| .. | | 25-Mar-2021 | - |
| across_genes.gtf | H A D | 04-Sep-2019 | 607 | 8 | 8 |
| across_genes_r1.bam.ora | H A D | 04-Sep-2019 | 192 | 9 | 8 |
| across_genes_r1.sam | H A D | 04-Sep-2019 | 391 | 5 | 4 |
| across_genes_r1.sam.ora | H A D | 04-Sep-2019 | 192 | 9 | 8 |
| across_genes_r2.bam.ora | H A D | 04-Sep-2019 | 192 | 9 | 8 |
| across_genes_r2.sam | H A D | 04-Sep-2019 | 385 | 4 | 4 |
| across_genes_r2.sam.ora | H A D | 04-Sep-2019 | 192 | 9 | 8 |
| across_intron.gtf | H A D | 04-Sep-2019 | 226 | 4 | 3 |
| across_intron_r1.bam.ora | H A D | 04-Sep-2019 | 70 | 4 | 3 |
| across_intron_r1.sam | H A D | 04-Sep-2019 | 406 | 6 | 5 |
| across_intron_r1.sam.ora | H A D | 04-Sep-2019 | 70 | 4 | 3 |
| across_intron_r2.bam.ora | H A D | 04-Sep-2019 | 70 | 4 | 3 |
| across_intron_r2.sam | H A D | 04-Sep-2019 | 407 | 5 | 5 |
| across_intron_r2.sam.ora | H A D | 04-Sep-2019 | 70 | 4 | 3 |
| compare.sh | H A D | 04-Sep-2019 | 1.5 KiB | 35 | 27 |
| corner-BINS.SAF | H A D | 04-Sep-2019 | 172 | 8 | 7 |
| corner-BINS.sam | H A D | 04-Sep-2019 | 2.1 KiB | 12 | 11 |
| corner-BothEnds.ora | H A D | 04-Sep-2019 | 104 | 9 | 8 |
| corner-Chimeric.ora | H A D | 04-Sep-2019 | 104 | 9 | 8 |
| corner-DoNotSort.ora | H A D | 04-Sep-2019 | 104 | 9 | 8 |
| corner-EXON-ONLY.ora | H A D | 04-Sep-2019 | 149 | 10 | 9 |
| corner-Extend3.ora | H A D | 04-Sep-2019 | 104 | 9 | 8 |
| corner-Extend5.ora | H A D | 04-Sep-2019 | 104 | 9 | 8 |
| corner-Fraction.ora | H A D | 04-Sep-2019 | 107 | 9 | 8 |
| corner-INDEL.ora | H A D | 04-Sep-2019 | 271 | 11 | 10 |
| corner-INDEL.sam | H A D | 04-Sep-2019 | 4.3 KiB | 20 | 19 |
| corner-IgnoreDup.ora | H A D | 04-Sep-2019 | 103 | 9 | 8 |
| corner-JUNC-ONLY.ora | H A D | 04-Sep-2019 | 944 | 26 | 25 |
| corner-JUNC.ora | H A D | 04-Sep-2019 | 274 | 11 | 10 |
| corner-JUNC.sam | H A D | 04-Sep-2019 | 10.6 KiB | 41 | 40 |
| corner-Jcounts-FA.ora | H A D | 04-Sep-2019 | 104 | 9 | 8 |
| corner-Jcounts-FA.ora.jcounts | H A D | 04-Sep-2019 | 11.2 KiB | 278 | 277 |
| corner-Jcounts.ora | H A D | 04-Sep-2019 | 104 | 9 | 8 |
| corner-Jcounts.ora.jcounts | H A D | 25-Mar-2021 | 11.7 KiB | 277 | 276 |
| corner-LargestOverlap.ora | H A D | 04-Sep-2019 | 104 | 9 | 8 |
| corner-MaxOPs.ora | H A D | 04-Sep-2019 | 104 | 9 | 8 |
| corner-MinMAPQ.ora | H A D | 04-Sep-2019 | 104 | 9 | 8 |
| corner-MinOverlap.ora | H A D | 04-Sep-2019 | 121 | 9 | 8 |
| corner-MultiMapping.ora | H A D | 04-Sep-2019 | 104 | 9 | 8 |
| corner-NH-PM.ora | H A D | 04-Sep-2019 | 252 | 10 | 9 |
| corner-NH.ora | H A D | 04-Sep-2019 | 265 | 11 | 10 |
| corner-NH.sam | H A D | 04-Sep-2019 | 26.9 KiB | 106 | 105 |
| corner-ONEEND-BOTH.ora | H A D | 04-Sep-2019 | 283 | 11 | 10 |
