1\" Generated by c2man from bl_fastx_qual.c
2.TH bl_fastx_qual 3
3
4.SH LIBRARY
5\" Indicate #includes, library name, -L and -l flags
6.nf
7.na
8#include <biolibc/fastx.h>
9-lbiolibc -lxtend
10.ad
11.fi
12
13\" Convention:
14\" Underline anything that is typed verbatim - commands, etc.
15.SH SYNOPSIS
16.PP
17char    *bl_fastx_qual(bl_fastx_t *record)
18
19.SH ARGUMENTS
20.nf
21.na
22record  Pointer to the bl_fastx_t structure
23.ad
24.fi
25
26.SH DESCRIPTION
27
28Return a pointer to the qual string of a FASTQ
29record.  The record must be initialized with bl_fastx_init(3)
30and populated by bl_fastx_read(3) or other means.  If the format
31if the fastx stream is FASTA, a warning is generated and NULL
32is returned.  Previously used
33variables may be reused to process another record in the same
34format (FASTA or FASTQ) or reinitialized by bl_fastx_free(3);
35
36.SH RETURN VALUES
37
38Pointer to the qual string
39
40.SH EXAMPLES
41.nf
42.na
43
44bl_fastx_t  record = BL_FASTX_INIT;
45
46bl_fastx_init(stdin, &record);
47bl_fastx_read(stdin, &record);
48printf("Qual string = %sn", bl_fastx_qual(&record));
49bl_fastx_free(&record);
50.ad
51.fi
52
53.SH SEE ALSO
54
55bl_fastx_init(3), bl_fastx_read(3), bl_fastx_write(3),
56bl_fastx_free(3)
57
58