1MERGE_NAME FASTQ1 FASTQ2 RG 2sm1 results/testBam2FastQReadNameRGi.rg1_interleaved.fastq results/testBam2FastQReadNameRGi.rg1_interleaved.fastq @RG ID:rg1 SM:sm1 3sm1 results/testBam2FastQReadNameRGi.rg1.fastq . @RG ID:rg1 SM:sm1 4sm2 results/testBam2FastQReadNameRGi.rg2_interleaved.fastq results/testBam2FastQReadNameRGi.rg2_interleaved.fastq @RG ID:rg2 PL:ILLUMINA LB:lib2 SM:sm2 CN:cn2 5results/testBam2FastQReadNameRGi results/testBam2FastQReadNameRGi_interleaved.fastq results/testBam2FastQReadNameRGi_interleaved.fastq . 6