1a score=0 2s hg18.chr11 93103792 112 - 134452384 CCAAGGCUUUUAGAAUGCAGUUUCUCAUUUGCUGUGGACAUGACCAUAAAAA-AAUUUC--CCAGUAGGUUUU-C-UAUCUGCUACUUUGCUAGCAAUCAGCUUAUUGGGAACAGUU 3s rn4.chr8 116925096 113 + 129041809 CCAAGGCUUUUAGAAUGCAGUUUCUCAUUUGCUGUGGACAUGACCAUAAAGAAAAAUUC--CCAUUAGGUUUU-C-CAUAUGCUACUUGAGUAGCACUUAACCUGUUGGGAACAUUU 4s bosTau2.chr29 547350 114 - 45822729 CCAAGGCUUUUAGAACGCAGUUUCUAAUUUGCUGUGGACAUGACCGUAAAACAAAAUCC--CAACUAGGUUUUUC-UUCCUGCUACUUUGUUAGCAUACAGCCUGUUGGGAACAUUU 5s dasNov1.scaffold_2894 17074 112 - 85457 CCAAGGCUUUUAGAAUGCAGUUUCUGAUUUGCUGUGGAGUUGACCAUAAAAAAAACUCU--CCACUGGGCUUU-C-U-UUUGCUACCUUGCUAGCCUUCAGCCUGUUGGGAACAUUC 6s echTel1.scaffold_316886 80434 112 + 105239 CCAAGGCUUUUAGAAUGUGGUUUCUGAUUUGCUGUGGACAUGACCAUAG--ACAAUUUC--CCAGGAGGUUUU-UGUUUUUGCUACCUUGCUAGCAUAUAACCGAUUGGGGACAUUG 7s monDom4.chr4 174693365 113 + 430141050 CCAAGGCUUUUAGAAUGCAGUUUCUGAUU-GCUGUGGACAUGACCAUAAAAAAAAUUAUAUCCAACAGGUUU--A-UAUUUGCUAUCUUACUAGCAUCUAACCUGUUGGGAACAGUU 8 9