| corner-ONEEND.ora | H A D | 04-Sep-2019 | 278 | 11 | 10 |
| corner-ONEEND.sam | H A D | 04-Sep-2019 | 9.5 KiB | 46 | 45 |
| corner-PEdist.ora | H A D | 04-Sep-2019 | 104 | 9 | 8 |
| corner-Read2Pos3.ora | H A D | 04-Sep-2019 | 104 | 9 | 8 |
| corner-Read2Pos5.ora | H A D | 04-Sep-2019 | 104 | 9 | 8 |
| corner-fractions.SAF | H A D | 04-Sep-2019 | 122 | 7 | 6 |
| corner-fractions.ora | H A D | 04-Sep-2019 | 24 | 4 | 3 |
| corner-fractions.sam | H A D | 04-Sep-2019 | 304 | 8 | 7 |
| corner-reduction.sam | H A D | 04-Sep-2019 | 10.7 KiB | 41 | 40 |
| intron_between.bam.ora | H A D | 04-Sep-2019 | 48 | 3 | 2 |
| intron_between.gtf | H A D | 04-Sep-2019 | 151 | 2 | 2 |
| intron_between.sam | H A D | 04-Sep-2019 | 379 | 4 | 4 |
| intron_between.sam.ora | H A D | 04-Sep-2019 | 48 | 3 | 2 |
| intron_between_nointron.bam.ora | H A D | 04-Sep-2019 | 48 | 3 | 2 |
| intron_between_nointron.sam | H A D | 04-Sep-2019 | 374 | 4 | 4 |
| intron_between_nointron.sam.ora | H A D | 04-Sep-2019 | 48 | 3 | 2 |
| test-chralias.GTF | H A D | 04-Sep-2019 | 2.6 KiB | 24 | 23 |
| test-chralias.SAF | H A D | 04-Sep-2019 | 907 | 28 | 27 |
| test-chralias.ora | H A D | 04-Sep-2019 | 334 | 11 | 10 |
| test-chralias.sam | H A D | 04-Sep-2019 | 361.3 KiB | 1,206 | 1,205 |
| test-chrname.SAF | H A D | 04-Sep-2019 | 898 | 28 | 27 |
| test-chrname.ora | H A D | 04-Sep-2019 | 301 | 11 | 10 |
| test-chrname.sam | H A D | 04-Sep-2019 | 365 KiB | 1,206 | 1,205 |
| test-dup.sam | H A D | 04-Sep-2019 | 309.2 KiB | 1,004 | 1,003 |
| test-fracOverlap.ora | H A D | 04-Sep-2019 | 43 | 5 | 4 |
| test-fracOverlap.sam | H A D | 04-Sep-2019 | 218 | 6 | 5 |
| test-junc.sam | H A D | 04-Sep-2019 | 1.4 MiB | 5,017 | 5,016 |
| test-minimum-35ext.ora | H A D | 04-Sep-2019 | 292 | 10 | 9 |
| test-minimum-3ext.ora | H A D | 04-Sep-2019 | 290 | 10 | 9 |
| test-minimum-5ext.ora | H A D | 04-Sep-2019 | 290 | 10 | 9 |
| test-minimum-5reduce.ora | H A D | 04-Sep-2019 | 847 | 10 | 9 |
| test-minimum-FL.ora | H A D | 04-Sep-2019 | 936 | 27 | 26 |
| test-minimum-O.ora | H A D | 04-Sep-2019 | 282 | 11 | 10 |
| test-minimum-PE.ora | H A D | 04-Sep-2019 | 278 | 11 | 10 |
| test-minimum-SE.ora | H A D | 04-Sep-2019 | 275 | 11 | 10 |
| test-minimum-STR.ora | H A D | 04-Sep-2019 | 284 | 11 | 10 |
| test-minimum-UNSTR.ora | H A D | 04-Sep-2019 | 285 | 11 | 10 |
| test-minimum-dup.ora | H A D | 04-Sep-2019 | 278 | 10 | 9 |
| test-minimum.GTF | H A D | 04-Sep-2019 | 2 KiB | 24 | 23 |
| test-minimum.SAF | H A D | 04-Sep-2019 | 756 | 25 | 24 |
| test-minimum.ora | H A D | 04-Sep-2019 | 275 | 11 | 10 |
| test-minimum.sam | H A D | 04-Sep-2019 | 308.8 KiB | 1,004 | 1,003 |