,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68331257,
          to 68331349,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68329865,
          to 68329951,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68328668,
          to 68328823,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt
        },
        {
          from 68320191,
          to 68320199,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt,
          fuzz-to lim gt
        },
        {
          from 68309996,
          to 68310008,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-to lim gt
        },
        {
          from 68306565,
          to 68306573,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt,
          fuzz-to lim gt
        },
        {
          from 68302047,
          to 68302055,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt,
          fuzz-to lim gt
        },
        {
          from 68288030,
          to 68288038,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-to lim gt
        },
        {
          from 68186540,
          to 68186560,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68185146,
          to 68185170,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt
        },
        {
          from 68181245,
          to 68181362,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-to lim gt
        },
        {
          from 68180368,
          to 68180506,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68179957,
          to 68180055,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68178921,
          to 68179489,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        }
      },
      qual {
        {
          qual "inference",
          val "similar to RNA sequence, mRNA (same species):RefSeq:NM_012133.4"
        }
      },
      except-text "annotated by transcript or proteomic data"
    },
    {
      data cdregion {
        code {
          id 1
        }
      },
      partial TRUE,
      except TRUE,
      comment "The RefSeq protein has 3 frameshifts, 1 non-frameshifting indel
 and aligns at 50% coverage compared to this genomic sequence",
      product whole gi 109134349,
      location packed-int {
        {
          from 68386314,
          to 68386350,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68385164,
          to 68385216,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68384531,
          to 68384611,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68380649,
          to 68380720,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68370551,
          to 68370630,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68334703,
          to 68334778,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68331257,
          to 68331349,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68329865,
          to 68329951,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68328668,
          to 68328823,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt
        },
        {
          from 68320191,
          to 68320199,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt,
          fuzz-to lim gt
        },
        {
          from 68309996,
          to 68310008,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-to lim gt
        },
        {
          from 68306565,
          to 68306573,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt,
          fuzz-to lim gt
        },
        {
          from 68302047,
          to 68302055,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt,
          fuzz-to lim gt
        },
        {
          from 68288030,
          to 68288038,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-to lim gt
        },
        {
          from 68186540,
          to 68186560,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68185146,
          to 68185170,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt
        },
        {
          from 68181245,
          to 68181362,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-to lim gt
        },
        {
          from 68180368,
          to 68180506,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68179957,
          to 68180055,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68179359,
          to 68179489,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        }
      },
      qual {
        {
          qual "inference",
          val "similar to AA sequence (same species):RefSeq:NP_036265.3"
        }
      },
      xref {
        {
          data prot {
            name {
              "coatomer subunit gamma-2"
            }
          }
        }
      },
      except-text "annotated by transcript or proteomic data"
    },
    {
      data rna {
        type mRNA,
        ext name "coatomer protein complex, subunit gamma 2"
      },
      partial TRUE,
      except TRUE,
      comment "The RefSeq transcript has 1 non-frameshifting indel and aligns
 at 54% coverage compared to this genomic sequence",
      product whole other {
        accession "NM_012133",
        version 4
      },
      location packed-int {
        {
          from 68386314,
          to 68386440,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68385164,
          to 68385216,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68384531,
          to 68384611,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68380649,
          to 68380720,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68370551,
          to 68370630,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68334703,
          to 68334778,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68331257,
          to 68331349,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68329865,
          to 68329951,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68328668,
          to 68328823,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt
        },
        {
          from 68181245,
          to 68181343,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-to lim gt
        },
        {
          from 68180368,
          to 68180506,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68179958,
          to 68180055,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt
        },
        {
          from 68178921,
          to 68179487,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-to lim gt
        }
      },
      qual {
        {
          qual "inference",
          val "similar to RNA sequence, mRNA (same species):RefSeq:NM_012133.4"
        }
      },
      except-text "annotated by transcript or proteomic data"
    },
    {
      data cdregion {
        code {
          id 1
        }
      },
      partial TRUE,
      except TRUE,
      comment "The RefSeq protein aligns at 45% coverage compared to this
 genomic sequence",
      product whole gi 109134349,
      location packed-int {
        {
          from 68386314,
          to 68386350,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68385164,
          to 68385216,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68384531,
          to 68384611,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68380649,
          to 68380720,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68370551,
          to 68370630,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68334703,
          to 68334778,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68331257,
          to 68331349,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68329865,
          to 68329951,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68328668,
          to 68328823,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt
        },
        {
          from 68181245,
          to 68181343,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-to lim gt
        },
        {
          from 68180368,
          to 68180506,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          }
        },
        {
          from 68179958,
          to 68180055,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-from lim lt
        },
        {
          from 68179359,
          to 68179487,
          strand minus,
          id other {
            accession "NT_007933",
            version 15
          },
          fuzz-to lim gt
        }
      },
      qual {
        {
          qual "inference",
          val "similar to AA sequence (same species):RefSeq:NP_036265.3"
        }
      },
      xref {
        {
          data prot {
            name {
              "coatomer subunit gamma-2"
            }
          }
        }
      },
      except-text "annotated by transcript or proteomic data"
    }
  }
}