1 /**
2  * UGENE - Integrated Bioinformatics Tools.
3  * Copyright (C) 2008-2021 UniPro <ugene@unipro.ru>
4  * http://ugene.net
5  *
6  * This program is free software; you can redistribute it and/or
7  * modify it under the terms of the GNU General Public License
8  * as published by the Free Software Foundation; either version 2
9  * of the License, or (at your option) any later version.
10  *
11  * This program is distributed in the hope that it will be useful,
12  * but WITHOUT ANY WARRANTY; without even the implied warranty of
13  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
14  * GNU General Public License for more details.
15  *
16  * You should have received a copy of the GNU General Public License
17  * along with this program; if not, write to the Free Software
18  * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston,
19  * MA 02110-1301, USA.
20  */
21 
22 #ifndef _U2_MSA_EDITOR_WGT_H_
23 #define _U2_MSA_EDITOR_WGT_H_
24 
25 #include "view_rendering/MaEditorWgt.h"
26 
27 namespace U2 {
28 
29 class GObjectViewWindow;
30 class MSADistanceMatrix;
31 class MSAEditor;
32 class MsaEditorAlignmentDependentWidget;
33 class MSAEditorMultiTreeViewer;
34 class MsaEditorSimilarityColumn;
35 class MSAEditorTreeViewer;
36 class SimilarityStatisticsSettings;
37 
38 class U2VIEW_EXPORT MsaEditorWgt : public MaEditorWgt {
39     Q_OBJECT
40     // todo: make public accessors:
41     friend class MSAEditorTreeViewer;
42     friend class MsaEditorSimilarityColumn;
43 
44 public:
45     MsaEditorWgt(MSAEditor *editor);
46 
47     MSAEditor *getEditor() const;
48 
49     MSAEditorSequenceArea *getSequenceArea() const;
50 
51     void createDistanceColumn(MSADistanceMatrix *matrix);
52 
53     void addTreeView(GObjectViewWindow *treeView);
54 
55     void setSimilaritySettings(const SimilarityStatisticsSettings *settings);
56 
57     void refreshSimilarityColumn();
58 
59     void showSimilarity();
60     void hideSimilarity();
61 
62     const MsaEditorAlignmentDependentWidget *getSimilarityWidget();
63 
64     MSAEditorTreeViewer *getCurrentTree() const;
65 
66     MSAEditorMultiTreeViewer *getMultiTreeViewer();
67 
68 private slots:
69     void sl_onTabsCountChanged(int tabsCount);
70 signals:
71     void si_showTreeOP();
72     void si_hideTreeOP();
73 
74 protected:
75     void initSeqArea(GScrollBar *shBar, GScrollBar *cvBar);
76     void initOverviewArea();
77     void initNameList(QScrollBar *nhBar);
78     void initConsensusArea();
79     void initStatusBar();
80 
81 private:
82     MsaEditorSimilarityColumn *dataList;
83     MSAEditorMultiTreeViewer *multiTreeViewer;
84     MsaEditorAlignmentDependentWidget *similarityStatistics;
85     MSAEditorTreeViewer *treeViewer;
86 };
87 
88 }  // namespace U2
89 
90 #endif  // _U2_MSA_EDITOR_WGT_H_
91