1# Makefile.in generated by automake 1.12.2 from Makefile.am.
2# test/Makefile.  Generated from Makefile.in by configure.
3
4# Copyright (C) 1994-2012 Free Software Foundation, Inc.
5
6# This Makefile.in is free software; the Free Software Foundation
7# gives unlimited permission to copy and/or distribute it,
8# with or without modifications, as long as this notice is preserved.
9
10# This program is distributed in the hope that it will be useful,
11# but WITHOUT ANY WARRANTY, to the extent permitted by law; without
12# even the implied warranty of MERCHANTABILITY or FITNESS FOR A
13# PARTICULAR PURPOSE.
14
15
16
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118ACLOCAL = ${SHELL} /data/scratch/embossdist/missing --run aclocal-1.12
119AJAX_FIXED_ROOT = \"/data/scratch/embossdist/emboss\"
120AJAX_SYSTEM = \"Linux\"
121AMTAR = $${TAR-tar}
122ANT = /usr/bin/ant
123AR = ar
124AUTOCONF = ${SHELL} /data/scratch/embossdist/missing --run autoconf
125AUTOHEADER = ${SHELL} /data/scratch/embossdist/missing --run autoheader
126AUTOMAKE = ${SHELL} /data/scratch/embossdist/missing --run automake-1.12
127AWK = gawk
128AXIS2C_CFLAGS =
129AXIS2C_CPPFLAGS =
130AXIS2C_LDFLAGS =
131AXIS2C_LIBS =
132CC = gcc
133CCDEPMODE = depmode=gcc3
134CFLAGS =   -O2
135CPP = gcc -E
136CPPFLAGS =  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64
137CXX = g++
138CXXCPP = g++ -E
139CXXDEPMODE = depmode=gcc3
140CXXFLAGS = -g -O2
141CYGPATH_W = echo
142DEFS = -DHAVE_CONFIG_H
143DEPDIR = .deps
144DEVWARN_CFLAGS =
145DLLTOOL = false
146DSYMUTIL =
147DUMPBIN =
148ECHO_C =
149ECHO_N = -n
150ECHO_T =
151EGREP = /usr/bin/grep -E
152EMBOSS_TOP = /data/scratch/embossdist
153EXEEXT =
154FGREP = /usr/bin/grep -F
155GREP = /usr/bin/grep
156HAVE_MEMMOVE =
157HAVE_STRERROR =
158INSTALL = /usr/bin/install -c
159INSTALL_DATA = ${INSTALL} -m 644
160INSTALL_PROGRAM = ${INSTALL}
161INSTALL_SCRIPT = ${INSTALL}
162INSTALL_STRIP_PROGRAM = $(install_sh) -c -s
163JAR = /usr/bin/jar
164JAVA = /usr/bin/java
165JAVAC = /usr/bin/javac
166JAVA_CFLAGS =
167JAVA_CPPFLAGS = -I/usr/lib/jvm/java/include -I/usr/lib/jvm/java/include/linux -DNO_AUTH
168JAVA_LDFLAGS =
169LD = /usr/bin/ld -m elf_x86_64
170LDFLAGS =
171LIBOBJS =
172LIBS = -lm  -lhpdf -lgd -lpng -lz -lm
173LIBTOOL = $(SHELL) $(top_builddir)/libtool
174LIPO =
175LN_S = ln -s
176LTLIBOBJS =
177MAKEINFO = ${SHELL} /data/scratch/embossdist/missing --run makeinfo
178MANIFEST_TOOL = :
179MKDIR_P = /usr/bin/mkdir -p
180MYSQL_CFLAGS = -I/usr/include/mysql -g -pipe -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4  -m64 -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -fno-strict-aliasing -fwrapv -fPIC  -fPIC -g -static-libgcc -fno-omit-frame-pointer -fno-strict-aliasing -DMY_PTHREAD_FASTMUTEX=1
181MYSQL_CONFIG = /usr/bin/mysql_config
182MYSQL_CPPFLAGS = -I/usr/include/mysql
183MYSQL_LDFLAGS = -L/usr/lib64/mysql -lmysqlclient -lpthread -lz -lm -lrt -lssl -lcrypto -ldl
184MYSQL_VERSION = 5.5.32
185NM = /usr/bin/nm -B
186NMEDIT =
187OBJDUMP = objdump
188OBJEXT = o
189OTOOL =
190OTOOL64 =
191PACKAGE = EMBOSS
192PACKAGE_BUGREPORT = emboss-bug@emboss.open-bio.org
193PACKAGE_NAME = EMBOSS
194PACKAGE_STRING = EMBOSS 6.6.0
195PACKAGE_TARNAME = EMBOSS
196PACKAGE_URL = http://emboss.open-bio.org/
197PACKAGE_VERSION = 6.6.0
198PATH_SEPARATOR = :
199PCRE_DATE = 11-Apr-2009
200PCRE_LIB_VERSION = 0:1:0
201PCRE_MAJOR = 7
202PCRE_MINOR = 9
203PCRE_POSIXLIB_VERSION = 0:0:0
204PCRE_VERSION = 7.9
205PKG_CONFIG = /usr/bin/pkg-config
206PKG_CONFIG_LIBDIR =
207PKG_CONFIG_PATH =
208POSIX_MALLOC_THRESHOLD = -DPOSIX_MALLOC_THRESHOLD=10
209POSTGRESQL_CFLAGS = -I/usr/include
210POSTGRESQL_CONFIG = /usr/bin/pg_config
211POSTGRESQL_CPPFLAGS = -I/usr/include
212POSTGRESQL_LDFLAGS = -L/usr/lib64 -lpq
213POSTGRESQL_VERSION = 9.2.4
214RANLIB = ranlib
215SED = /usr/bin/sed
216SET_MAKE =
217SHELL = /bin/sh
218STRIP = strip
219VERSION = 6.6.0
220WARN_CFLAGS =
221XLIB =  -lX11
