utils - OpenGrok cross reference for /dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/utils/

Name		Date	Size	#Lines	LOC
..		19-Feb-2021	-
R/	H	19-Feb-2021	-	121	97
activityprofile/	H	19-Feb-2021	-	733	543
baq/	H	19-Feb-2021	-	233	187
bigquery/	H	19-Feb-2021	-	121	85
bwa/	H	19-Feb-2021	-	41	37
clipping/	H	19-Feb-2021	-	475	365
codecs/	H	19-Feb-2021	-	5,114	4,491
collections/	H	19-Feb-2021	-	490	380
config/	H	19-Feb-2021	-	1,170	777
downsampling/	H	19-Feb-2021	-	1,256	962
dragstr/	H	19-Feb-2021	-	175	138
fasta/	H	19-Feb-2021	-	224	169
fragments/	H	19-Feb-2021	-	290	220
gcs/	H	19-Feb-2021	-	279	243
genotyper/	H	19-Feb-2021	-	1,699	1,283
haplotype/	H	19-Feb-2021	-	768	631
hdf5/	H	19-Feb-2021	-	266	226
help/	H	19-Feb-2021	-	630	479
io/	H	19-Feb-2021	-	923	728
iterators/	H	19-Feb-2021	-	706	525
locusiterator/	H	19-Feb-2021	-	1,561	1,151
logging/	H	19-Feb-2021	-	76	63
mcmc/	H	19-Feb-2021	-	1,230	820
nio/	H	19-Feb-2021	-	1,076	790
pairhmm/	H	19-Feb-2021	-	1,621	1,301
param/	H	19-Feb-2021	-	282	225
pileup/	H	19-Feb-2021	-	1,147	947
python/	H	19-Feb-2021	-	711	517
read/	H	19-Feb-2021	-	5,398	4,254
recalibration/	H	19-Feb-2021	-	1,795	1,418
reference/	H	19-Feb-2021	-	317	254
report/	H	19-Feb-2021	-	280	230
runtime/	H	19-Feb-2021	-	853	654
samples/	H	19-Feb-2021	-	852	667
smithwaterman/	H	19-Feb-2021	-	359	278
solver/	H	19-Feb-2021	-	152	113
spark/	H	19-Feb-2021	-	282	242
svd/	H	19-Feb-2021	-	81	62
test/	H	19-Feb-2021	-	497	275
text/	H	19-Feb-2021	-	65	55
tsv/	H	19-Feb-2021	-	2,162	1,822
variant/	H	19-Feb-2021	-	3,741	2,975
BaseUtilsUnitTest.java	H A D	19-Feb-2021	10.2 KiB	227	186
ClassUtilsUnitTest.java	H A D	19-Feb-2021	4.8 KiB	128	98
CompressedDataListUnitTest.java	H A D	19-Feb-2021	2.5 KiB	94	77
FisherExactTestUnitTest.java	H A D	19-Feb-2021	3 KiB	58	42
GenomeLocParserUnitTest.java	H A D	19-Feb-2021	23.6 KiB	558	465
GenomeLocSortedSetUnitTest.java	H A D	19-Feb-2021	15.7 KiB	356	289
GenomeLocUnitTest.java	H A D	19-Feb-2021	16.9 KiB	362	265
GenotypeUtilsUnitTest.java	H A D	19-Feb-2021	7.9 KiB	157	133
HistogramUnitTest.java	H A D	19-Feb-2021	2.3 KiB	80	64
IGVUtilsUnitTest.java	H A D	19-Feb-2021	1.3 KiB	37	25
IndexRangeUnitTest.java	H A D	19-Feb-2021	5.3 KiB	136	112
IndexUtilsUnitTest.java	H A D	19-Feb-2021	6.2 KiB	141	117
IntHistogramTest.java	H A D	19-Feb-2021	6.9 KiB	146	126
IntervalPileupUnitTest.java	H A D	19-Feb-2021	21.4 KiB	551	463
IntervalUtilsUnitTest.java	H A D	19-Feb-2021	115 KiB	2,231	1,781
MannWhitneyUUnitTest.java	H A D	19-Feb-2021	9.6 KiB	179	150
MathUtilsUnitTest.java	H A D	19-Feb-2021	48.5 KiB	1,149	925
MatrixSummaryUtilsUnitTest.java	H A D	19-Feb-2021	3.3 KiB	77	63
NGSPlatformUnitTest.java	H A D	19-Feb-2021	6.1 KiB	140	105
NucleotideUnitTest.java	H A D	19-Feb-2021	27.8 KiB	619	544
QualityUtilsUnitTest.java	H A D	19-Feb-2021	7.9 KiB	176	139
RandomDNA.java	H A D	19-Feb-2021	11.4 KiB	292	140
RandomDNAUnitTest.java	H A D	19-Feb-2021	9.6 KiB	254	214
SATagBuilderUnitTests.java	H A D	19-Feb-2021	9 KiB	183	147
SequenceDictionaryUtilsUnitTest.java	H A D	19-Feb-2021	33.9 KiB	357	285
SimpleIntervalUnitTest.java	H A D	19-Feb-2021	16.4 KiB	330	282
StringSplitSpeedUnitTest.java	H A D	19-Feb-2021	14.2 KiB	255	165
UnsignedTypeUtilTest.java	H A D	19-Feb-2021	2.5 KiB	76	62
UnvalidatingGenomeLoc.java	H A D	19-Feb-2021	793	21	7
UtilsUnitTest.java	H A D	19-Feb-2021	43.9 KiB	982	794
ZipUtilsTest.java	H A D	19-Feb-2021	9.2 KiB	219	191