1<multi-test> 2 <remove-temp-dir url="genome_aligner_3"/> 3 <create-temp-dir url="genome_aligner_3"/> 4 <run-cmdline 5 task="!common_data_dir!genome_aligner/workflow/genome-aligner.uwl" 6 in="!common_data_dir!reads/e_coli_1000.fa" 7 out-dir="!tmp_data_dir!genome_aligner_3" 8 ref="!common_data_dir!bwa/index/ecoli.fa" 9 abs-mis-enabled="false" 10 abs-mis="0" 11 percent-mis="5" 12 rev-compl="true" 13 best-mode="false" 14 omit-count="10" 15 /> 16 <compare-sam-by-length file1="genome_aligner_3/genome_aligner/out.sam" file2="genome_aligner/workflow/data_3.sam"/> 17 <remove-temp-dir url="genome_aligner_3"/> 18</multi-test> 19