222XMKMF =
223X_CFLAGS =
224X_EXTRA_LIBS =
225X_LIBS =
226X_PRE_LIBS =  -lSM -lICE
227abs_builddir = /data/scratch/embossdist/test
228abs_srcdir = /data/scratch/embossdist/test
229abs_top_builddir = /data/scratch/embossdist
230abs_top_srcdir = /data/scratch/embossdist
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233ac_ct_CXX = g++
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313$(am__aclocal_m4_deps):
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315mostlyclean-libtool:
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318clean-libtool:
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321# This directory's subdirectories are mostly independent; you can cd
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425GTAGS:
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430cscopelist: cscopelist-recursive $(HEADERS) $(SOURCES) $(LISP)
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444distclean-tags:
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447distdir: $(DISTFILES)
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522	  $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
523	    install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
524	    "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'" install; \
525	fi
526mostlyclean-generic:
527
528clean-generic:
529
530distclean-generic:
531	-test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
532	-test . = "$(srcdir)" || test -z "$(CONFIG_CLEAN_VPATH_FILES)" || rm -f $(CONFIG_CLEAN_VPATH_FILES)
533
534maintainer-clean-generic:
535	@echo "This command is intended for maintainers to use"
536	@echo "it deletes files that may require special tools to rebuild."
537clean: clean-recursive
538
539clean-am: clean-generic clean-libtool mostlyclean-am
540
541distclean: distclean-recursive
542	-rm -f Makefile
543distclean-am: clean-am distclean-generic distclean-tags
544
545dvi: dvi-recursive
546
547dvi-am:
548
549html: html-recursive
550
551html-am:
552
553info: info-recursive
554
555info-am:
556
557install-data-am:
558
559install-dvi: install-dvi-recursive
560
561install-dvi-am:
562
563install-exec-am:
564
565install-html: install-html-recursive
566
567install-html-am:
568
569install-info: install-info-recursive
570
571install-info-am:
572
573install-man:
574
575install-pdf: install-pdf-recursive
576
577install-pdf-am:
578
579install-ps: install-ps-recursive
580
581install-ps-am:
582
583installcheck-am:
584
585maintainer-clean: maintainer-clean-recursive
586	-rm -f Makefile
587maintainer-clean-am: distclean-am maintainer-clean-generic
588
589mostlyclean: mostlyclean-recursive
590
591mostlyclean-am: mostlyclean-generic mostlyclean-libtool
592
593pdf: pdf-recursive
594
595pdf-am:
596
597ps: ps-recursive
598
599ps-am:
600
601uninstall-am:
602
603.MAKE: $(RECURSIVE_CLEAN_TARGETS) $(RECURSIVE_TARGETS) \
604	cscopelist-recursive ctags-recursive install-am install-strip \
605	tags-recursive
606
607.PHONY: $(RECURSIVE_CLEAN_TARGETS) $(RECURSIVE_TARGETS) CTAGS GTAGS \
608	all all-am check check-am clean clean-generic clean-libtool \
609	cscopelist cscopelist-recursive ctags ctags-recursive \
610	distclean distclean-generic distclean-libtool distclean-tags \
611	distdir dvi dvi-am html html-am info info-am install \
612	install-am install-data install-data-am install-dvi \
613	install-dvi-am install-exec install-exec-am install-html \
614	install-html-am install-info install-info-am install-man \
615	install-pdf install-pdf-am install-ps install-ps-am \
616	install-strip installcheck installcheck-am installdirs \
617	installdirs-am maintainer-clean maintainer-clean-generic \
618	mostlyclean mostlyclean-generic mostlyclean-libtool pdf pdf-am \
619	ps ps-am tags tags-recursive uninstall uninstall-am
620
621
622# Tell versions [3.59,3.63) of GNU make to not export all variables.
623# Otherwise a system limit (for SysV at least) may be exceeded.
624.NOEXPORT:
625